BLASTX nr result

ID: Coptis24_contig00014194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014194
         (1274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE66613.1| hypothetical protein OsJ_23193 [Oryza sativa Japo...   155   2e-43
emb|CBI39086.3| unnamed protein product [Vitis vinifera]              168   2e-39
ref|XP_002267555.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   168   2e-39
ref|XP_002514434.1| Ubiquitin carboxyl-terminal hydrolase, putat...   167   4e-39
ref|XP_002316470.1| predicted protein [Populus trichocarpa] gi|2...   166   1e-38

>gb|EEE66613.1| hypothetical protein OsJ_23193 [Oryza sativa Japonica Group]
          Length = 1017

 Score =  155 bits (391), Expect(2) = 2e-43
 Identities = 70/99 (70%), Positives = 86/99 (86%)
 Frame = -3

Query: 1269 FKEEVAEKFGIPVQFQRLWLWVKRKTHTYRPYRPLTPREEIQSVGQLRQVSNKAQNAEVK 1090
            FKEEVA++FGIP QFQR WLW KR+ HTYRP RPLTP+EE  +VGQL++ +NKA NAE+K
Sbjct: 533  FKEEVAKEFGIPTQFQRFWLWAKRQNHTYRPNRPLTPQEETHTVGQLKEAANKAHNAELK 592

Query: 1089 LFLEVELGPDLRPIKFPEKTKKDILLFFKLYDPIEEELR 973
            LFLEVELG DL+P+  P+KT++DILLFFKLYDP +E+LR
Sbjct: 593  LFLEVELGLDLKPLPLPDKTREDILLFFKLYDPEKEQLR 631



 Score = 48.9 bits (115), Expect(2) = 2e-43
 Identities = 24/42 (57%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
 Frame = -2

Query: 973 LEDGDILCFQKFPTIRSGLECRYPVVPSFLEFVHNRR-VHLR 851
           LEDGDI+CFQK P   +  + RYP VPSFL ++ NR+ VH R
Sbjct: 668 LEDGDIVCFQKSPKPDTADQYRYPDVPSFLVYIRNRQVVHFR 709


>emb|CBI39086.3| unnamed protein product [Vitis vinifera]
          Length = 1116

 Score =  168 bits (426), Expect = 2e-39
 Identities = 81/118 (68%), Positives = 98/118 (83%)
 Frame = -3

Query: 1272 VFKEEVAEKFGIPVQFQRLWLWVKRKTHTYRPYRPLTPREEIQSVGQLRQVSNKAQNAEV 1093
            +FKEEVA++FGIPVQ+QR W+W KR+ HTYRP RPLTP+EE QSVGQLR+VS K  NAE+
Sbjct: 607  LFKEEVAKEFGIPVQYQRFWIWAKRQNHTYRPNRPLTPQEEAQSVGQLREVSTKVNNAEL 666

Query: 1092 KLFLEVELGPDLRPIKFPEKTKKDILLFFKLYDPIEEELR*KMGTFYVSRNSLQLEVV 919
            KLFLEVELGPDLRPI  PEKTK+DILLFFKLYDP +EELR  +G  +V  +   +E++
Sbjct: 667  KLFLEVELGPDLRPIPPPEKTKEDILLFFKLYDPEKEELR-YVGRLFVKSSGKPIEIL 723


>ref|XP_002267555.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Vitis
            vinifera]
          Length = 1117

 Score =  168 bits (426), Expect = 2e-39
 Identities = 81/118 (68%), Positives = 98/118 (83%)
 Frame = -3

Query: 1272 VFKEEVAEKFGIPVQFQRLWLWVKRKTHTYRPYRPLTPREEIQSVGQLRQVSNKAQNAEV 1093
            +FKEEVA++FGIPVQ+QR W+W KR+ HTYRP RPLTP+EE QSVGQLR+VS K  NAE+
Sbjct: 607  LFKEEVAKEFGIPVQYQRFWIWAKRQNHTYRPNRPLTPQEEAQSVGQLREVSTKVNNAEL 666

Query: 1092 KLFLEVELGPDLRPIKFPEKTKKDILLFFKLYDPIEEELR*KMGTFYVSRNSLQLEVV 919
            KLFLEVELGPDLRPI  PEKTK+DILLFFKLYDP +EELR  +G  +V  +   +E++
Sbjct: 667  KLFLEVELGPDLRPIPPPEKTKEDILLFFKLYDPEKEELR-YVGRLFVKSSGKPIEIL 723


>ref|XP_002514434.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
            gi|223546430|gb|EEF47930.1| Ubiquitin carboxyl-terminal
            hydrolase, putative [Ricinus communis]
          Length = 1109

 Score =  167 bits (424), Expect = 4e-39
 Identities = 83/118 (70%), Positives = 96/118 (81%)
 Frame = -3

Query: 1272 VFKEEVAEKFGIPVQFQRLWLWVKRKTHTYRPYRPLTPREEIQSVGQLRQVSNKAQNAEV 1093
            +FKEEV ++FGIPVQFQR WLW KR+ HTYRP RPLTP+EE QSVGQLR+VSNKA NAE+
Sbjct: 606  LFKEEVVKEFGIPVQFQRFWLWAKRQNHTYRPNRPLTPQEEAQSVGQLREVSNKANNAEL 665

Query: 1092 KLFLEVELGPDLRPIKFPEKTKKDILLFFKLYDPIEEELR*KMGTFYVSRNSLQLEVV 919
            KLFLEVE G DLRPI  PEKTK+DILLFFKLYDP +EELR  +G  +V      LE++
Sbjct: 666  KLFLEVEFGQDLRPIPPPEKTKEDILLFFKLYDPSKEELR-YVGRLFVKGAGKPLEIL 722



 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 26/38 (68%), Positives = 30/38 (78%)
 Frame = -2

Query: 973 LEDGDILCFQKFPTIRSGLECRYPVVPSFLEFVHNRRV 860
           LEDGDI+CFQK      G +CRYP VPSFLE+VHNR+V
Sbjct: 765 LEDGDIVCFQKSAQDGGGEQCRYPDVPSFLEYVHNRQV 802


>ref|XP_002316470.1| predicted protein [Populus trichocarpa] gi|222865510|gb|EEF02641.1|
            predicted protein [Populus trichocarpa]
          Length = 1116

 Score =  166 bits (420), Expect = 1e-38
 Identities = 81/118 (68%), Positives = 98/118 (83%)
 Frame = -3

Query: 1272 VFKEEVAEKFGIPVQFQRLWLWVKRKTHTYRPYRPLTPREEIQSVGQLRQVSNKAQNAEV 1093
            +FKEEVA++FGIPVQFQR WLW KR+ HTYRP RPLTP+EE QSVGQLR+VSNKA NAE+
Sbjct: 606  LFKEEVAKEFGIPVQFQRFWLWAKRQNHTYRPNRPLTPQEESQSVGQLREVSNKANNAEL 665

Query: 1092 KLFLEVELGPDLRPIKFPEKTKKDILLFFKLYDPIEEELR*KMGTFYVSRNSLQLEVV 919
            KLFLEVE+G D RP+  PEKTK+DILLFFKLYDP +E+LR  +G  +V  +   LE++
Sbjct: 666  KLFLEVEVGQDSRPVPPPEKTKEDILLFFKLYDPSKEKLR-YVGRLFVKGSGKPLEIL 722



 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 26/38 (68%), Positives = 32/38 (84%)
 Frame = -2

Query: 973 LEDGDILCFQKFPTIRSGLECRYPVVPSFLEFVHNRRV 860
           LEDGDI+CFQK P + S  +CRYP VPSFLE++HNR+V
Sbjct: 765 LEDGDIVCFQKPPQMGSNEQCRYPDVPSFLEYMHNRQV 802


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