BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014113
         (1690 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551381.1| PREDICTED: F-box/FBD/LRR-repeat protein At5g...   120   8e-25
ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|2...   114   8e-23
ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatul...   111   7e-22
ref|XP_003599874.1| F-box family-3 [Medicago truncatula] gi|3554...   110   9e-22
ref|XP_002331320.1| f-box family protein [Populus trichocarpa] g...   107   1e-20

>ref|XP_003551381.1| PREDICTED: F-box/FBD/LRR-repeat protein At5g56420-like [Glycine max]
          Length = 409

 Score =  120 bits (302), Expect = 8e-25
 Identities = 119/432 (27%), Positives = 184/432 (42%), Gaps = 22/432 (5%)
 Frame = +1

Query: 196  DRISDLPLHVLHHILSFLPTEHAVRTCLLSSYWRNIWRFVHTLYFDESFDDTIEEKPQFD 375
            DRIS LP  +L  ILS LPT+ AV T +LS  WR +W  V  L FD+      E  P+F 
Sbjct: 20   DRISHLPDVLLLQILSLLPTKQAVITGILSKRWRPLWPAVSVLDFDD------ESSPEFH 73

Query: 376  -------FTKFVDSVLILRDPSHLQKLHLNLVDLSVGESRVNIWIRYSMNHNVEVIDIVN 534
                   F +FV SVL+L D   +++  L   + +     +  W+ +      E +++  
Sbjct: 74   HPGGLTGFAEFVYSVLLLHDAPAIERFRLRCANPNYSARDIATWLCHVARRRAERVELSL 133

Query: 535  ESHGYFDLTPCIFTCESLREFKLNGNSLNLSAS--ICLPALKVMHLYE-VCFENGQLGEA 705
                Y  L  C+F C+++   KLNG  LN  AS  + LP LKV+H+ + V F        
Sbjct: 134  SLSRYVALPRCLFHCDTVSVMKLNGVFLNALASFSVSLPLLKVLHVGDRVLFGCHDYVVK 193

Query: 706  FFSSIPSLETLILEDCIFDDYDIELITIFACQLKTLIMNGDYPRSVEIFAPVLISLELNS 885
              +  P+LE L+LE    D          AC                     ++  E N 
Sbjct: 194  LLAGCPALEDLVLESTYND----------ACG-------------------GVVCAEGN- 223

Query: 886  DDSTPESIRFKSDIIHLKDVKV--SLPASCFESIIQLFTVLKNAHSLALRGRFLLSFTHE 1059
                     F+ D+ HL   K+  S    C +S++ +F  L N   L+L    +    H 
Sbjct: 224  ---------FQLDLKHLSSAKIGFSWKERCLKSMLLIFRALSNVRCLSLSTSTVACLKH- 273

Query: 1060 LLVAPFLLECIQASSCNL----RWLKLGTEFSNAEILAINTILSHSHQVETIKLVNEVSK 1227
                        AS+ ++    + ++L   F N     + ++L  SH++E + +  E  K
Sbjct: 274  ------------ASTSDIPVFDKLIQLEISFGNYSWDLLASLLQRSHKLEVLTIYKEPQK 321

Query: 1228 DECGTTTGKYFQAEKVWLKYKLP-----HLKSVEIQDFRGSENEMKFVKVILENAVSLEK 1392
               G         E  W+   L      HLK+  +++++G E E+ FV  I++NA  LE 
Sbjct: 322  YAKGQ--------EPRWIHPLLVPECLLHLKTFCLREYQGLETELDFVGYIMQNARVLET 373

Query: 1393 LVITASYS-GSE 1425
            + I  S S GSE
Sbjct: 374  MTIYISSSLGSE 385


>ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|222873904|gb|EEF11035.1|
            predicted protein [Populus trichocarpa]
          Length = 378

 Score =  114 bits (285), Expect = 8e-23
 Identities = 117/371 (31%), Positives = 165/371 (44%), Gaps = 36/371 (9%)
 Frame = +1

Query: 181  MRNRVDRISDLPLHVLHHILSFLPTEHAVRTCLLSSYWRNIWRFVHTLYFD-ESFDDTIE 357
            + N  DRIS LP  +LH ILSF+     V+TC+LS  W N+W+    L F+ E+F   I 
Sbjct: 11   LNNNEDRISTLPNVLLHRILSFVDAVQVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLIN 70

Query: 358  ----EKPQFDFTKFVDSVLILRDPSHLQKLHLNLVDLSVGESRVNIWIRYSMNHNVEVID 525
                E    +FT F++ VL+ R+     K+ L+L       S V   I Y++ H+ E I 
Sbjct: 71   SDYYEDEMVNFTDFINQVLVRRNNFKAIKISLDLCG-HTRYSLVESLIYYAVKHHAEEIC 129

Query: 526  IVNESHGYFDLTP-CIFTCESLREFKLN-GNSLNLSASICLPALKVMHLYEVCFENGQLG 699
            I         + P C F CESLR  KL     + L  S+ LP+LK +HL      +G++ 
Sbjct: 130  IDTACRDVPIVLPRCFFNCESLRSLKLRIDGGIALPKSLGLPSLKTLHLGGAQNFDGKI- 188

Query: 700  EAFFSSIPSLETLILEDCIFDDYDIELITIFACQLKTL-IMNGDYPR-----SVEIFAPV 861
               FSS P+LE L +ED   +   IE   I A  LK+L I+N  Y R      V +FAP 
Sbjct: 189  ---FSSCPNLENLTIEDICLN--TIENFNIHALNLKSLEILNWRYSRIMRGCKVMLFAPK 243

Query: 862  LISLELNSDDSTPESIRFKSDIIHLKDVKVSLPASCFESIIQLFT--------------- 996
            L S +   D +TP     + ++  L DV V L    +    Q +                
Sbjct: 244  LTSFKF--DGNTP-LFWSEVNLTSLDDVNVVLQRYYYRHDYQFYVDEDEYISGEDETKQG 300

Query: 997  ----VLKNAHSLALRGRFLLSFT--HELLVAPFLLECIQASSCNLRWLKLGTEFSNAEIL 1158
                +LK  H         LS      L   P  L    +   NL++LKL T+  +  + 
Sbjct: 301  FCLDLLKMLHQFCSAKSLTLSMNIIEVLSKVPAALNKHPSPFSNLKYLKLKTDHKDVTLP 360

Query: 1159 A--INTILSHS 1185
            A  +N  LS S
Sbjct: 361  AHVLNYFLSSS 371


>ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatula]
            gi|355508694|gb|AES89836.1| F-box/LRR-repeat protein
            [Medicago truncatula]
          Length = 467

 Score =  111 bits (277), Expect = 7e-22
 Identities = 112/442 (25%), Positives = 194/442 (43%), Gaps = 16/442 (3%)
 Frame = +1

Query: 196  DRISDLPLHVLHHILSFLPTEHAVRTCLLSSYWRNIWRFVHTLYFDESFDDTIEEKPQFD 375
            D ISDLP  +L++ILS L TE AVRT +L++ WR +W  +    F +S      + P   
Sbjct: 23   DMISDLPEGILYYILSRLSTEEAVRTSILATKWRYLWTQLPVFDFRDSSPKRNSKSPDC- 81

Query: 376  FTKFVDSVLILRDPSHLQKLHLNLVDLSVGESRVNIWIRYSMNHNVEVIDIVNESHGYFD 555
                VD   +L   + ++KL + L    V   +V+  +  ++ H+V  + +  ES     
Sbjct: 82   LVDLVDQ--LLHKSNRIKKLFIELPVTIVDAGKVSSMLSSALMHDVHDLTLNLESENSRF 139

Query: 556  LTPCIFTC-ESLREFKLNGNSL-NLSASICLPALKVMHLYEVCFENGQLGEAFFSSIPSL 729
            + P  F+   SL +  +    L ++   IC P+LK++    V F N +  +  FS  P L
Sbjct: 140  VLPNSFSASRSLTKLDIVFGFLDSVPDGICFPSLKILSFAHVTFTNEKSAQRLFSGCPVL 199

Query: 730  ETLILEDCIFDDYDIELITIFACQLKTLIMNGDYPRSVEIFAPVLISLELNSDDSTPESI 909
            + L  E C + + +I +      +L     +    R+  +F    ++L   S  S P   
Sbjct: 200  QDLSFEKCYWVNINISVAIPTLKKLDIFFRSSSLDRNSCMFKIDAVNLLSLSYKSNPTIN 259

Query: 910  RFKSDIIHLKDVKVSLPASCFES--------IIQLFTVLKNAHSLALRGRFLLSFTHELL 1065
             F  +   + D  + L   C ++         I+LF+ L +  SL L  + +    +   
Sbjct: 260  CFLVNSTSIVDANIDLGFFCVQNNELHVAVFAIELFSRLGSVESLRLSDQTIQCLNYAKS 319

Query: 1066 VAPFLLECIQASSCNLRWLKLGTEFSNAEILAINTILSHSHQVETIKLVNEVSKDECGTT 1245
                L      S  NL  L++  +  + E+LA   IL  S ++E + +           +
Sbjct: 320  ALHLL-----PSFKNLTRLEVHFDDPSCEVLA--DILRKSPKLEFLHIYGVHLVSCSRFS 372

Query: 1246 TGKYFQAE-KVWLKYKLP-----HLKSVEIQDFRGSENEMKFVKVILENAVSLEKLVITA 1407
            +G Y   + + W    LP      LKS +I DFRG E E++ VK +LEN   L ++ I  
Sbjct: 373  SGSYLSLDSEDWTSDSLPCCFKSSLKSCDISDFRGDEAEIRLVKFLLENVTLLREMNIYC 432

Query: 1408 SYSGSETMTEFINRKNKMVETG 1473
            +   S+   +  + +N++   G
Sbjct: 433  TGYLSKKSKKLADVRNQLQALG 454


>ref|XP_003599874.1| F-box family-3 [Medicago truncatula] gi|355488922|gb|AES70125.1|
            F-box family-3 [Medicago truncatula]
          Length = 642

 Score =  110 bits (276), Expect = 9e-22
 Identities = 120/450 (26%), Positives = 207/450 (46%), Gaps = 23/450 (5%)
 Frame = +1

Query: 181  MRNRVDRISDLPLHVLHHILSFLPTEHAVRTCLLSSYWRNIWRFVHTLYFDESFDDTIEE 360
            M + +D ISDLP  VL HILS LPT+  VRT +L+  W+++W ++   +F E+F    E 
Sbjct: 177  MDDMIDMISDLPEAVLLHILSLLPTKDVVRTSILAKKWKHLWTYLSAFHF-ETFRRLNES 235

Query: 361  KPQFDFTK---FVDSV-LILRDPSHLQKLHLNLVDLSVGESRVNIWIRYSMNHNVEVIDI 528
              Q    K    +D V  ++   + +++L + +   S+   +V+  I  + NH ++ +D+
Sbjct: 236  SLQNQKNKANCLLDLVGRLMHKSTRIERLGVQIFRSSIDTDKVSSIISSAANHKLQYLDL 295

Query: 529  -VNESHGYFDLTPCIFTCESLREFKLNGN-SLNLSASICLPALKVMHLYEVCFENGQLGE 702
             + + +  F L       ESL E +L    +L++ + IC P LK + +  V F N    +
Sbjct: 296  SLGDRNDNFVLPHSFPAFESLNELRLGLQFTLHIPSGICFPILKTLVVTNVTFANENSAQ 355

Query: 703  AFFSSIPSLETLILEDCIFD---DYDIELITIFACQLKTLIMNGDYPR--SVEIFAPVLI 867
              FS  P L+ L L++C ++      + + T+    +  L++  DY     ++I A  L+
Sbjct: 356  QLFSGCPVLQELELDNCYWEHINQISLSISTLRKLTISYLMLCVDYDHIMKLKIDAVNLL 415

Query: 868  SLELNSD---DSTPESIRFKSD-IIHLKDVKVSLPASCFESIIQLFTVLKNAHSLALRGR 1035
            SL    +   +  P ++    D  I L  V         +  I+L   L +  SL L   
Sbjct: 416  SLYCICNPIIEVIPVNLTSLVDAFIFLGYVYPHDEPYAAQCSIELLKGLGSVKSLKLNDI 475

Query: 1036 FLLSFTHELLVAPFLLECIQASSCNLRWLKLGTEFSNAEILAINTILSHSHQVETIKLVN 1215
             L+SF H L             + +L  L L T F N   L + ++   +     + ++ 
Sbjct: 476  ILMSFYHTL------------DNLHLHLLPLPT-FYNLTHLYVCSVSPGNACALVMDILR 522

Query: 1216 EVSKDECGTTTG---KYFQAEKVWLKYKLP-----HLKSVEIQDFRGSENEMKFVKVILE 1371
            +  K E  T  G    Y  ++ + L   LP      LK +   +F G+ +E+KFV  ILE
Sbjct: 523  KTPKLEDLTIPGVVLNYLDSDDLILN-SLPCCFKSSLKRLCFLNFHGNVHEIKFVTFILE 581

Query: 1372 NAVSLEKLVITASYSGSETMTEFINRKNKM 1461
            NA  LE++ I  S   S  M +  + +N++
Sbjct: 582  NAPYLEEIKIHCSRHLSADMEKLDDVRNQL 611


>ref|XP_002331320.1| f-box family protein [Populus trichocarpa]
           gi|222873903|gb|EEF11034.1| f-box family protein
           [Populus trichocarpa]
          Length = 453

 Score =  107 bits (267), Expect = 1e-20
 Identities = 102/275 (37%), Positives = 136/275 (49%), Gaps = 16/275 (5%)
 Frame = +1

Query: 181 MRNRVDRISDLPLHVLHHILSFLPTEHAVRTCLLSSYWRNIWRFVHTLYFD-ESFDDTIE 357
           + N  DRIS LP  +LHHILSF+     V+TC+LS  W N+W+    L F+ E+F   I 
Sbjct: 30  LNNNEDRISTLPNVLLHHILSFVDAVQVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLIN 89

Query: 358 ----EKPQFDFTKFVDSVLILRDPSHLQKLHLNLVDLSVGESRVNIWIRYSMNHNVEVID 525
               +    +FT F+  VL+ R+     KL L+        S V   I Y++ H+VE I 
Sbjct: 90  SDYYDDDMNNFTDFIYHVLVRRNNVKAFKLSLD-TRRDCQYSVVESLIYYAVKHHVEEIS 148

Query: 526 IVNESHGYFD--LTPCIFTCESLREFKLN-GNSLNLSASICLPALKVMHLYEVCFENGQL 696
           I N +H      L  C F CESLR  KL     L L  S+ L +LK +HL      +G++
Sbjct: 149 I-NTAHWDVPIVLPRCFFDCESLRSLKLKVDGGLALPKSLGLQSLKTLHLGGAQNFDGKI 207

Query: 697 GEAFFSSIPSLETLILEDCIFDDYDIELITIFACQLKTL-IMNGDYPR-----SVEIFAP 858
               FSS P+LE L +ED   +   IE   I A  LK+L I+N  Y R      V + AP
Sbjct: 208 ----FSSCPNLENLTIEDICLN--VIENFNIHALSLKSLEILNWRYNRIKQGCKVMLVAP 261

Query: 859 VLISLELNSDDSTPESIRFKSDI--IHLKDVKVSL 957
            L S +   D +TP    F SD+    L DV V L
Sbjct: 262 KLTSFKF--DGNTP---LFWSDVNLTSLDDVNVVL 291