BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014136
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263648.1| PREDICTED: DNA-directed RNA polymerase III s...    94   1e-17
emb|CAN72759.1| hypothetical protein VITISV_004802 [Vitis vinifera]    94   1e-17
gb|AFK37258.1| unknown [Lotus japonicus]                               84   9e-15
gb|AFK40316.1| unknown [Lotus japonicus]                               80   2e-13
ref|XP_002306270.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13

>ref|XP_002263648.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC9 [Vitis
           vinifera] gi|296087853|emb|CBI35109.3| unnamed protein
           product [Vitis vinifera]
          Length = 156

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 48/77 (62%), Positives = 59/77 (76%)
 Frame = -1

Query: 232 NQTRESIDEFLTSCEKFDLAKAEKLNIINIRPASQVEIDPIIEDCEKRIHNDEVEDLVNM 53
           NQTRESI+E L  C+K+DLAKAE LNIINIRPAS VEIDPIIE+ EKR+  + +EDL+ M
Sbjct: 54  NQTRESINELLEKCKKYDLAKAEILNIINIRPASPVEIDPIIEESEKRM-GEGIEDLIEM 112

Query: 52  IVEVLPSSGKTGGTDEE 2
           ++ VLP       T+EE
Sbjct: 113 VITVLPPPPNQMNTEEE 129


>emb|CAN72759.1| hypothetical protein VITISV_004802 [Vitis vinifera]
          Length = 388

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 48/77 (62%), Positives = 59/77 (76%)
 Frame = -1

Query: 232 NQTRESIDEFLTSCEKFDLAKAEKLNIINIRPASQVEIDPIIEDCEKRIHNDEVEDLVNM 53
           NQTRESI+E L  C+K+DLAKAE LNIINIRPAS VEIDPIIE+ EKR+  + +EDL+ M
Sbjct: 75  NQTRESINELLEKCKKYDLAKAEILNIINIRPASPVEIDPIIEESEKRM-GEGIEDLIEM 133

Query: 52  IVEVLPSSGKTGGTDEE 2
           ++ VLP       T+EE
Sbjct: 134 VITVLPPPPNQMNTEEE 150


>gb|AFK37258.1| unknown [Lotus japonicus]
          Length = 162

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 40/67 (59%), Positives = 54/67 (80%)
 Frame = -1

Query: 232 NQTRESIDEFLTSCEKFDLAKAEKLNIINIRPASQVEIDPIIEDCEKRIHNDEVEDLVNM 53
           NQTRESI+EF+ S +K DLAKAE LNIINIRPA+ VE+ PIIE+CE R  ++EV ++V +
Sbjct: 54  NQTRESINEFMASVKKHDLAKAEVLNIINIRPAAAVEMFPIIEECESRFPDEEVTEIVEL 113

Query: 52  IVEVLPS 32
           + + LP+
Sbjct: 114 VKKTLPA 120


>gb|AFK40316.1| unknown [Lotus japonicus]
          Length = 162

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 39/67 (58%), Positives = 52/67 (77%)
 Frame = -1

Query: 232 NQTRESIDEFLTSCEKFDLAKAEKLNIINIRPASQVEIDPIIEDCEKRIHNDEVEDLVNM 53
           NQTRESI+EF+ S +K DLAKAE LNIINI PA+ VE+ PIIE+CE R  ++EV ++V +
Sbjct: 54  NQTRESINEFMASVKKHDLAKAEVLNIINITPAAAVEMFPIIEECEPRFPDEEVTEIVEL 113

Query: 52  IVEVLPS 32
             + LP+
Sbjct: 114 AKKTLPA 120


>ref|XP_002306270.1| predicted protein [Populus trichocarpa] gi|222855719|gb|EEE93266.1|
           predicted protein [Populus trichocarpa]
          Length = 159

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 43/80 (53%), Positives = 53/80 (66%), Gaps = 4/80 (5%)
 Frame = -1

Query: 232 NQTRESIDEFLTSCEKFDLAKAEKLNIINIRPASQVEIDPIIEDCEKRIHNDEVEDLVNM 53
           N TRE I+EFL  C+K+DLAKAE LNIINIRP+  VEI  IIE+ + R     +E+LV +
Sbjct: 54  NLTREKINEFLERCKKYDLAKAELLNIINIRPSQTVEIYTIIEEMDSRFEMPIIEELVEL 113

Query: 52  IVEVLP----SSGKTGGTDE 5
           + EVLP         GGTDE
Sbjct: 114 VEEVLPPPPGQPKAEGGTDE 133