BLASTX nr result

ID: Coptis24_contig00014201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014201
         (1679 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305570.1| predicted protein [Populus trichocarpa] gi|2...   135   2e-29
ref|XP_002518475.1| hypothetical protein RCOM_0904330 [Ricinus c...   135   3e-29
emb|CBI26645.3| unnamed protein product [Vitis vinifera]              132   2e-28
ref|XP_003632958.1| PREDICTED: uncharacterized protein LOC100854...   131   5e-28
ref|NP_001240052.1| uncharacterized protein LOC100796494 [Glycin...   128   4e-27

>ref|XP_002305570.1| predicted protein [Populus trichocarpa] gi|222848534|gb|EEE86081.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score =  135 bits (341), Expect = 2e-29
 Identities = 79/155 (50%), Positives = 96/155 (61%), Gaps = 12/155 (7%)
 Frame = -2

Query: 970 DNNSKGRKPKDPSPVSNLRRIP-TASKMILRTKSSING-----AKMQQSAPVNIPDWSKI 809
           D++S  + P      S+   +P TA +MI  TK++        A+ Q SAPVNIPDWSKI
Sbjct: 42  DSSSNSKYPSSGPSFSSAWHLPSTAPRMIPATKTTATNHGGKAAQQQSSAPVNIPDWSKI 101

Query: 808 YRKNTHKSTQSSWTDDDTN------DDHGRYNXXXXXXXXXXXXEWVPPHEWIAKKLARS 647
           Y K++ +   +SW DD         DDH   N              VPPHEW+A+KLARS
Sbjct: 102 YGKDS-RDIMASWVDDHNGIAYGDGDDH--VNDDVDDCDEDGDDGIVPPHEWLARKLARS 158

Query: 646 QISSFSVCEGAGRTLKGRDLSKVRNAVLTRTGFLE 542
           QISSFSVCEG GRTLKGRDLSKVRNA+LT+TGFLE
Sbjct: 159 QISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE 193


>ref|XP_002518475.1| hypothetical protein RCOM_0904330 [Ricinus communis]
            gi|223542320|gb|EEF43862.1| hypothetical protein
            RCOM_0904330 [Ricinus communis]
          Length = 223

 Score =  135 bits (340), Expect = 3e-29
 Identities = 96/223 (43%), Positives = 113/223 (50%), Gaps = 44/223 (19%)
 Frame = -2

Query: 1078 MADRYSYYTNNST---SRGRSPIRNXXXXXXXXXXXVRKDNNSKGRKPKD----PSPVSN 920
            MAD +    NNS    SR      +            R+D++ K RK KD     SP S+
Sbjct: 1    MADWHGMMGNNSVGGYSRRSMRDEDFEEEDIWSVVKEREDSSPKIRKSKDNYCSSSPSSS 60

Query: 919  LRRIPTASKMILRTK-----------SSINGAK--MQQSAPVNIPDWSKIYRKNTHKSTQ 779
              R+ +A +MI R             +S + AK   Q SAPVNIPDWSKIY KNT   + 
Sbjct: 61   AWRLHSAPRMIPRANIVSPTSAGVPATSTHEAKAVQQSSAPVNIPDWSKIYGKNTRMGSW 120

Query: 778  SSWTDDDTNDD-------------HGRYNXXXXXXXXXXXXE-----------WVPPHEW 671
            ++  DDD +DD             HG  N                         VPPHEW
Sbjct: 121  ANNDDDDDDDDDDDDGIVYDDGEDHGHVNGNGYYYNYNNNNVDVNGNDDEEDEMVPPHEW 180

Query: 670  IAKKLARSQISSFSVCEGAGRTLKGRDLSKVRNAVLTRTGFLE 542
            IAKKLARSQISSFSVCEG GRTLKGRDLSKVRNA+L +TGFLE
Sbjct: 181  IAKKLARSQISSFSVCEGIGRTLKGRDLSKVRNAILAKTGFLE 223


>emb|CBI26645.3| unnamed protein product [Vitis vinifera]
          Length = 226

 Score =  132 bits (333), Expect = 2e-28
 Identities = 84/185 (45%), Positives = 105/185 (56%), Gaps = 4/185 (2%)
 Frame = -2

Query: 1084 SSMADRYSYYTNNSTSRGRSPIRNXXXXXXXXXXXVRKDNNSKGRKPKDPSPVSNLRRIP 905
            SSM +RY  Y   S +       +            R+D NS      + S  S  RR P
Sbjct: 59   SSMEERYGLYRQGSRALRSMRNGDFQEGDVWDVLNKREDYNSVVGSSMESSHFSP-RRPP 117

Query: 904  TASKMILRTKSSINGAK----MQQSAPVNIPDWSKIYRKNTHKSTQSSWTDDDTNDDHGR 737
            +A++MI R   + N       +QQSAPV IPDWSKIY +N+ K++ ++ +  D NDD G 
Sbjct: 118  SAARMIGRVHGNSNPIHEPRVVQQSAPVKIPDWSKIYGENSKKASSNNASWLDNNDDEGD 177

Query: 736  YNXXXXXXXXXXXXEWVPPHEWIAKKLARSQISSFSVCEGAGRTLKGRDLSKVRNAVLTR 557
                            +PPHEW+AKK ARSQISSFSV EG GRTLKGRDLS+VRNAVLT+
Sbjct: 178  ----------------LPPHEWLAKKYARSQISSFSVFEGVGRTLKGRDLSRVRNAVLTK 221

Query: 556  TGFLE 542
            TGFLE
Sbjct: 222  TGFLE 226


>ref|XP_003632958.1| PREDICTED: uncharacterized protein LOC100854465 [Vitis vinifera]
          Length = 190

 Score =  131 bits (330), Expect = 5e-28
 Identities = 91/193 (47%), Positives = 112/193 (58%), Gaps = 14/193 (7%)
 Frame = -2

Query: 1078 MADRYSYYTNNSTSRGRSPI-RNXXXXXXXXXXXVRKDNNSKGRKPKD------PSPVSN 920
            MA+R++   N+S   GRS    +            R+D++   RK KD       S  S+
Sbjct: 1    MANRHAAIGNSSGGGGRSMRDEDFDEEDVWAVVKDREDSSPIMRKSKDYSSGSSSSSSSS 60

Query: 919  LRRIPTASKMILRTKSS-INGAKMQQ--SAPVNIPDWSKIYRKNTHKSTQSSWTD--DDT 755
              R+PTA + I R  ++  + AK+ Q  SAP+NIPDWSKIYRKN   S    W D  +D 
Sbjct: 61   AWRLPTAPRGIRRGNNTPSHEAKLVQHSSAPMNIPDWSKIYRKN---SRAMPWVDGVEDV 117

Query: 754  NDDHGRYNXXXXXXXXXXXXE--WVPPHEWIAKKLARSQISSFSVCEGAGRTLKGRDLSK 581
            ND    +             +   VPPHEWIA+KLA SQISSFSVCEG GRTLKGRDLSK
Sbjct: 118  NDAGNTHQICVVDDDDDDDGDDDIVPPHEWIARKLASSQISSFSVCEGVGRTLKGRDLSK 177

Query: 580  VRNAVLTRTGFLE 542
            VRNAVLT+TGFLE
Sbjct: 178  VRNAVLTKTGFLE 190


>ref|NP_001240052.1| uncharacterized protein LOC100796494 [Glycine max]
           gi|255645861|gb|ACU23421.1| unknown [Glycine max]
          Length = 195

 Score =  128 bits (322), Expect = 4e-27
 Identities = 75/153 (49%), Positives = 98/153 (64%), Gaps = 11/153 (7%)
 Frame = -2

Query: 967 NNSKGRKPKDPSPVSNLRRIPTASKMILRTKSSINGAK---------MQQSAPVNIPDWS 815
           ++S  RK KD    S++   P++++MI R+ +S N +          +QQSAPVNIPDWS
Sbjct: 41  SSSGVRKFKDKGKSSSVPARPSSARMIPRSSNSSNNSSASSSNEAKVLQQSAPVNIPDWS 100

Query: 814 KIYRKNTHKSTQSSWTDDDTNDDHGRY--NXXXXXXXXXXXXEWVPPHEWIAKKLARSQI 641
           KIYR  T K++ S + DD   D    Y  +              +PPHE+IA++LARS+I
Sbjct: 101 KIYRTKTPKNSVSRFDDDYDGDGAANYGGDSDEDGEENDESDSKLPPHEFIARRLARSRI 160

Query: 640 SSFSVCEGAGRTLKGRDLSKVRNAVLTRTGFLE 542
           SSFSV EGAGRTLKGRDLSKVRN VL++TGFLE
Sbjct: 161 SSFSVLEGAGRTLKGRDLSKVRNDVLSKTGFLE 193


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