BLASTX nr result
ID: Coptis24_contig00014172
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00014172 (637 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI17077.3| unnamed protein product [Vitis vinifera] 58 1e-06 ref|XP_003632269.1| PREDICTED: uncharacterized protein LOC100852... 58 1e-06 ref|XP_002312896.1| predicted protein [Populus trichocarpa] gi|1... 57 4e-06 >emb|CBI17077.3| unnamed protein product [Vitis vinifera] Length = 101 Score = 58.2 bits (139), Expect = 1e-06 Identities = 27/39 (69%), Positives = 33/39 (84%) Frame = -3 Query: 440 LSSLLPLHSAVASARLISNLSTDTNTSIEGRFVNYISPI 324 LSSLLP+HSA+ASA L+SNL + TSI+GRF NY+SPI Sbjct: 63 LSSLLPVHSAIASACLVSNLPAEPTTSIQGRFANYLSPI 101 >ref|XP_003632269.1| PREDICTED: uncharacterized protein LOC100852551 [Vitis vinifera] Length = 95 Score = 58.2 bits (139), Expect = 1e-06 Identities = 27/39 (69%), Positives = 33/39 (84%) Frame = -3 Query: 440 LSSLLPLHSAVASARLISNLSTDTNTSIEGRFVNYISPI 324 LSSLLP+HSA+ASA L+SNL + TSI+GRF NY+SPI Sbjct: 57 LSSLLPVHSAIASACLVSNLPAEPTTSIQGRFANYLSPI 95 >ref|XP_002312896.1| predicted protein [Populus trichocarpa] gi|118487224|gb|ABK95440.1| unknown [Populus trichocarpa] gi|222849304|gb|EEE86851.1| predicted protein [Populus trichocarpa] Length = 102 Score = 56.6 bits (135), Expect = 4e-06 Identities = 27/39 (69%), Positives = 33/39 (84%) Frame = -3 Query: 440 LSSLLPLHSAVASARLISNLSTDTNTSIEGRFVNYISPI 324 LSSLLP+HSA+ASA L+S L ++ +TS EGRF NYISPI Sbjct: 64 LSSLLPVHSAIASACLVSKLPSEVSTSSEGRFANYISPI 102