BLASTX nr result
ID: Coptis24_contig00014113
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00014113 (1690 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003551381.1| PREDICTED: F-box/FBD/LRR-repeat protein At5g... 120 8e-25 ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|2... 114 8e-23 ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatul... 111 7e-22 ref|XP_003599874.1| F-box family-3 [Medicago truncatula] gi|3554... 110 9e-22 ref|XP_002331320.1| f-box family protein [Populus trichocarpa] g... 107 1e-20 >ref|XP_003551381.1| PREDICTED: F-box/FBD/LRR-repeat protein At5g56420-like [Glycine max] Length = 409 Score = 120 bits (302), Expect = 8e-25 Identities = 119/432 (27%), Positives = 184/432 (42%), Gaps = 22/432 (5%) Frame = +1 Query: 196 DRISDLPLHVLHHILSFLPTEHAVRTCLLSSYWRNIWRFVHTLYFDESFDDTIEEKPQFD 375 DRIS LP +L ILS LPT+ AV T +LS WR +W V L FD+ E P+F Sbjct: 20 DRISHLPDVLLLQILSLLPTKQAVITGILSKRWRPLWPAVSVLDFDD------ESSPEFH 73 Query: 376 -------FTKFVDSVLILRDPSHLQKLHLNLVDLSVGESRVNIWIRYSMNHNVEVIDIVN 534 F +FV SVL+L D +++ L + + + W+ + E +++ Sbjct: 74 HPGGLTGFAEFVYSVLLLHDAPAIERFRLRCANPNYSARDIATWLCHVARRRAERVELSL 133 Query: 535 ESHGYFDLTPCIFTCESLREFKLNGNSLNLSAS--ICLPALKVMHLYE-VCFENGQLGEA 705 Y L C+F C+++ KLNG LN AS + LP LKV+H+ + V F Sbjct: 134 SLSRYVALPRCLFHCDTVSVMKLNGVFLNALASFSVSLPLLKVLHVGDRVLFGCHDYVVK 193 Query: 706 FFSSIPSLETLILEDCIFDDYDIELITIFACQLKTLIMNGDYPRSVEIFAPVLISLELNS 885 + P+LE L+LE D AC ++ E N Sbjct: 194 LLAGCPALEDLVLESTYND----------ACG-------------------GVVCAEGN- 223 Query: 886 DDSTPESIRFKSDIIHLKDVKV--SLPASCFESIIQLFTVLKNAHSLALRGRFLLSFTHE 1059 F+ D+ HL K+ S C +S++ +F L N L+L + H Sbjct: 224 ---------FQLDLKHLSSAKIGFSWKERCLKSMLLIFRALSNVRCLSLSTSTVACLKH- 273 Query: 1060 LLVAPFLLECIQASSCNL----RWLKLGTEFSNAEILAINTILSHSHQVETIKLVNEVSK 1227 AS+ ++ + ++L F N + ++L SH++E + + E K Sbjct: 274 ------------ASTSDIPVFDKLIQLEISFGNYSWDLLASLLQRSHKLEVLTIYKEPQK 321 Query: 1228 DECGTTTGKYFQAEKVWLKYKLP-----HLKSVEIQDFRGSENEMKFVKVILENAVSLEK 1392 G E W+ L HLK+ +++++G E E+ FV I++NA LE Sbjct: 322 YAKGQ--------EPRWIHPLLVPECLLHLKTFCLREYQGLETELDFVGYIMQNARVLET 373 Query: 1393 LVITASYS-GSE 1425 + I S S GSE Sbjct: 374 MTIYISSSLGSE 385 >ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|222873904|gb|EEF11035.1| predicted protein [Populus trichocarpa] Length = 378 Score = 114 bits (285), Expect = 8e-23 Identities = 117/371 (31%), Positives = 165/371 (44%), Gaps = 36/371 (9%) Frame = +1 Query: 181 MRNRVDRISDLPLHVLHHILSFLPTEHAVRTCLLSSYWRNIWRFVHTLYFD-ESFDDTIE 357 + N DRIS LP +LH ILSF+ V+TC+LS W N+W+ L F+ E+F I Sbjct: 11 LNNNEDRISTLPNVLLHRILSFVDAVQVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLIN 70 Query: 358 ----EKPQFDFTKFVDSVLILRDPSHLQKLHLNLVDLSVGESRVNIWIRYSMNHNVEVID 525 E +FT F++ VL+ R+ K+ L+L S V I Y++ H+ E I Sbjct: 71 SDYYEDEMVNFTDFINQVLVRRNNFKAIKISLDLCG-HTRYSLVESLIYYAVKHHAEEIC 129 Query: 526 IVNESHGYFDLTP-CIFTCESLREFKLN-GNSLNLSASICLPALKVMHLYEVCFENGQLG 699 I + P C F CESLR KL + L S+ LP+LK +HL +G++ Sbjct: 130 IDTACRDVPIVLPRCFFNCESLRSLKLRIDGGIALPKSLGLPSLKTLHLGGAQNFDGKI- 188 Query: 700 EAFFSSIPSLETLILEDCIFDDYDIELITIFACQLKTL-IMNGDYPR-----SVEIFAPV 861 FSS P+LE L +ED + IE I A LK+L I+N Y R V +FAP Sbjct: 189 ---FSSCPNLENLTIEDICLN--TIENFNIHALNLKSLEILNWRYSRIMRGCKVMLFAPK 243 Query: 862 LISLELNSDDSTPESIRFKSDIIHLKDVKVSLPASCFESIIQLFT--------------- 996 L S + D +TP + ++ L DV V L + Q + Sbjct: 244 LTSFKF--DGNTP-LFWSEVNLTSLDDVNVVLQRYYYRHDYQFYVDEDEYISGEDETKQG 300 Query: 997 ----VLKNAHSLALRGRFLLSFT--HELLVAPFLLECIQASSCNLRWLKLGTEFSNAEIL 1158 +LK H LS L P L + NL++LKL T+ + + Sbjct: 301 FCLDLLKMLHQFCSAKSLTLSMNIIEVLSKVPAALNKHPSPFSNLKYLKLKTDHKDVTLP 360 Query: 1159 A--INTILSHS 1185 A +N LS S Sbjct: 361 AHVLNYFLSSS 371 >ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatula] gi|355508694|gb|AES89836.1| F-box/LRR-repeat protein [Medicago truncatula] Length = 467 Score = 111 bits (277), Expect = 7e-22 Identities = 112/442 (25%), Positives = 194/442 (43%), Gaps = 16/442 (3%) Frame = +1 Query: 196 DRISDLPLHVLHHILSFLPTEHAVRTCLLSSYWRNIWRFVHTLYFDESFDDTIEEKPQFD 375 D ISDLP +L++ILS L TE AVRT +L++ WR +W + F +S + P Sbjct: 23 DMISDLPEGILYYILSRLSTEEAVRTSILATKWRYLWTQLPVFDFRDSSPKRNSKSPDC- 81 Query: 376 FTKFVDSVLILRDPSHLQKLHLNLVDLSVGESRVNIWIRYSMNHNVEVIDIVNESHGYFD 555 VD +L + ++KL + L V +V+ + ++ H+V + + ES Sbjct: 82 LVDLVDQ--LLHKSNRIKKLFIELPVTIVDAGKVSSMLSSALMHDVHDLTLNLESENSRF 139 Query: 556 LTPCIFTC-ESLREFKLNGNSL-NLSASICLPALKVMHLYEVCFENGQLGEAFFSSIPSL 729 + P F+ SL + + L ++ IC P+LK++ V F N + + FS P L Sbjct: 140 VLPNSFSASRSLTKLDIVFGFLDSVPDGICFPSLKILSFAHVTFTNEKSAQRLFSGCPVL 199 Query: 730 ETLILEDCIFDDYDIELITIFACQLKTLIMNGDYPRSVEIFAPVLISLELNSDDSTPESI 909 + L E C + + +I + +L + R+ +F ++L S S P Sbjct: 200 QDLSFEKCYWVNINISVAIPTLKKLDIFFRSSSLDRNSCMFKIDAVNLLSLSYKSNPTIN 259 Query: 910 RFKSDIIHLKDVKVSLPASCFES--------IIQLFTVLKNAHSLALRGRFLLSFTHELL 1065 F + + D + L C ++ I+LF+ L + SL L + + + Sbjct: 260 CFLVNSTSIVDANIDLGFFCVQNNELHVAVFAIELFSRLGSVESLRLSDQTIQCLNYAKS 319 Query: 1066 VAPFLLECIQASSCNLRWLKLGTEFSNAEILAINTILSHSHQVETIKLVNEVSKDECGTT 1245 L S NL L++ + + E+LA IL S ++E + + + Sbjct: 320 ALHLL-----PSFKNLTRLEVHFDDPSCEVLA--DILRKSPKLEFLHIYGVHLVSCSRFS 372 Query: 1246 TGKYFQAE-KVWLKYKLP-----HLKSVEIQDFRGSENEMKFVKVILENAVSLEKLVITA 1407 +G Y + + W LP LKS +I DFRG E E++ VK +LEN L ++ I Sbjct: 373 SGSYLSLDSEDWTSDSLPCCFKSSLKSCDISDFRGDEAEIRLVKFLLENVTLLREMNIYC 432 Query: 1408 SYSGSETMTEFINRKNKMVETG 1473 + S+ + + +N++ G Sbjct: 433 TGYLSKKSKKLADVRNQLQALG 454 >ref|XP_003599874.1| F-box family-3 [Medicago truncatula] gi|355488922|gb|AES70125.1| F-box family-3 [Medicago truncatula] Length = 642 Score = 110 bits (276), Expect = 9e-22 Identities = 120/450 (26%), Positives = 207/450 (46%), Gaps = 23/450 (5%) Frame = +1 Query: 181 MRNRVDRISDLPLHVLHHILSFLPTEHAVRTCLLSSYWRNIWRFVHTLYFDESFDDTIEE 360 M + +D ISDLP VL HILS LPT+ VRT +L+ W+++W ++ +F E+F E Sbjct: 177 MDDMIDMISDLPEAVLLHILSLLPTKDVVRTSILAKKWKHLWTYLSAFHF-ETFRRLNES 235 Query: 361 KPQFDFTK---FVDSV-LILRDPSHLQKLHLNLVDLSVGESRVNIWIRYSMNHNVEVIDI 528 Q K +D V ++ + +++L + + S+ +V+ I + NH ++ +D+ Sbjct: 236 SLQNQKNKANCLLDLVGRLMHKSTRIERLGVQIFRSSIDTDKVSSIISSAANHKLQYLDL 295 Query: 529 -VNESHGYFDLTPCIFTCESLREFKLNGN-SLNLSASICLPALKVMHLYEVCFENGQLGE 702 + + + F L ESL E +L +L++ + IC P LK + + V F N + Sbjct: 296 SLGDRNDNFVLPHSFPAFESLNELRLGLQFTLHIPSGICFPILKTLVVTNVTFANENSAQ 355 Query: 703 AFFSSIPSLETLILEDCIFD---DYDIELITIFACQLKTLIMNGDYPR--SVEIFAPVLI 867 FS P L+ L L++C ++ + + T+ + L++ DY ++I A L+ Sbjct: 356 QLFSGCPVLQELELDNCYWEHINQISLSISTLRKLTISYLMLCVDYDHIMKLKIDAVNLL 415 Query: 868 SLELNSD---DSTPESIRFKSD-IIHLKDVKVSLPASCFESIIQLFTVLKNAHSLALRGR 1035 SL + + P ++ D I L V + I+L L + SL L Sbjct: 416 SLYCICNPIIEVIPVNLTSLVDAFIFLGYVYPHDEPYAAQCSIELLKGLGSVKSLKLNDI 475 Query: 1036 FLLSFTHELLVAPFLLECIQASSCNLRWLKLGTEFSNAEILAINTILSHSHQVETIKLVN 1215 L+SF H L + +L L L T F N L + ++ + + ++ Sbjct: 476 ILMSFYHTL------------DNLHLHLLPLPT-FYNLTHLYVCSVSPGNACALVMDILR 522 Query: 1216 EVSKDECGTTTG---KYFQAEKVWLKYKLP-----HLKSVEIQDFRGSENEMKFVKVILE 1371 + K E T G Y ++ + L LP LK + +F G+ +E+KFV ILE Sbjct: 523 KTPKLEDLTIPGVVLNYLDSDDLILN-SLPCCFKSSLKRLCFLNFHGNVHEIKFVTFILE 581 Query: 1372 NAVSLEKLVITASYSGSETMTEFINRKNKM 1461 NA LE++ I S S M + + +N++ Sbjct: 582 NAPYLEEIKIHCSRHLSADMEKLDDVRNQL 611 >ref|XP_002331320.1| f-box family protein [Populus trichocarpa] gi|222873903|gb|EEF11034.1| f-box family protein [Populus trichocarpa] Length = 453 Score = 107 bits (267), Expect = 1e-20 Identities = 102/275 (37%), Positives = 136/275 (49%), Gaps = 16/275 (5%) Frame = +1 Query: 181 MRNRVDRISDLPLHVLHHILSFLPTEHAVRTCLLSSYWRNIWRFVHTLYFD-ESFDDTIE 357 + N DRIS LP +LHHILSF+ V+TC+LS W N+W+ L F+ E+F I Sbjct: 30 LNNNEDRISTLPNVLLHHILSFVDAVQVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLIN 89 Query: 358 ----EKPQFDFTKFVDSVLILRDPSHLQKLHLNLVDLSVGESRVNIWIRYSMNHNVEVID 525 + +FT F+ VL+ R+ KL L+ S V I Y++ H+VE I Sbjct: 90 SDYYDDDMNNFTDFIYHVLVRRNNVKAFKLSLD-TRRDCQYSVVESLIYYAVKHHVEEIS 148 Query: 526 IVNESHGYFD--LTPCIFTCESLREFKLN-GNSLNLSASICLPALKVMHLYEVCFENGQL 696 I N +H L C F CESLR KL L L S+ L +LK +HL +G++ Sbjct: 149 I-NTAHWDVPIVLPRCFFDCESLRSLKLKVDGGLALPKSLGLQSLKTLHLGGAQNFDGKI 207 Query: 697 GEAFFSSIPSLETLILEDCIFDDYDIELITIFACQLKTL-IMNGDYPR-----SVEIFAP 858 FSS P+LE L +ED + IE I A LK+L I+N Y R V + AP Sbjct: 208 ----FSSCPNLENLTIEDICLN--VIENFNIHALSLKSLEILNWRYNRIKQGCKVMLVAP 261 Query: 859 VLISLELNSDDSTPESIRFKSDI--IHLKDVKVSL 957 L S + D +TP F SD+ L DV V L Sbjct: 262 KLTSFKF--DGNTP---LFWSDVNLTSLDDVNVVL 291