BLASTX nr result

ID: Coptis24_contig00014199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014199
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24654.1| unknown [Picea sitchensis]                             107   8e-22
ref|XP_002319510.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
gb|ABK94308.1| unknown [Populus trichocarpa]                          106   2e-21
gb|ABK92957.1| unknown [Populus trichocarpa]                          106   2e-21
ref|XP_002523090.1| 60S ribosomal protein L22, putative [Ricinus...   105   3e-21

>gb|ABK24654.1| unknown [Picea sitchensis]
          Length = 131

 Score =  107 bits (268), Expect = 8e-22
 Identities = 53/68 (77%), Positives = 62/68 (91%), Gaps = 4/68 (5%)
 Frame = +2

Query: 119 ATFVIDCGKPVEDKIMDIASLEKFLQERIKV----GALGDVVSIARHRNKISVTSDTNFS 286
           +TFVIDCGKPVEDKIMDIAS EKFLQ+RIKV    G LGD+V+I+RH+NKISVTS+++FS
Sbjct: 23  STFVIDCGKPVEDKIMDIASFEKFLQDRIKVGGKTGVLGDIVTISRHKNKISVTSESSFS 82

Query: 287 KRYLKYLT 310
           KRYLKYLT
Sbjct: 83  KRYLKYLT 90


>ref|XP_002319510.1| predicted protein [Populus trichocarpa] gi|222857886|gb|EEE95433.1|
           predicted protein [Populus trichocarpa]
          Length = 117

 Score =  106 bits (265), Expect = 2e-21
 Identities = 54/68 (79%), Positives = 59/68 (86%), Gaps = 4/68 (5%)
 Frame = +2

Query: 119 ATFVIDCGKPVEDKIMDIASLEKFLQERIKV----GALGDVVSIARHRNKISVTSDTNFS 286
           ATF IDC KPVEDKIMDIASLEKFLQERIKV    GALGD V++ R +NKI+VTSD+NFS
Sbjct: 9   ATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDAVTVTREKNKITVTSDSNFS 68

Query: 287 KRYLKYLT 310
           KRYLKYLT
Sbjct: 69  KRYLKYLT 76


>gb|ABK94308.1| unknown [Populus trichocarpa]
          Length = 124

 Score =  106 bits (265), Expect = 2e-21
 Identities = 54/68 (79%), Positives = 59/68 (86%), Gaps = 4/68 (5%)
 Frame = +2

Query: 119 ATFVIDCGKPVEDKIMDIASLEKFLQERIKV----GALGDVVSIARHRNKISVTSDTNFS 286
           ATF IDC KPVEDKIMDIASLEKFLQERIKV    GALGD V++ R +NKI+VTSD+NFS
Sbjct: 16  ATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDAVTVTREKNKITVTSDSNFS 75

Query: 287 KRYLKYLT 310
           KRYLKYLT
Sbjct: 76  KRYLKYLT 83


>gb|ABK92957.1| unknown [Populus trichocarpa]
          Length = 124

 Score =  106 bits (265), Expect = 2e-21
 Identities = 54/68 (79%), Positives = 59/68 (86%), Gaps = 4/68 (5%)
 Frame = +2

Query: 119 ATFVIDCGKPVEDKIMDIASLEKFLQERIKV----GALGDVVSIARHRNKISVTSDTNFS 286
           ATF IDC KPVEDKIMDIASLEKFLQERIKV    GALGD V++ R +NKI+VTSD+NFS
Sbjct: 16  ATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDTVTVTREKNKITVTSDSNFS 75

Query: 287 KRYLKYLT 310
           KRYLKYLT
Sbjct: 76  KRYLKYLT 83


>ref|XP_002523090.1| 60S ribosomal protein L22, putative [Ricinus communis]
           gi|223537652|gb|EEF39275.1| 60S ribosomal protein L22,
           putative [Ricinus communis]
          Length = 126

 Score =  105 bits (263), Expect = 3e-21
 Identities = 54/68 (79%), Positives = 59/68 (86%), Gaps = 4/68 (5%)
 Frame = +2

Query: 119 ATFVIDCGKPVEDKIMDIASLEKFLQERIKV----GALGDVVSIARHRNKISVTSDTNFS 286
           ATF IDC KPVEDKIMDIASLEKFLQERIKV    GALGD VS++R + KI+VTSD+NFS
Sbjct: 18  ATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDTVSVSREKTKITVTSDSNFS 77

Query: 287 KRYLKYLT 310
           KRYLKYLT
Sbjct: 78  KRYLKYLT 85


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