BLASTX nr result
ID: Coptis24_contig00014214
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00014214
(817 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002306785.1| predicted protein [Populus trichocarpa] gi|2... 179 4e-61
ref|XP_003571794.1| PREDICTED: pentatricopeptide repeat-containi... 157 5e-53
dbj|BAJ92456.1| predicted protein [Hordeum vulgare subsp. vulgare] 162 6e-53
gb|EEE50980.1| hypothetical protein OsJ_31564 [Oryza sativa Japo... 164 4e-52
gb|EEC66971.1| hypothetical protein OsI_33631 [Oryza sativa Indi... 164 4e-52
>ref|XP_002306785.1| predicted protein [Populus trichocarpa] gi|222856234|gb|EEE93781.1|
predicted protein [Populus trichocarpa]
Length = 750
Score = 179 bits (455), Expect(2) = 4e-61
Identities = 90/141 (63%), Positives = 115/141 (81%)
Frame = +1
Query: 226 RDRNYVGLEAEAKETLDLLLENLQNRVELVTSECGILQPTEFFYAKLVKSFLEACKVKEL 405
RDRN++ L+ EAKE L LL LQ +VEL+T+E GILQPTE Y KLVK+FLE+ K KEL
Sbjct: 377 RDRNFLKLDTEAKEVLSTLLVELQMQVELITTERGILQPTEKIYVKLVKAFLESGKTKEL 436
Query: 406 AEFLIQADKEGAPVAIENSAVVHVISACILLGWLDQAHDLIDEMRFAGIRTGSSVYSALP 585
A FLI+A+KE +P + ++SA+VHVI++CI LGWLDQAHDL+DEM AGIRT SSVY++L
Sbjct: 437 AAFLIKAEKEDSPASNDDSALVHVINSCISLGWLDQAHDLLDEMCLAGIRTSSSVYASLL 496
Query: 586 KAYCKENRPLEISSLLRDARK 648
KAYCK N+ E+++LLRDAR+
Sbjct: 497 KAYCKANQTGEVTALLRDARR 517
Score = 82.0 bits (201), Expect(2) = 4e-61
Identities = 38/54 (70%), Positives = 47/54 (87%)
Frame = +3
Query: 651 GIQLDSSCYEALIQSRVLEQDTQGALHLFKEMKETKISKTCHEEFDMLVKGCAE 812
GIQLDSS Y ALI+ RV+++DT+ ALH+FKEMKE KI +T H+EF+MLVKGCAE
Sbjct: 519 GIQLDSSSYNALIEFRVIQKDTKEALHIFKEMKEAKIPRTGHQEFEMLVKGCAE 572
>ref|XP_003571794.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03100,
mitochondrial-like [Brachypodium distachyon]
Length = 806
Score = 157 bits (396), Expect(2) = 5e-53
Identities = 80/142 (56%), Positives = 113/142 (79%), Gaps = 1/142 (0%)
Frame = +1
Query: 226 RDRNYVGLEAEAKETLDLLLENLQNRVELVTSECGILQPTEFFYAKLVKSFLEACKVKEL 405
+D+++ LE +A+ L+LL + LQ++V LV SE GIL PTE YAKLVK+FLEA K+ L
Sbjct: 433 KDKSFARLELDARGLLNLLSDKLQDQVGLVKSEHGILHPTETMYAKLVKAFLEADKISAL 492
Query: 406 AEFLIQADKEGAPVAIENSAVVHVISACILLGWLDQAHDLIDEMRFAGIRTGSSVYSALP 585
A FL++A KE +PV++E+S VV VI+ACI +G L+QAHDL+DEMRF+GI+ GSS+YS+L
Sbjct: 493 ASFLVKASKEDSPVSVESSFVVQVINACISVGLLEQAHDLLDEMRFSGIKVGSSIYSSLL 552
Query: 586 KAYCKE-NRPLEISSLLRDARK 648
KAYCKE + +I++LL+DA++
Sbjct: 553 KAYCKEGHHEDDITALLKDAQQ 574
Score = 77.8 bits (190), Expect(2) = 5e-53
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = +3
Query: 645 QEGIQLDSSCYEALIQSRVLEQDTQGALHLFKEMKETKISKTCHEEFDMLVKGCAES 815
Q GIQLDSSCYE LIQSRV ++T GALHLFKEM+ +K+ K+ H EF+MLV+ C S
Sbjct: 574 QAGIQLDSSCYEDLIQSRVHHKNTAGALHLFKEMRNSKVVKSGHREFEMLVQSCDNS 630
>dbj|BAJ92456.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 775
Score = 162 bits (410), Expect(2) = 6e-53
Identities = 83/142 (58%), Positives = 112/142 (78%), Gaps = 1/142 (0%)
Frame = +1
Query: 226 RDRNYVGLEAEAKETLDLLLENLQNRVELVTSECGILQPTEFFYAKLVKSFLEACKVKEL 405
+D+++ LE EA+E L LL + LQ +V LV SE G+L PTE YAKLVK+FLEA K+ L
Sbjct: 402 KDKSFARLELEARELLKLLSDKLQGQVGLVKSEHGVLHPTETTYAKLVKTFLEADKISAL 461
Query: 406 AEFLIQADKEGAPVAIENSAVVHVISACILLGWLDQAHDLIDEMRFAGIRTGSSVYSALP 585
A FL++A KE +PV++E+S VV VI+ACI LG L+QAHDL+DEMRF+G+R GSS+YS+L
Sbjct: 462 ASFLVKASKEDSPVSVESSFVVQVINACISLGLLEQAHDLLDEMRFSGVRVGSSIYSSLL 521
Query: 586 KAYCKE-NRPLEISSLLRDARK 648
KAYCKE N +I++LL+DA++
Sbjct: 522 KAYCKEGNHEDDITALLKDAQQ 543
Score = 72.0 bits (175), Expect(2) = 6e-53
Identities = 34/54 (62%), Positives = 41/54 (75%)
Frame = +3
Query: 645 QEGIQLDSSCYEALIQSRVLEQDTQGALHLFKEMKETKISKTCHEEFDMLVKGC 806
Q GIQLDSSCYE LI+SR +T GALHLFKEMK + I K+ + EF+MLV+ C
Sbjct: 543 QAGIQLDSSCYEDLIKSRAHHNNTTGALHLFKEMKSSNIKKSVNREFEMLVQSC 596
>gb|EEE50980.1| hypothetical protein OsJ_31564 [Oryza sativa Japonica Group]
Length = 800
Score = 164 bits (416), Expect(2) = 4e-52
Identities = 83/142 (58%), Positives = 113/142 (79%), Gaps = 1/142 (0%)
Frame = +1
Query: 226 RDRNYVGLEAEAKETLDLLLENLQNRVELVTSECGILQPTEFFYAKLVKSFLEACKVKEL 405
+D+++ LE +A+E L LL + LQ +V LV SE GIL PTE YAKLVK+FLEA K+ L
Sbjct: 406 KDKSFARLELDARELLKLLSDKLQEQVGLVKSEYGILYPTETMYAKLVKAFLEANKISAL 465
Query: 406 AEFLIQADKEGAPVAIENSAVVHVISACILLGWLDQAHDLIDEMRFAGIRTGSSVYSALP 585
A FL++A KE +PV++E+S VV VI+ACI LGWL+QAHDL+DEMRF+GIR GS++YS+L
Sbjct: 466 ASFLVKASKEDSPVSVESSFVVQVINACISLGWLEQAHDLLDEMRFSGIRVGSTIYSSLL 525
Query: 586 KAYCKE-NRPLEISSLLRDARK 648
KAYCKE + +I++LL+DA++
Sbjct: 526 KAYCKEGHHEDDIAALLKDAQQ 547
Score = 67.0 bits (162), Expect(2) = 4e-52
Identities = 33/54 (61%), Positives = 38/54 (70%)
Frame = +3
Query: 645 QEGIQLDSSCYEALIQSRVLEQDTQGALHLFKEMKETKISKTCHEEFDMLVKGC 806
Q GIQLD SCYE LIQSR +T GAL+LFKE+K I K EF+MLV+GC
Sbjct: 547 QAGIQLDPSCYEDLIQSRAHHNNTTGALNLFKELKSLNILKAGQNEFEMLVQGC 600
>gb|EEC66971.1| hypothetical protein OsI_33631 [Oryza sativa Indica Group]
Length = 800
Score = 164 bits (416), Expect(2) = 4e-52
Identities = 83/142 (58%), Positives = 113/142 (79%), Gaps = 1/142 (0%)
Frame = +1
Query: 226 RDRNYVGLEAEAKETLDLLLENLQNRVELVTSECGILQPTEFFYAKLVKSFLEACKVKEL 405
+D+++ LE +A+E L LL + LQ +V LV SE GIL PTE YAKLVK+FLEA K+ L
Sbjct: 406 KDKSFARLELDARELLKLLSDKLQEQVGLVKSEYGILYPTETMYAKLVKAFLEANKISAL 465
Query: 406 AEFLIQADKEGAPVAIENSAVVHVISACILLGWLDQAHDLIDEMRFAGIRTGSSVYSALP 585
A FL++A KE +PV++E+S VV VI+ACI LGWL+QAHDL+DEMRF+GIR GS++YS+L
Sbjct: 466 ASFLVKASKEDSPVSVESSFVVQVINACISLGWLEQAHDLLDEMRFSGIRVGSTIYSSLL 525
Query: 586 KAYCKE-NRPLEISSLLRDARK 648
KAYCKE + +I++LL+DA++
Sbjct: 526 KAYCKEGHHEDDIAALLKDAQQ 547
Score = 67.0 bits (162), Expect(2) = 4e-52
Identities = 33/54 (61%), Positives = 38/54 (70%)
Frame = +3
Query: 645 QEGIQLDSSCYEALIQSRVLEQDTQGALHLFKEMKETKISKTCHEEFDMLVKGC 806
Q GIQLD SCYE LIQSR +T GAL+LFKE+K I K EF+MLV+GC
Sbjct: 547 QAGIQLDPSCYEDLIQSRAHHNNTTGALNLFKELKSLNILKAGQNEFEMLVQGC 600