BLASTX nr result
ID: Coptis24_contig00014210
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00014210
(461 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002297812.1| predicted protein [Populus trichocarpa] gi|2... 101 5e-20
ref|XP_002285669.1| PREDICTED: uncharacterized protein LOC100259... 97 2e-18
emb|CBI33363.3| unnamed protein product [Vitis vinifera] 97 2e-18
ref|XP_002870363.1| predicted protein [Arabidopsis lyrata subsp.... 91 7e-17
ref|XP_002518117.1| conserved hypothetical protein [Ricinus comm... 91 1e-16
>ref|XP_002297812.1| predicted protein [Populus trichocarpa] gi|222845070|gb|EEE82617.1|
predicted protein [Populus trichocarpa]
Length = 395
Score = 101 bits (252), Expect = 5e-20
Identities = 50/81 (61%), Positives = 60/81 (74%)
Frame = +2
Query: 2 SVASVTEVLEIKQNVIKENEVAEFEASHHRVFLLGENRWEDSSRLVGRNKEVSASMVGIS 181
+V SVTE+ EI Q V+KE EV E + SHHRVFLLGENRWE+ SRL GR K+VS S S
Sbjct: 277 AVTSVTEISEIHQKVVKE-EVTEVDVSHHRVFLLGENRWEEPSRLNGRKKQVSGSKTKDS 335
Query: 182 TTKCIACRGEGRVLCTGTSGS 244
T +C+ CRGEGR+LCT G+
Sbjct: 336 TKQCLTCRGEGRLLCTECDGT 356
>ref|XP_002285669.1| PREDICTED: uncharacterized protein LOC100259626 [Vitis vinifera]
Length = 372
Score = 96.7 bits (239), Expect = 2e-18
Identities = 46/80 (57%), Positives = 58/80 (72%)
Frame = +2
Query: 5 VASVTEVLEIKQNVIKENEVAEFEASHHRVFLLGENRWEDSSRLVGRNKEVSASMVGIST 184
VASVTE+ EI+Q V+KE E E S RVFLLGENRWE+ SRLVGR+K+ + +T
Sbjct: 254 VASVTEISEIQQKVLKEEGFTEVEVSQQRVFLLGENRWEEPSRLVGRDKKGGGNKPKDAT 313
Query: 185 TKCIACRGEGRVLCTGTSGS 244
TKC+ CRGEGR++CT G+
Sbjct: 314 TKCLTCRGEGRLMCTECDGT 333
Score = 39.7 bits (91), Expect(3) = 2e-12
Identities = 27/53 (50%), Positives = 31/53 (58%), Gaps = 14/53 (26%)
Frame = +1
Query: 343 ACEDGIMTAELLEKLFMEQGA--------VDPNFH------ESTNGASVASVT 459
A E+GIMTAELLE+LFMEQ +DP + E NGA VASVT
Sbjct: 206 APENGIMTAELLERLFMEQHIEAAGLKRNIDPKENDASPPKEGVNGALVASVT 258
Score = 39.3 bits (90), Expect(3) = 2e-12
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 18/102 (17%)
Frame = +3
Query: 54 KMKLQNLRHLTTVSSFLERIG------------------GKIHPDLWAETKRFQQAWWGF 179
K ++Q L H ++VS+ + I G + E+K ++ G
Sbjct: 90 KFRIQQLEHQSSVSASIPDIAALLQLPKDSAEVARIAESGSSALPMVLESKEVKEEKVGD 149
Query: 180 QQQSVLLVVGRGAYYAQERQEAFQKLGFYSSEKDMAWSSLAS 305
Q++ L VG + QEA Q LGFYS E+D+ +SS +S
Sbjct: 150 QKKRKTLRVGSEGEEVRAMQEALQNLGFYSGEEDVEFSSFSS 191
Score = 37.7 bits (86), Expect(3) = 2e-12
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +2
Query: 287 LEFSSFSSGTDRAVKTWQ 340
+EFSSFSSGT+RAVKTWQ
Sbjct: 184 VEFSSFSSGTERAVKTWQ 201
>emb|CBI33363.3| unnamed protein product [Vitis vinifera]
Length = 238
Score = 96.7 bits (239), Expect = 2e-18
Identities = 46/80 (57%), Positives = 58/80 (72%)
Frame = +2
Query: 5 VASVTEVLEIKQNVIKENEVAEFEASHHRVFLLGENRWEDSSRLVGRNKEVSASMVGIST 184
VASVTE+ EI+Q V+KE E E S RVFLLGENRWE+ SRLVGR+K+ + +T
Sbjct: 120 VASVTEISEIQQKVLKEEGFTEVEVSQQRVFLLGENRWEEPSRLVGRDKKGGGNKPKDAT 179
Query: 185 TKCIACRGEGRVLCTGTSGS 244
TKC+ CRGEGR++CT G+
Sbjct: 180 TKCLTCRGEGRLMCTECDGT 199
Score = 39.7 bits (91), Expect(3) = 3e-12
Identities = 27/53 (50%), Positives = 31/53 (58%), Gaps = 14/53 (26%)
Frame = +1
Query: 343 ACEDGIMTAELLEKLFMEQGA--------VDPNFH------ESTNGASVASVT 459
A E+GIMTAELLE+LFMEQ +DP + E NGA VASVT
Sbjct: 72 APENGIMTAELLERLFMEQHIEAAGLKRNIDPKENDASPPKEGVNGALVASVT 124
Score = 38.1 bits (87), Expect(3) = 3e-12
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +3
Query: 144 ETKRFQQAWWGFQQQSVLLVVGRGAYYAQERQEAFQKLGFYSSEKDMAWSSLAS 305
E+K ++ G Q++ L VG + QEA Q LGFYS E+D+ +SS +S
Sbjct: 4 ESKEVKEEKVGDQKKRKTLRVGSEGEEVRAMQEALQNLGFYSGEEDVEFSSFSS 57
Score = 37.7 bits (86), Expect(3) = 3e-12
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +2
Query: 287 LEFSSFSSGTDRAVKTWQ 340
+EFSSFSSGT+RAVKTWQ
Sbjct: 50 VEFSSFSSGTERAVKTWQ 67
>ref|XP_002870363.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297316199|gb|EFH46622.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 394
Score = 91.3 bits (225), Expect = 7e-17
Identities = 42/79 (53%), Positives = 58/79 (73%)
Frame = +2
Query: 8 ASVTEVLEIKQNVIKENEVAEFEASHHRVFLLGENRWEDSSRLVGRNKEVSASMVGISTT 187
+SVT+V E KQ++IK+ E + + +RV+LLGENRWED SRL+GRNK V +S I+ T
Sbjct: 277 SSVTQVPEKKQSIIKDQSNREDDVTQNRVYLLGENRWEDPSRLIGRNKPVDSSKSTITKT 336
Query: 188 KCIACRGEGRVLCTGTSGS 244
+CI CRGEGR++C G+
Sbjct: 337 RCITCRGEGRLMCLECDGT 355
Score = 35.0 bits (79), Expect(3) = 6e-09
Identities = 19/36 (52%), Positives = 22/36 (61%)
Frame = +3
Query: 198 LVVGRGAYYAQERQEAFQKLGFYSSEKDMAWSSLAS 305
L VG Q QEA KLGFYS E+DM +SS +S
Sbjct: 185 LKVGSEGDDVQALQEALLKLGFYSGEEDMEFSSFSS 220
Score = 35.0 bits (79), Expect(3) = 6e-09
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 7/44 (15%)
Frame = +1
Query: 349 EDGIMTAELLEKLFMEQG-------AVDPNFHESTNGASVASVT 459
EDGIMTAELL++LFM++ A E++NG+ +SVT
Sbjct: 237 EDGIMTAELLQRLFMDEDVETDKDEASTMKKEEASNGSVFSSVT 280
Score = 34.3 bits (77), Expect(3) = 6e-09
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 287 LEFSSFSSGTDRAVKTWQ 340
+EFSSFSSGT AVKTWQ
Sbjct: 213 MEFSSFSSGTASAVKTWQ 230
>ref|XP_002518117.1| conserved hypothetical protein [Ricinus communis]
gi|223542713|gb|EEF44250.1| conserved hypothetical
protein [Ricinus communis]
Length = 386
Score = 90.9 bits (224), Expect = 1e-16
Identities = 43/81 (53%), Positives = 59/81 (72%)
Frame = +2
Query: 2 SVASVTEVLEIKQNVIKENEVAEFEASHHRVFLLGENRWEDSSRLVGRNKEVSASMVGIS 181
+VAS+TE+ E +Q ++K+ V E + S RVFLLGENRWE+ SRLV ++K+V S S
Sbjct: 268 AVASITEISETQQKIVKDG-VTEVKGSQQRVFLLGENRWEEPSRLVSKDKQVGVSKPKDS 326
Query: 182 TTKCIACRGEGRVLCTGTSGS 244
TKC++CRGEGR+LCT G+
Sbjct: 327 MTKCLSCRGEGRLLCTECDGT 347
Score = 38.1 bits (87), Expect(3) = 3e-10
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +2
Query: 287 LEFSSFSSGTDRAVKTWQ 340
+EFSSFSSGT+RAVKTWQ
Sbjct: 198 MEFSSFSSGTERAVKTWQ 215
Score = 36.6 bits (83), Expect(3) = 3e-10
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 15/54 (27%)
Frame = +1
Query: 343 ACEDGIMTAELLEKLFM---------------EQGAVDPNFHESTNGASVASVT 459
A EDGIMTAELLE+L++ ++ ++ + ES NGA+VAS+T
Sbjct: 220 APEDGIMTAELLERLYVGQQNKVTGSTISIDQKESSLTVSQKESANGAAVASIT 273
Score = 33.9 bits (76), Expect(3) = 3e-10
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +3
Query: 180 QQQSVLLVVGRGAYYAQERQEAFQKLGFYSSEKDMAWSSLAS 305
+++ + L G +E QEA LGFYS E+DM +SS +S
Sbjct: 164 EKRRITLRKGSEGDEVREMQEALLNLGFYSGEEDMEFSSFSS 205