BLASTX nr result

ID: Coptis24_contig00014123 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014123
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274369.1| PREDICTED: tyrosyl-tRNA synthetase [Vitis vi...   101   1e-42
emb|CAN65657.1| hypothetical protein VITISV_000951 [Vitis vinifera]   101   1e-42
ref|XP_002315391.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-42
ref|XP_002310952.1| predicted protein [Populus trichocarpa] gi|2...    99   2e-42
emb|CAA71881.1| Tyrosyl-tRNA synthetase [Nicotiana tabacum]           102   6e-42

>ref|XP_002274369.1| PREDICTED: tyrosyl-tRNA synthetase [Vitis vinifera]
           gi|297742518|emb|CBI34667.3| unnamed protein product
           [Vitis vinifera]
          Length = 385

 Score =  101 bits (252), Expect(2) = 1e-42
 Identities = 45/55 (81%), Positives = 52/55 (94%)
 Frame = -3

Query: 410 LTLEERFKIVRSIGEECIQEDELMNLLEKKPQPIAYDGFEPSGRMHIAQGILKTI 246
           +TLEE+F+IVRS+GEECIQEDELMNLL  KP+PI YDGFEPSGRMHIAQG++KTI
Sbjct: 35  MTLEEKFRIVRSVGEECIQEDELMNLLRNKPEPICYDGFEPSGRMHIAQGVMKTI 89



 Score = 97.1 bits (240), Expect(2) = 1e-42
 Identities = 43/49 (87%), Positives = 46/49 (93%)
 Frame = -1

Query: 148 TINVNKLVSAGCRVKIWVADWFAQLNNKMGGDLKKIRTIGEYLIEIWKA 2
           TI+VNKL SAGCRVKIW+ADWFAQLNNKMGGDLKKI T+G YLIEIWKA
Sbjct: 88  TISVNKLTSAGCRVKIWIADWFAQLNNKMGGDLKKIETVGRYLIEIWKA 136


>emb|CAN65657.1| hypothetical protein VITISV_000951 [Vitis vinifera]
          Length = 385

 Score =  101 bits (252), Expect(2) = 1e-42
 Identities = 45/55 (81%), Positives = 52/55 (94%)
 Frame = -3

Query: 410 LTLEERFKIVRSIGEECIQEDELMNLLEKKPQPIAYDGFEPSGRMHIAQGILKTI 246
           +TLEE+F+IVRS+GEECIQEDELMNLL  KP+PI YDGFEPSGRMHIAQG++KTI
Sbjct: 35  MTLEEKFRIVRSVGEECIQEDELMNLLRNKPEPICYDGFEPSGRMHIAQGVMKTI 89



 Score = 97.1 bits (240), Expect(2) = 1e-42
 Identities = 43/49 (87%), Positives = 46/49 (93%)
 Frame = -1

Query: 148 TINVNKLVSAGCRVKIWVADWFAQLNNKMGGDLKKIRTIGEYLIEIWKA 2
           TI+VNKL SAGCRVKIW+ADWFAQLNNKMGGDLKKI T+G YLIEIWKA
Sbjct: 88  TISVNKLTSAGCRVKIWIADWFAQLNNKMGGDLKKIETVGRYLIEIWKA 136


>ref|XP_002315391.1| predicted protein [Populus trichocarpa] gi|222864431|gb|EEF01562.1|
           predicted protein [Populus trichocarpa]
          Length = 345

 Score =  100 bits (250), Expect(2) = 1e-42
 Identities = 46/55 (83%), Positives = 52/55 (94%)
 Frame = -3

Query: 410 LTLEERFKIVRSIGEECIQEDELMNLLEKKPQPIAYDGFEPSGRMHIAQGILKTI 246
           L+LEERF++VRS+GEECIQEDEL NLLEKKP PI YDGFEPSGRMHIAQG++KTI
Sbjct: 1   LSLEERFQLVRSVGEECIQEDELRNLLEKKPLPICYDGFEPSGRMHIAQGVMKTI 55



 Score = 97.8 bits (242), Expect(2) = 1e-42
 Identities = 42/49 (85%), Positives = 47/49 (95%)
 Frame = -1

Query: 148 TINVNKLVSAGCRVKIWVADWFAQLNNKMGGDLKKIRTIGEYLIEIWKA 2
           TINVNKL  AGC++KIW+ADWFAQLNNKMGGDLKKI+T+GEYLIEIWKA
Sbjct: 54  TINVNKLTKAGCKMKIWIADWFAQLNNKMGGDLKKIKTVGEYLIEIWKA 102


>ref|XP_002310952.1| predicted protein [Populus trichocarpa] gi|222850772|gb|EEE88319.1|
           predicted protein [Populus trichocarpa]
          Length = 352

 Score = 99.0 bits (245), Expect(2) = 2e-42
 Identities = 44/55 (80%), Positives = 52/55 (94%)
 Frame = -3

Query: 410 LTLEERFKIVRSIGEECIQEDELMNLLEKKPQPIAYDGFEPSGRMHIAQGILKTI 246
           ++LEERF++VRS+GEECIQEDEL NLL+KKP PI YDGFEPSGRMHIAQG++KTI
Sbjct: 1   MSLEERFQLVRSVGEECIQEDELRNLLDKKPLPICYDGFEPSGRMHIAQGVMKTI 55



 Score = 99.0 bits (245), Expect(2) = 2e-42
 Identities = 43/49 (87%), Positives = 47/49 (95%)
 Frame = -1

Query: 148 TINVNKLVSAGCRVKIWVADWFAQLNNKMGGDLKKIRTIGEYLIEIWKA 2
           TINVNKL  AGC+VKIW+ADWFAQLNNKMGGDLKKI+T+GEYLIEIWKA
Sbjct: 54  TINVNKLTKAGCKVKIWIADWFAQLNNKMGGDLKKIKTVGEYLIEIWKA 102


>emb|CAA71881.1| Tyrosyl-tRNA synthetase [Nicotiana tabacum]
          Length = 408

 Score =  102 bits (253), Expect(2) = 6e-42
 Identities = 46/55 (83%), Positives = 52/55 (94%)
 Frame = -3

Query: 410 LTLEERFKIVRSIGEECIQEDELMNLLEKKPQPIAYDGFEPSGRMHIAQGILKTI 246
           ++LEE+FKIVRSIGEECIQEDELMNLL KKPQP+ YDGFEPSGRMHIAQG+LK +
Sbjct: 58  MSLEEKFKIVRSIGEECIQEDELMNLLAKKPQPVCYDGFEPSGRMHIAQGVLKAL 112



 Score = 94.0 bits (232), Expect(2) = 6e-42
 Identities = 40/48 (83%), Positives = 45/48 (93%)
 Frame = -1

Query: 145 INVNKLVSAGCRVKIWVADWFAQLNNKMGGDLKKIRTIGEYLIEIWKA 2
           +NVNKL SAGC+VKIW+ADWFAQLNNKMGGDLKKI  +G+YLIEIWKA
Sbjct: 112 LNVNKLTSAGCKVKIWIADWFAQLNNKMGGDLKKIEVVGQYLIEIWKA 159


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