BLASTX nr result

ID: Coptis24_contig00014214 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014214
         (817 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306785.1| predicted protein [Populus trichocarpa] gi|2...   179   4e-61
ref|XP_003571794.1| PREDICTED: pentatricopeptide repeat-containi...   157   5e-53
dbj|BAJ92456.1| predicted protein [Hordeum vulgare subsp. vulgare]    162   6e-53
gb|EEE50980.1| hypothetical protein OsJ_31564 [Oryza sativa Japo...   164   4e-52
gb|EEC66971.1| hypothetical protein OsI_33631 [Oryza sativa Indi...   164   4e-52

>ref|XP_002306785.1| predicted protein [Populus trichocarpa] gi|222856234|gb|EEE93781.1|
           predicted protein [Populus trichocarpa]
          Length = 750

 Score =  179 bits (455), Expect(2) = 4e-61
 Identities = 90/141 (63%), Positives = 115/141 (81%)
 Frame = +1

Query: 226 RDRNYVGLEAEAKETLDLLLENLQNRVELVTSECGILQPTEFFYAKLVKSFLEACKVKEL 405
           RDRN++ L+ EAKE L  LL  LQ +VEL+T+E GILQPTE  Y KLVK+FLE+ K KEL
Sbjct: 377 RDRNFLKLDTEAKEVLSTLLVELQMQVELITTERGILQPTEKIYVKLVKAFLESGKTKEL 436

Query: 406 AEFLIQADKEGAPVAIENSAVVHVISACILLGWLDQAHDLIDEMRFAGIRTGSSVYSALP 585
           A FLI+A+KE +P + ++SA+VHVI++CI LGWLDQAHDL+DEM  AGIRT SSVY++L 
Sbjct: 437 AAFLIKAEKEDSPASNDDSALVHVINSCISLGWLDQAHDLLDEMCLAGIRTSSSVYASLL 496

Query: 586 KAYCKENRPLEISSLLRDARK 648
           KAYCK N+  E+++LLRDAR+
Sbjct: 497 KAYCKANQTGEVTALLRDARR 517



 Score = 82.0 bits (201), Expect(2) = 4e-61
 Identities = 38/54 (70%), Positives = 47/54 (87%)
 Frame = +3

Query: 651 GIQLDSSCYEALIQSRVLEQDTQGALHLFKEMKETKISKTCHEEFDMLVKGCAE 812
           GIQLDSS Y ALI+ RV+++DT+ ALH+FKEMKE KI +T H+EF+MLVKGCAE
Sbjct: 519 GIQLDSSSYNALIEFRVIQKDTKEALHIFKEMKEAKIPRTGHQEFEMLVKGCAE 572


>ref|XP_003571794.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 806

 Score =  157 bits (396), Expect(2) = 5e-53
 Identities = 80/142 (56%), Positives = 113/142 (79%), Gaps = 1/142 (0%)
 Frame = +1

Query: 226 RDRNYVGLEAEAKETLDLLLENLQNRVELVTSECGILQPTEFFYAKLVKSFLEACKVKEL 405
           +D+++  LE +A+  L+LL + LQ++V LV SE GIL PTE  YAKLVK+FLEA K+  L
Sbjct: 433 KDKSFARLELDARGLLNLLSDKLQDQVGLVKSEHGILHPTETMYAKLVKAFLEADKISAL 492

Query: 406 AEFLIQADKEGAPVAIENSAVVHVISACILLGWLDQAHDLIDEMRFAGIRTGSSVYSALP 585
           A FL++A KE +PV++E+S VV VI+ACI +G L+QAHDL+DEMRF+GI+ GSS+YS+L 
Sbjct: 493 ASFLVKASKEDSPVSVESSFVVQVINACISVGLLEQAHDLLDEMRFSGIKVGSSIYSSLL 552

Query: 586 KAYCKE-NRPLEISSLLRDARK 648
           KAYCKE +   +I++LL+DA++
Sbjct: 553 KAYCKEGHHEDDITALLKDAQQ 574



 Score = 77.8 bits (190), Expect(2) = 5e-53
 Identities = 37/57 (64%), Positives = 45/57 (78%)
 Frame = +3

Query: 645 QEGIQLDSSCYEALIQSRVLEQDTQGALHLFKEMKETKISKTCHEEFDMLVKGCAES 815
           Q GIQLDSSCYE LIQSRV  ++T GALHLFKEM+ +K+ K+ H EF+MLV+ C  S
Sbjct: 574 QAGIQLDSSCYEDLIQSRVHHKNTAGALHLFKEMRNSKVVKSGHREFEMLVQSCDNS 630


>dbj|BAJ92456.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 775

 Score =  162 bits (410), Expect(2) = 6e-53
 Identities = 83/142 (58%), Positives = 112/142 (78%), Gaps = 1/142 (0%)
 Frame = +1

Query: 226 RDRNYVGLEAEAKETLDLLLENLQNRVELVTSECGILQPTEFFYAKLVKSFLEACKVKEL 405
           +D+++  LE EA+E L LL + LQ +V LV SE G+L PTE  YAKLVK+FLEA K+  L
Sbjct: 402 KDKSFARLELEARELLKLLSDKLQGQVGLVKSEHGVLHPTETTYAKLVKTFLEADKISAL 461

Query: 406 AEFLIQADKEGAPVAIENSAVVHVISACILLGWLDQAHDLIDEMRFAGIRTGSSVYSALP 585
           A FL++A KE +PV++E+S VV VI+ACI LG L+QAHDL+DEMRF+G+R GSS+YS+L 
Sbjct: 462 ASFLVKASKEDSPVSVESSFVVQVINACISLGLLEQAHDLLDEMRFSGVRVGSSIYSSLL 521

Query: 586 KAYCKE-NRPLEISSLLRDARK 648
           KAYCKE N   +I++LL+DA++
Sbjct: 522 KAYCKEGNHEDDITALLKDAQQ 543



 Score = 72.0 bits (175), Expect(2) = 6e-53
 Identities = 34/54 (62%), Positives = 41/54 (75%)
 Frame = +3

Query: 645 QEGIQLDSSCYEALIQSRVLEQDTQGALHLFKEMKETKISKTCHEEFDMLVKGC 806
           Q GIQLDSSCYE LI+SR    +T GALHLFKEMK + I K+ + EF+MLV+ C
Sbjct: 543 QAGIQLDSSCYEDLIKSRAHHNNTTGALHLFKEMKSSNIKKSVNREFEMLVQSC 596


>gb|EEE50980.1| hypothetical protein OsJ_31564 [Oryza sativa Japonica Group]
          Length = 800

 Score =  164 bits (416), Expect(2) = 4e-52
 Identities = 83/142 (58%), Positives = 113/142 (79%), Gaps = 1/142 (0%)
 Frame = +1

Query: 226 RDRNYVGLEAEAKETLDLLLENLQNRVELVTSECGILQPTEFFYAKLVKSFLEACKVKEL 405
           +D+++  LE +A+E L LL + LQ +V LV SE GIL PTE  YAKLVK+FLEA K+  L
Sbjct: 406 KDKSFARLELDARELLKLLSDKLQEQVGLVKSEYGILYPTETMYAKLVKAFLEANKISAL 465

Query: 406 AEFLIQADKEGAPVAIENSAVVHVISACILLGWLDQAHDLIDEMRFAGIRTGSSVYSALP 585
           A FL++A KE +PV++E+S VV VI+ACI LGWL+QAHDL+DEMRF+GIR GS++YS+L 
Sbjct: 466 ASFLVKASKEDSPVSVESSFVVQVINACISLGWLEQAHDLLDEMRFSGIRVGSTIYSSLL 525

Query: 586 KAYCKE-NRPLEISSLLRDARK 648
           KAYCKE +   +I++LL+DA++
Sbjct: 526 KAYCKEGHHEDDIAALLKDAQQ 547



 Score = 67.0 bits (162), Expect(2) = 4e-52
 Identities = 33/54 (61%), Positives = 38/54 (70%)
 Frame = +3

Query: 645 QEGIQLDSSCYEALIQSRVLEQDTQGALHLFKEMKETKISKTCHEEFDMLVKGC 806
           Q GIQLD SCYE LIQSR    +T GAL+LFKE+K   I K    EF+MLV+GC
Sbjct: 547 QAGIQLDPSCYEDLIQSRAHHNNTTGALNLFKELKSLNILKAGQNEFEMLVQGC 600


>gb|EEC66971.1| hypothetical protein OsI_33631 [Oryza sativa Indica Group]
          Length = 800

 Score =  164 bits (416), Expect(2) = 4e-52
 Identities = 83/142 (58%), Positives = 113/142 (79%), Gaps = 1/142 (0%)
 Frame = +1

Query: 226 RDRNYVGLEAEAKETLDLLLENLQNRVELVTSECGILQPTEFFYAKLVKSFLEACKVKEL 405
           +D+++  LE +A+E L LL + LQ +V LV SE GIL PTE  YAKLVK+FLEA K+  L
Sbjct: 406 KDKSFARLELDARELLKLLSDKLQEQVGLVKSEYGILYPTETMYAKLVKAFLEANKISAL 465

Query: 406 AEFLIQADKEGAPVAIENSAVVHVISACILLGWLDQAHDLIDEMRFAGIRTGSSVYSALP 585
           A FL++A KE +PV++E+S VV VI+ACI LGWL+QAHDL+DEMRF+GIR GS++YS+L 
Sbjct: 466 ASFLVKASKEDSPVSVESSFVVQVINACISLGWLEQAHDLLDEMRFSGIRVGSTIYSSLL 525

Query: 586 KAYCKE-NRPLEISSLLRDARK 648
           KAYCKE +   +I++LL+DA++
Sbjct: 526 KAYCKEGHHEDDIAALLKDAQQ 547



 Score = 67.0 bits (162), Expect(2) = 4e-52
 Identities = 33/54 (61%), Positives = 38/54 (70%)
 Frame = +3

Query: 645 QEGIQLDSSCYEALIQSRVLEQDTQGALHLFKEMKETKISKTCHEEFDMLVKGC 806
           Q GIQLD SCYE LIQSR    +T GAL+LFKE+K   I K    EF+MLV+GC
Sbjct: 547 QAGIQLDPSCYEDLIQSRAHHNNTTGALNLFKELKSLNILKAGQNEFEMLVQGC 600


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