BLASTX nr result

ID: Coptis24_contig00014172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014172
         (637 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17077.3| unnamed protein product [Vitis vinifera]               58   1e-06
ref|XP_003632269.1| PREDICTED: uncharacterized protein LOC100852...    58   1e-06
ref|XP_002312896.1| predicted protein [Populus trichocarpa] gi|1...    57   4e-06

>emb|CBI17077.3| unnamed protein product [Vitis vinifera]
          Length = 101

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/39 (69%), Positives = 33/39 (84%)
 Frame = -3

Query: 440 LSSLLPLHSAVASARLISNLSTDTNTSIEGRFVNYISPI 324
           LSSLLP+HSA+ASA L+SNL  +  TSI+GRF NY+SPI
Sbjct: 63  LSSLLPVHSAIASACLVSNLPAEPTTSIQGRFANYLSPI 101


>ref|XP_003632269.1| PREDICTED: uncharacterized protein LOC100852551 [Vitis vinifera]
          Length = 95

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/39 (69%), Positives = 33/39 (84%)
 Frame = -3

Query: 440 LSSLLPLHSAVASARLISNLSTDTNTSIEGRFVNYISPI 324
           LSSLLP+HSA+ASA L+SNL  +  TSI+GRF NY+SPI
Sbjct: 57  LSSLLPVHSAIASACLVSNLPAEPTTSIQGRFANYLSPI 95


>ref|XP_002312896.1| predicted protein [Populus trichocarpa] gi|118487224|gb|ABK95440.1|
           unknown [Populus trichocarpa]
           gi|222849304|gb|EEE86851.1| predicted protein [Populus
           trichocarpa]
          Length = 102

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 27/39 (69%), Positives = 33/39 (84%)
 Frame = -3

Query: 440 LSSLLPLHSAVASARLISNLSTDTNTSIEGRFVNYISPI 324
           LSSLLP+HSA+ASA L+S L ++ +TS EGRF NYISPI
Sbjct: 64  LSSLLPVHSAIASACLVSKLPSEVSTSSEGRFANYISPI 102


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