BLASTX nr result

ID: Coptis24_contig00014210 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014210
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297812.1| predicted protein [Populus trichocarpa] gi|2...   101   5e-20
ref|XP_002285669.1| PREDICTED: uncharacterized protein LOC100259...    97   2e-18
emb|CBI33363.3| unnamed protein product [Vitis vinifera]               97   2e-18
ref|XP_002870363.1| predicted protein [Arabidopsis lyrata subsp....    91   7e-17
ref|XP_002518117.1| conserved hypothetical protein [Ricinus comm...    91   1e-16

>ref|XP_002297812.1| predicted protein [Populus trichocarpa] gi|222845070|gb|EEE82617.1|
           predicted protein [Populus trichocarpa]
          Length = 395

 Score =  101 bits (252), Expect = 5e-20
 Identities = 50/81 (61%), Positives = 60/81 (74%)
 Frame = +2

Query: 2   SVASVTEVLEIKQNVIKENEVAEFEASHHRVFLLGENRWEDSSRLVGRNKEVSASMVGIS 181
           +V SVTE+ EI Q V+KE EV E + SHHRVFLLGENRWE+ SRL GR K+VS S    S
Sbjct: 277 AVTSVTEISEIHQKVVKE-EVTEVDVSHHRVFLLGENRWEEPSRLNGRKKQVSGSKTKDS 335

Query: 182 TTKCIACRGEGRVLCTGTSGS 244
           T +C+ CRGEGR+LCT   G+
Sbjct: 336 TKQCLTCRGEGRLLCTECDGT 356


>ref|XP_002285669.1| PREDICTED: uncharacterized protein LOC100259626 [Vitis vinifera]
          Length = 372

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 46/80 (57%), Positives = 58/80 (72%)
 Frame = +2

Query: 5   VASVTEVLEIKQNVIKENEVAEFEASHHRVFLLGENRWEDSSRLVGRNKEVSASMVGIST 184
           VASVTE+ EI+Q V+KE    E E S  RVFLLGENRWE+ SRLVGR+K+   +    +T
Sbjct: 254 VASVTEISEIQQKVLKEEGFTEVEVSQQRVFLLGENRWEEPSRLVGRDKKGGGNKPKDAT 313

Query: 185 TKCIACRGEGRVLCTGTSGS 244
           TKC+ CRGEGR++CT   G+
Sbjct: 314 TKCLTCRGEGRLMCTECDGT 333



 Score = 39.7 bits (91), Expect(3) = 2e-12
 Identities = 27/53 (50%), Positives = 31/53 (58%), Gaps = 14/53 (26%)
 Frame = +1

Query: 343 ACEDGIMTAELLEKLFMEQGA--------VDPNFH------ESTNGASVASVT 459
           A E+GIMTAELLE+LFMEQ          +DP  +      E  NGA VASVT
Sbjct: 206 APENGIMTAELLERLFMEQHIEAAGLKRNIDPKENDASPPKEGVNGALVASVT 258



 Score = 39.3 bits (90), Expect(3) = 2e-12
 Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 18/102 (17%)
 Frame = +3

Query: 54  KMKLQNLRHLTTVSSFLERIG------------------GKIHPDLWAETKRFQQAWWGF 179
           K ++Q L H ++VS+ +  I                   G     +  E+K  ++   G 
Sbjct: 90  KFRIQQLEHQSSVSASIPDIAALLQLPKDSAEVARIAESGSSALPMVLESKEVKEEKVGD 149

Query: 180 QQQSVLLVVGRGAYYAQERQEAFQKLGFYSSEKDMAWSSLAS 305
           Q++   L VG      +  QEA Q LGFYS E+D+ +SS +S
Sbjct: 150 QKKRKTLRVGSEGEEVRAMQEALQNLGFYSGEEDVEFSSFSS 191



 Score = 37.7 bits (86), Expect(3) = 2e-12
 Identities = 16/18 (88%), Positives = 18/18 (100%)
 Frame = +2

Query: 287 LEFSSFSSGTDRAVKTWQ 340
           +EFSSFSSGT+RAVKTWQ
Sbjct: 184 VEFSSFSSGTERAVKTWQ 201


>emb|CBI33363.3| unnamed protein product [Vitis vinifera]
          Length = 238

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 46/80 (57%), Positives = 58/80 (72%)
 Frame = +2

Query: 5   VASVTEVLEIKQNVIKENEVAEFEASHHRVFLLGENRWEDSSRLVGRNKEVSASMVGIST 184
           VASVTE+ EI+Q V+KE    E E S  RVFLLGENRWE+ SRLVGR+K+   +    +T
Sbjct: 120 VASVTEISEIQQKVLKEEGFTEVEVSQQRVFLLGENRWEEPSRLVGRDKKGGGNKPKDAT 179

Query: 185 TKCIACRGEGRVLCTGTSGS 244
           TKC+ CRGEGR++CT   G+
Sbjct: 180 TKCLTCRGEGRLMCTECDGT 199



 Score = 39.7 bits (91), Expect(3) = 3e-12
 Identities = 27/53 (50%), Positives = 31/53 (58%), Gaps = 14/53 (26%)
 Frame = +1

Query: 343 ACEDGIMTAELLEKLFMEQGA--------VDPNFH------ESTNGASVASVT 459
           A E+GIMTAELLE+LFMEQ          +DP  +      E  NGA VASVT
Sbjct: 72  APENGIMTAELLERLFMEQHIEAAGLKRNIDPKENDASPPKEGVNGALVASVT 124



 Score = 38.1 bits (87), Expect(3) = 3e-12
 Identities = 21/54 (38%), Positives = 31/54 (57%)
 Frame = +3

Query: 144 ETKRFQQAWWGFQQQSVLLVVGRGAYYAQERQEAFQKLGFYSSEKDMAWSSLAS 305
           E+K  ++   G Q++   L VG      +  QEA Q LGFYS E+D+ +SS +S
Sbjct: 4   ESKEVKEEKVGDQKKRKTLRVGSEGEEVRAMQEALQNLGFYSGEEDVEFSSFSS 57



 Score = 37.7 bits (86), Expect(3) = 3e-12
 Identities = 16/18 (88%), Positives = 18/18 (100%)
 Frame = +2

Query: 287 LEFSSFSSGTDRAVKTWQ 340
           +EFSSFSSGT+RAVKTWQ
Sbjct: 50  VEFSSFSSGTERAVKTWQ 67


>ref|XP_002870363.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316199|gb|EFH46622.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 394

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 42/79 (53%), Positives = 58/79 (73%)
 Frame = +2

Query: 8   ASVTEVLEIKQNVIKENEVAEFEASHHRVFLLGENRWEDSSRLVGRNKEVSASMVGISTT 187
           +SVT+V E KQ++IK+    E + + +RV+LLGENRWED SRL+GRNK V +S   I+ T
Sbjct: 277 SSVTQVPEKKQSIIKDQSNREDDVTQNRVYLLGENRWEDPSRLIGRNKPVDSSKSTITKT 336

Query: 188 KCIACRGEGRVLCTGTSGS 244
           +CI CRGEGR++C    G+
Sbjct: 337 RCITCRGEGRLMCLECDGT 355



 Score = 35.0 bits (79), Expect(3) = 6e-09
 Identities = 19/36 (52%), Positives = 22/36 (61%)
 Frame = +3

Query: 198 LVVGRGAYYAQERQEAFQKLGFYSSEKDMAWSSLAS 305
           L VG      Q  QEA  KLGFYS E+DM +SS +S
Sbjct: 185 LKVGSEGDDVQALQEALLKLGFYSGEEDMEFSSFSS 220



 Score = 35.0 bits (79), Expect(3) = 6e-09
 Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 7/44 (15%)
 Frame = +1

Query: 349 EDGIMTAELLEKLFMEQG-------AVDPNFHESTNGASVASVT 459
           EDGIMTAELL++LFM++        A      E++NG+  +SVT
Sbjct: 237 EDGIMTAELLQRLFMDEDVETDKDEASTMKKEEASNGSVFSSVT 280



 Score = 34.3 bits (77), Expect(3) = 6e-09
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = +2

Query: 287 LEFSSFSSGTDRAVKTWQ 340
           +EFSSFSSGT  AVKTWQ
Sbjct: 213 MEFSSFSSGTASAVKTWQ 230


>ref|XP_002518117.1| conserved hypothetical protein [Ricinus communis]
           gi|223542713|gb|EEF44250.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 386

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 43/81 (53%), Positives = 59/81 (72%)
 Frame = +2

Query: 2   SVASVTEVLEIKQNVIKENEVAEFEASHHRVFLLGENRWEDSSRLVGRNKEVSASMVGIS 181
           +VAS+TE+ E +Q ++K+  V E + S  RVFLLGENRWE+ SRLV ++K+V  S    S
Sbjct: 268 AVASITEISETQQKIVKDG-VTEVKGSQQRVFLLGENRWEEPSRLVSKDKQVGVSKPKDS 326

Query: 182 TTKCIACRGEGRVLCTGTSGS 244
            TKC++CRGEGR+LCT   G+
Sbjct: 327 MTKCLSCRGEGRLLCTECDGT 347



 Score = 38.1 bits (87), Expect(3) = 3e-10
 Identities = 16/18 (88%), Positives = 18/18 (100%)
 Frame = +2

Query: 287 LEFSSFSSGTDRAVKTWQ 340
           +EFSSFSSGT+RAVKTWQ
Sbjct: 198 MEFSSFSSGTERAVKTWQ 215



 Score = 36.6 bits (83), Expect(3) = 3e-10
 Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 15/54 (27%)
 Frame = +1

Query: 343 ACEDGIMTAELLEKLFM---------------EQGAVDPNFHESTNGASVASVT 459
           A EDGIMTAELLE+L++               ++ ++  +  ES NGA+VAS+T
Sbjct: 220 APEDGIMTAELLERLYVGQQNKVTGSTISIDQKESSLTVSQKESANGAAVASIT 273



 Score = 33.9 bits (76), Expect(3) = 3e-10
 Identities = 17/42 (40%), Positives = 25/42 (59%)
 Frame = +3

Query: 180 QQQSVLLVVGRGAYYAQERQEAFQKLGFYSSEKDMAWSSLAS 305
           +++ + L  G      +E QEA   LGFYS E+DM +SS +S
Sbjct: 164 EKRRITLRKGSEGDEVREMQEALLNLGFYSGEEDMEFSSFSS 205


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