BLASTX nr result

ID: Coptis24_contig00014153 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014153
         (1040 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278026.1| PREDICTED: uncharacterized protein LOC100265...   331   2e-88
ref|XP_002521269.1| conserved hypothetical protein [Ricinus comm...   328   1e-87
ref|XP_002312946.1| predicted protein [Populus trichocarpa] gi|2...   328   2e-87
emb|CBI37844.3| unnamed protein product [Vitis vinifera]              317   2e-84
ref|XP_003555859.1| PREDICTED: uncharacterized protein LOC100794...   306   4e-81

>ref|XP_002278026.1| PREDICTED: uncharacterized protein LOC100265837 [Vitis vinifera]
          Length = 291

 Score =  331 bits (848), Expect = 2e-88
 Identities = 173/245 (70%), Positives = 199/245 (81%), Gaps = 3/245 (1%)
 Frame = -3

Query: 831 GAVVPSRLRVV-VLAGSRADDS--YEMSVENALKVLGVSDGASFDEILRAKNSIIATCRD 661
           G   PSR  +    AGSRADDS  +EMSVE+ALK+LGVS+GASFD+ILRAKNSI+  C+D
Sbjct: 47  GVSSPSRRALFRTRAGSRADDSAPFEMSVESALKLLGVSEGASFDDILRAKNSIVKACKD 106

Query: 660 DQDAIAQVEAAYDMLLMQSLTQRRAGKVVSSNIRYADVKPVSSPGMSSMPRWLQASVKNP 481
           +Q+AIAQVEAAYDMLLMQSLTQRRAGKVV+S IRYADVKPV++ G+ SMP+WLQ +VK+ 
Sbjct: 107 NQEAIAQVEAAYDMLLMQSLTQRRAGKVVNSGIRYADVKPVNASGLGSMPQWLQTTVKSS 166

Query: 480 PISIEAPPASNLGVQAGIYGALMVLTYANGVSTSSSAPYAGADVPGLILATSFGASLYFL 301
           P+S+E P A NLG+QAG+YGALM LTY NG STSS  PYAGADVPGLILATSFGASLYF+
Sbjct: 167 PVSVETPSAGNLGIQAGVYGALMGLTYINGASTSSVGPYAGADVPGLILATSFGASLYFM 226

Query: 300 TKKNIKLGKXXXXXXXXXXXXXXXXXXVENWLQVDIVPFFGIHSPAVVVSEFIIFSQLLV 121
           TKKN+KLGK                  VE+WLQVDIVPF GIH+PAVVVSEFI+FSQ LV
Sbjct: 227 TKKNVKLGKATVITLGGLVAGAVVGSAVESWLQVDIVPFLGIHAPAVVVSEFILFSQFLV 286

Query: 120 SLYLR 106
           SLYLR
Sbjct: 287 SLYLR 291


>ref|XP_002521269.1| conserved hypothetical protein [Ricinus communis]
           gi|223539537|gb|EEF41125.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 293

 Score =  328 bits (841), Expect = 1e-87
 Identities = 165/231 (71%), Positives = 193/231 (83%), Gaps = 2/231 (0%)
 Frame = -3

Query: 792 AGSRADDS--YEMSVENALKVLGVSDGASFDEILRAKNSIIATCRDDQDAIAQVEAAYDM 619
           A SRADDS  +EMSVENALK+LGVS+GASFD+ILRAK SI+A+C+DDQ+A+AQVEAAYDM
Sbjct: 63  ASSRADDSAPFEMSVENALKLLGVSEGASFDDILRAKKSILASCKDDQEAVAQVEAAYDM 122

Query: 618 LLMQSLTQRRAGKVVSSNIRYADVKPVSSPGMSSMPRWLQASVKNPPISIEAPPASNLGV 439
           LLMQSLTQRRAGKV +S+IRYADVKP++ PGM S+P+WLQA++K  P+S+E P   +LG+
Sbjct: 123 LLMQSLTQRRAGKVANSDIRYADVKPINGPGMGSVPQWLQATMKKTPVSVETPSTGDLGI 182

Query: 438 QAGIYGALMVLTYANGVSTSSSAPYAGADVPGLILATSFGASLYFLTKKNIKLGKXXXXX 259
           +AG+YGA+MVLTY NG S+ S APYAGADVPGLILAT+FGASLYFLTKKN+KLGK     
Sbjct: 183 RAGVYGAMMVLTYVNGASSISVAPYAGADVPGLILATTFGASLYFLTKKNVKLGKATLIT 242

Query: 258 XXXXXXXXXXXXXVENWLQVDIVPFFGIHSPAVVVSEFIIFSQLLVSLYLR 106
                        VENWLQVDIVPF GIHSPA VVSEFI+FSQ LVSLYLR
Sbjct: 243 LGGLAAGAVVGSAVENWLQVDIVPFLGIHSPAAVVSEFILFSQFLVSLYLR 293


>ref|XP_002312946.1| predicted protein [Populus trichocarpa] gi|222849354|gb|EEE86901.1|
           predicted protein [Populus trichocarpa]
          Length = 289

 Score =  328 bits (840), Expect = 2e-87
 Identities = 178/284 (62%), Positives = 204/284 (71%), Gaps = 3/284 (1%)
 Frame = -3

Query: 948 NNLLPTQSKFWTRPISRPSATXXXXXXXXXXXXNSKQLSGAVVPSRLRVVVLAGSRADDS 769
           N L P+ S F   P+  PS                +   G +V  R R +V AGSRADDS
Sbjct: 10  NRLSPSGSPFSRPPVHNPSNLNQIKSSLKKDPYFWR---GVIVQHR-RNLVRAGSRADDS 65

Query: 768 ---YEMSVENALKVLGVSDGASFDEILRAKNSIIATCRDDQDAIAQVEAAYDMLLMQSLT 598
              +EMSVE+ALK+LGV DGASFDEILRAK  I+ATC+DDQ+AIAQVE AYDMLLM+SLT
Sbjct: 66  SAPFEMSVESALKLLGVPDGASFDEILRAKKLIVATCKDDQEAIAQVETAYDMLLMRSLT 125

Query: 597 QRRAGKVVSSNIRYADVKPVSSPGMSSMPRWLQASVKNPPISIEAPPASNLGVQAGIYGA 418
           QRRAGKV SSNIRYADVKPV+ PGM SMP+WLQ ++K  P+S+E P    L +QAG+YGA
Sbjct: 126 QRRAGKVASSNIRYADVKPVNGPGMGSMPQWLQTTIKKTPVSVETPSTGELSLQAGVYGA 185

Query: 417 LMVLTYANGVSTSSSAPYAGADVPGLILATSFGASLYFLTKKNIKLGKXXXXXXXXXXXX 238
           LMVLTY NG ST S APYAGADVPGL+LATSFGASLYF+TKKN+KLGK            
Sbjct: 186 LMVLTYVNGTSTPSVAPYAGADVPGLLLATSFGASLYFMTKKNVKLGKATVITIGGLAAG 245

Query: 237 XXXXXXVENWLQVDIVPFFGIHSPAVVVSEFIIFSQLLVSLYLR 106
                 VEN LQVD+VP  G+HSPA VVSEFI+FSQ LVSLYLR
Sbjct: 246 AVVGSAVENLLQVDVVPLLGLHSPAAVVSEFILFSQFLVSLYLR 289


>emb|CBI37844.3| unnamed protein product [Vitis vinifera]
          Length = 219

 Score =  317 bits (813), Expect = 2e-84
 Identities = 160/219 (73%), Positives = 184/219 (84%)
 Frame = -3

Query: 762 MSVENALKVLGVSDGASFDEILRAKNSIIATCRDDQDAIAQVEAAYDMLLMQSLTQRRAG 583
           MSVE+ALK+LGVS+GASFD+ILRAKNSI+  C+D+Q+AIAQVEAAYDMLLMQSLTQRRAG
Sbjct: 1   MSVESALKLLGVSEGASFDDILRAKNSIVKACKDNQEAIAQVEAAYDMLLMQSLTQRRAG 60

Query: 582 KVVSSNIRYADVKPVSSPGMSSMPRWLQASVKNPPISIEAPPASNLGVQAGIYGALMVLT 403
           KVV+S IRYADVKPV++ G+ SMP+WLQ +VK+ P+S+E P A NLG+QAG+YGALM LT
Sbjct: 61  KVVNSGIRYADVKPVNASGLGSMPQWLQTTVKSSPVSVETPSAGNLGIQAGVYGALMGLT 120

Query: 402 YANGVSTSSSAPYAGADVPGLILATSFGASLYFLTKKNIKLGKXXXXXXXXXXXXXXXXX 223
           Y NG STSS  PYAGADVPGLILATSFGASLYF+TKKN+KLGK                 
Sbjct: 121 YINGASTSSVGPYAGADVPGLILATSFGASLYFMTKKNVKLGKATVITLGGLVAGAVVGS 180

Query: 222 XVENWLQVDIVPFFGIHSPAVVVSEFIIFSQLLVSLYLR 106
            VE+WLQVDIVPF GIH+PAVVVSEFI+FSQ LVSLYLR
Sbjct: 181 AVESWLQVDIVPFLGIHAPAVVVSEFILFSQFLVSLYLR 219


>ref|XP_003555859.1| PREDICTED: uncharacterized protein LOC100794285 [Glycine max]
          Length = 280

 Score =  306 bits (785), Expect = 4e-81
 Identities = 168/240 (70%), Positives = 190/240 (79%), Gaps = 4/240 (1%)
 Frame = -3

Query: 813 RLRVV--VLAGSRADDS--YEMSVENALKVLGVSDGASFDEILRAKNSIIATCRDDQDAI 646
           R+R V  V A SRADDS  +EMSVENALK+LGVS+GASFD+ILRAKN+I+A C+DDQDAI
Sbjct: 46  RIRTVAPVQASSRADDSAPFEMSVENALKLLGVSEGASFDDILRAKNAIVANCKDDQDAI 105

Query: 645 AQVEAAYDMLLMQSLTQRRAGKVVSSNIRYADVKPVSSPGMSSMPRWLQASVKNPPISIE 466
           AQVEAAYDMLLMQSLTQRRAGKVV+S++RYADVK V SP   SMP+WL    KN P+SIE
Sbjct: 106 AQVEAAYDMLLMQSLTQRRAGKVVNSSVRYADVKRVKSPAGGSMPQWL----KNSPVSIE 161

Query: 465 APPASNLGVQAGIYGALMVLTYANGVSTSSSAPYAGADVPGLILATSFGASLYFLTKKNI 286
           +P  S+LG+QAG+YGALM LTY NG S + +A YAGADVPGL+LA SFGASLYF+TKKN+
Sbjct: 162 SPSTSDLGLQAGVYGALMGLTYLNGAS-APAAGYAGADVPGLLLAGSFGASLYFMTKKNV 220

Query: 285 KLGKXXXXXXXXXXXXXXXXXXVENWLQVDIVPFFGIHSPAVVVSEFIIFSQLLVSLYLR 106
           KLGK                  VENWLQVDIVPF GIHSPA VVSE II SQ LVSLYLR
Sbjct: 221 KLGKATVITIGGLVAGAVVGSAVENWLQVDIVPFLGIHSPAAVVSEIIIISQFLVSLYLR 280


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