BLASTX nr result

ID: Coptis24_contig00014200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014200
         (1159 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274823.1| PREDICTED: uncharacterized protein LOC100254...   158   3e-36
ref|XP_002520953.1| conserved hypothetical protein [Ricinus comm...   135   3e-29
ref|XP_003553475.1| PREDICTED: uncharacterized protein LOC100790...   132   1e-28
ref|XP_002300815.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-27
ref|XP_002449863.1| hypothetical protein SORBIDRAFT_05g024570 [S...   128   3e-27

>ref|XP_002274823.1| PREDICTED: uncharacterized protein LOC100254442 [Vitis vinifera]
           gi|296084494|emb|CBI25053.3| unnamed protein product
           [Vitis vinifera]
          Length = 208

 Score =  158 bits (399), Expect = 3e-36
 Identities = 88/192 (45%), Positives = 115/192 (59%), Gaps = 7/192 (3%)
 Frame = +2

Query: 89  DYSASATLIPFNXXXXXXXXXXXXXXSDDPSIGPFVLAFKDSKTWKSALQTSHSKIRLQC 268
           DYS SAT+ PF+              SDDPS GPFVLAF+DS+ W+SA +   SKI  QC
Sbjct: 9   DYSPSATITPFDCPVPLLRGPVPASPSDDPSAGPFVLAFRDSRAWRSAFKACESKIIEQC 68

Query: 269 EGGARIGCSISASSKCKPPWWKTTLFGATTIDFSXXXXXXXXXMSACIASSKESCRKFAK 448
           E GARIGC++SASSKC PPWW   L G +    +         M+AC+A+SKE C KFAK
Sbjct: 69  EAGARIGCAVSASSKCGPPWW-WALIGRSPPSLAEREECEEREMAACVAASKEKCVKFAK 127

Query: 449 DKCLIPFREARIST----ISQKEVSKCISRAFPKSALLNTSS---QSNGQELFSICGLEI 607
           DKCL PFR+ARI+     +++K+  + +   F  S     +S   ++ G  + S C L  
Sbjct: 128 DKCLGPFRDARIAVNGRDLTRKKKREAVELIFWASMGGRRNSIGLENLGSWVLSKCKLGE 187

Query: 608 TNYRGSALLDSE 643
           TNYRGS LLD++
Sbjct: 188 TNYRGSDLLDTQ 199


>ref|XP_002520953.1| conserved hypothetical protein [Ricinus communis]
           gi|223539790|gb|EEF41370.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 202

 Score =  135 bits (339), Expect = 3e-29
 Identities = 77/189 (40%), Positives = 105/189 (55%), Gaps = 6/189 (3%)
 Frame = +2

Query: 86  EDYSASATLIPFNXXXXXXXXXXXXXXSDDPSIGPFVLAFKDSKTWKSALQTSHSKIRLQ 265
           ++YSASAT I F+              SDDPS GP+ LAF++ ++W +A + S SKI  Q
Sbjct: 10  DEYSASATTIEFDFQIPLLRGPIPAAESDDPSSGPYFLAFRNPQSWATAYKLSESKIISQ 69

Query: 266 CEGGARIGCSISASSKCKPPWWKTTLFGATTIDFSXXXXXXXXXMSACIASSKESCRKFA 445
           CEGGARIGC+ISAS KCKPPWW+  L G    D           M  C+ ++KE C  FA
Sbjct: 70  CEGGARIGCAISASQKCKPPWWR-NLIGWKVADLKEKENCEEREMEGCLVAAKEKCVGFA 128

Query: 446 KDKCLIPFREARISTISQKEVSKCISRAFPKSALLNTSSQSNGQELFSICGLE------I 607
           K+KC  PF EARI+ + ++EV K       +   L +  +  G + F + G++      I
Sbjct: 129 KEKCFRPFSEARIA-VGKEEVVK-------RLMCLVSVPEKTGIKWFRLMGIDDKCRFGI 180

Query: 608 TNYRGSALL 634
           TN + S LL
Sbjct: 181 TNQKASELL 189


>ref|XP_003553475.1| PREDICTED: uncharacterized protein LOC100790558 [Glycine max]
          Length = 156

 Score =  132 bits (333), Expect = 1e-28
 Identities = 67/138 (48%), Positives = 84/138 (60%)
 Frame = +2

Query: 71  EISNSEDYSASATLIPFNXXXXXXXXXXXXXXSDDPSIGPFVLAFKDSKTWKSALQTSHS 250
           E  N +DYS S+T+I F+              SDDPS GP+VLAF+DS+ W S+      
Sbjct: 5   EPDNVDDYSPSSTVIKFDRPVPLLRGPLPAGPSDDPSAGPYVLAFRDSRAWASSFAACER 64

Query: 251 KIRLQCEGGARIGCSISASSKCKPPWWKTTLFGATTIDFSXXXXXXXXXMSACIASSKES 430
           KI  QCE GARIGC++SAS KCK PWWK +L G T  D           M+ C A++KE 
Sbjct: 65  KIVEQCEEGARIGCAVSASRKCKLPWWK-SLAGPTLSDLKEREQCEVREMADCEAAAKEK 123

Query: 431 CRKFAKDKCLIPFREARI 484
           C  FA+DKCL+PFR+ARI
Sbjct: 124 CVGFARDKCLVPFRDARI 141


>ref|XP_002300815.1| predicted protein [Populus trichocarpa] gi|222842541|gb|EEE80088.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score =  129 bits (323), Expect = 2e-27
 Identities = 71/187 (37%), Positives = 99/187 (52%)
 Frame = +2

Query: 80  NSEDYSASATLIPFNXXXXXXXXXXXXXXSDDPSIGPFVLAFKDSKTWKSALQTSHSKIR 259
           N ++YSASAT I F+               DDPSI P VLAF+  ++W  A +T  SKI 
Sbjct: 8   NLDEYSASATTIKFDRPIPLLRGPIPAGPPDDPSISPHVLAFRSPQSWAVAYKTCESKII 67

Query: 260 LQCEGGARIGCSISASSKCKPPWWKTTLFGATTIDFSXXXXXXXXXMSACIASSKESCRK 439
            QCE GAR GC+I+AS+KCKPPWW+  + GA   D           +  C+ ++K+ C  
Sbjct: 68  SQCEEGARFGCAITASNKCKPPWWRGFIGGARLEDLKERERCEDRELEGCLVAAKDKCVG 127

Query: 440 FAKDKCLIPFREARISTISQKEVSKCISRAFPKSALLNTSSQSNGQELFSICGLEITNYR 619
           FAK+KC  PFR+ARI+   ++ V   +S      ++   SS+      F      +TN+R
Sbjct: 128 FAKEKCWKPFRDARIAVREEEVVRNLVSLV----SVPQRSSKWISLIGFGKFNFGVTNFR 183

Query: 620 GSALLDS 640
            S  L S
Sbjct: 184 ASEFLGS 190


>ref|XP_002449863.1| hypothetical protein SORBIDRAFT_05g024570 [Sorghum bicolor]
           gi|241935706|gb|EES08851.1| hypothetical protein
           SORBIDRAFT_05g024570 [Sorghum bicolor]
          Length = 202

 Score =  128 bits (321), Expect = 3e-27
 Identities = 79/197 (40%), Positives = 111/197 (56%), Gaps = 2/197 (1%)
 Frame = +2

Query: 80  NSEDYSASATLIPFNXXXXXXXXXXXXXXSDDPSIGPFVLAFKDSKTWKSALQTSHSKIR 259
           ++EDYSA ATL+ F+              S  PS    VLAF+D+ +W++A + + + + 
Sbjct: 10  SAEDYSAEATLVRFDPPLPLLRAPVR---SPAPSGEGPVLAFRDAASWRAAWEAAEANLV 66

Query: 260 LQCEGGARIGCSISASSKCKPPWWKTTLFGATTIDFSXXXXXXXXXMSACIASSKESCRK 439
            QCE GAR GCSISAS KCKPPWWK  LF A   D+          M+AC+ ++KE+C K
Sbjct: 67  SQCEAGARSGCSISASRKCKPPWWK-GLFVAAPTDYEERERCEEREMAACLEAAKEACIK 125

Query: 440 FAKDKCLIPFREARIST--ISQKEVSKCISRAFPKSALLNTSSQSNGQELFSICGLEITN 613
           FAK KC+ PFR+ARI++  + +         A  KS+  +  + +N Q      G   TN
Sbjct: 126 FAKAKCIGPFRDARIASEGLVENTDFHVWGAAADKSSSTSACALNNQQSFSPDPG--ATN 183

Query: 614 YRGSALLDSETGTEDYS 664
           YRGS +LDS +  E+ S
Sbjct: 184 YRGSDVLDSLSSKENNS 200


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