BLASTX nr result
ID: Coptis24_contig00014170
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00014170 (243 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273082.1| PREDICTED: sorting and assembly machinery co... 100 9e-20 emb|CBI25445.3| unnamed protein product [Vitis vinifera] 100 9e-20 emb|CAN84130.1| hypothetical protein VITISV_041873 [Vitis vinifera] 100 9e-20 gb|AFW82290.1| hypothetical protein ZEAMMB73_445836 [Zea mays] 94 9e-18 ref|XP_003566158.1| PREDICTED: sorting and assembly machinery co... 94 9e-18 >ref|XP_002273082.1| PREDICTED: sorting and assembly machinery component 50 homolog B-like [Vitis vinifera] Length = 534 Score = 100 bits (250), Expect = 9e-20 Identities = 49/80 (61%), Positives = 62/80 (77%), Gaps = 1/80 (1%) Frame = +2 Query: 2 NSSPVCXXXXXXXXXXFKSRGVGPTEQRRAMIDIS-GNSAKCTGRDVLGGDLACSAFADL 178 NSSPVC FKSRG+GPTE+RR + D S G +++ +GRDV+GGDLA +AFADL Sbjct: 386 NSSPVCTLGGPTTLLGFKSRGLGPTERRRLIRDKSNGENSETSGRDVIGGDLAVTAFADL 445 Query: 179 SFNLPLKVLRDAGVHGHIFA 238 SF+LPLK+ RDAG+HGH+FA Sbjct: 446 SFDLPLKLFRDAGIHGHVFA 465 >emb|CBI25445.3| unnamed protein product [Vitis vinifera] Length = 464 Score = 100 bits (250), Expect = 9e-20 Identities = 49/80 (61%), Positives = 62/80 (77%), Gaps = 1/80 (1%) Frame = +2 Query: 2 NSSPVCXXXXXXXXXXFKSRGVGPTEQRRAMIDIS-GNSAKCTGRDVLGGDLACSAFADL 178 NSSPVC FKSRG+GPTE+RR + D S G +++ +GRDV+GGDLA +AFADL Sbjct: 316 NSSPVCTLGGPTTLLGFKSRGLGPTERRRLIRDKSNGENSETSGRDVIGGDLAVTAFADL 375 Query: 179 SFNLPLKVLRDAGVHGHIFA 238 SF+LPLK+ RDAG+HGH+FA Sbjct: 376 SFDLPLKLFRDAGIHGHVFA 395 >emb|CAN84130.1| hypothetical protein VITISV_041873 [Vitis vinifera] Length = 564 Score = 100 bits (250), Expect = 9e-20 Identities = 49/80 (61%), Positives = 62/80 (77%), Gaps = 1/80 (1%) Frame = +2 Query: 2 NSSPVCXXXXXXXXXXFKSRGVGPTEQRRAMIDIS-GNSAKCTGRDVLGGDLACSAFADL 178 NSSPVC FKSRG+GPTE+RR + D S G +++ +GRDV+GGDLA +AFADL Sbjct: 429 NSSPVCTLGGPTTLLGFKSRGLGPTERRRLIRDKSNGENSETSGRDVIGGDLAVTAFADL 488 Query: 179 SFNLPLKVLRDAGVHGHIFA 238 SF+LPLK+ RDAG+HGH+FA Sbjct: 489 SFDLPLKLFRDAGIHGHVFA 508 >gb|AFW82290.1| hypothetical protein ZEAMMB73_445836 [Zea mays] Length = 527 Score = 94.4 bits (233), Expect = 9e-18 Identities = 46/78 (58%), Positives = 55/78 (70%) Frame = +2 Query: 2 NSSPVCXXXXXXXXXXFKSRGVGPTEQRRAMIDISGNSAKCTGRDVLGGDLACSAFADLS 181 NSSPVC F+ RGVGPTE RR +++ S + + GRD LGGDLA SAFADLS Sbjct: 379 NSSPVCSLGGPSSLLGFRLRGVGPTEARRHVLNNSESGSADPGRDYLGGDLAVSAFADLS 438 Query: 182 FNLPLKVLRDAGVHGHIF 235 F+LPLK+ RDAG+HGH F Sbjct: 439 FDLPLKIFRDAGIHGHAF 456 >ref|XP_003566158.1| PREDICTED: sorting and assembly machinery component 50 homolog A-like [Brachypodium distachyon] Length = 526 Score = 94.4 bits (233), Expect = 9e-18 Identities = 46/78 (58%), Positives = 54/78 (69%) Frame = +2 Query: 2 NSSPVCXXXXXXXXXXFKSRGVGPTEQRRAMIDISGNSAKCTGRDVLGGDLACSAFADLS 181 +SSPVC F++RGVGPTE RR + S N + GRD LGGDLA SAFADLS Sbjct: 378 HSSPVCSLGGISSLLGFRTRGVGPTEPRRLVPSASENDSALPGRDYLGGDLAVSAFADLS 437 Query: 182 FNLPLKVLRDAGVHGHIF 235 F+LPLK+ RDAG+HGH F Sbjct: 438 FDLPLKLFRDAGIHGHAF 455