BLASTX nr result
ID: Coptis24_contig00014094
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00014094
(1857 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI29641.3| unnamed protein product [Vitis vinifera] 283 8e-74
ref|XP_002527847.1| U2 snrnp auxiliary factor, small subunit, pu... 283 8e-74
ref|XP_002268270.1| PREDICTED: uncharacterized protein LOC100247... 282 2e-73
gb|EEE57196.1| hypothetical protein OsJ_07143 [Oryza sativa Japo... 275 2e-71
sp|Q6YVX9.2|C3H16_ORYSJ RecName: Full=Zinc finger CCCH domain-co... 275 2e-71
>emb|CBI29641.3| unnamed protein product [Vitis vinifera]
Length = 875
Score = 283 bits (725), Expect = 8e-74
Identities = 206/545 (37%), Positives = 259/545 (47%), Gaps = 27/545 (4%)
Frame = -3
Query: 1855 DEEIARSYEEFYEDVHTEFLKFGEIFNFKVCKNGSFHLRGNVYVHYKSLESAIHAYRAIN 1676
DEE+ R YEEFYEDV TEFLKFGEI NFKVC+NGSFHLRGNVYVHYKSL+SA+ AY +IN
Sbjct: 281 DEEVERCYEEFYEDVQTEFLKFGEIVNFKVCRNGSFHLRGNVYVHYKSLDSAVLAYHSIN 340
Query: 1675 GRYFASKQITCEFVGVTRWRVAICGEYMKSRLKTCSRGTACNFIHCFQNPCGDYEWADWD 1496
G Y+A KQ+TCEFVGVTRW+VAICGEYMKSR KTCS GTACNFIHCF+NP GDYEWADWD
Sbjct: 341 GLYYAGKQVTCEFVGVTRWKVAICGEYMKSRFKTCSHGTACNFIHCFRNPGGDYEWADWD 400
Query: 1495 NPPPRYWVEKMVALFGPSDEVGSDKHMGQEHWSFPRDSKKIRLNHEXXXXXXXXXXXXXX 1316
PPPRYWV+ MVALFG +DE G DK + QE R +
Sbjct: 401 KPPPRYWVKNMVALFGLTDESGYDKEVKQESMGRRRSTSN-------------------- 440
Query: 1315 XXXXXXXXXXXRNRYLLSTPSNREEG---SAISRKMISSTDESKR-YEENSKSEGVDRYK 1148
+RY +RE G +R+ D K Y + S+G K
Sbjct: 441 ------AGTVDADRYHSRRSRSRESGYSHGEYARRQFDENDAHKNVYYQRHTSDG---RK 491
Query: 1147 EISIFQDHGSGDYSFKDRDKYYSRSRAHHRNEGRDHSDYHGNVKKKHGSSDCEGKDQLHC 968
I + ++ + F D YSRSR H+ D G+ +KHG + K H
Sbjct: 492 RIKMHEERYEEEAHF--GDNRYSRSRIHN---VESDGDLEGDKSRKHGHT---RKSLKHQ 543
Query: 967 HDSPRNYSDLGRKQKRTHS-SRRVYVTGRIKAEDIHAEH------KKSEISE-SNSPRLH 812
++ DLG H + R D H +H +S++SE SN R
Sbjct: 544 KEAMAVMDDLGDSNNSIHEPDSDGGWSDRDGDHDGHHDHTMKRLKNRSKMSEFSNDHRNS 603
Query: 811 GGRCDSHDSIETIDPSDRWESGTTVPCETDNSRSYSSEYNEPC----EKMHRPHLQSTGV 644
R D+ DS D S R G S + E +E +K R H
Sbjct: 604 KYRTDATDS--DGDSSHRNRQGDRYHSHRRKSSRHWDEVSETADDDEDKRKRTHDTDPTG 661
Query: 643 CFXXXXXXXXXXXXXXXSIKWSEERESPGEDLHSR-QDREHYHEKRVSRRGHKKDNKPLN 467
+ S WS++ E +++ Q +E EK R K +
Sbjct: 662 DWSDEVGERHQSKRRNCSRHWSDDHEETEKNVKDEFQGQEFDTEKPDVPRVQKHSHSSRK 721
Query: 466 EG-NSESFSSGDYRGE---SDIGHK---EDPSLRNSGGHHMQKRLSS---TDLQKDQRNR 317
+G N E S D+ E S+ H+ D R S ++ R S D + D
Sbjct: 722 DGSNKEMISRADFISEDKKSNGNHEASSSDQHGRRSKSYNPDSRYHSDENIDKEGDWEPE 781
Query: 316 KRRKS 302
K RKS
Sbjct: 782 KTRKS 786
>ref|XP_002527847.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus communis]
gi|223532771|gb|EEF34550.1| U2 snrnp auxiliary factor,
small subunit, putative [Ricinus communis]
Length = 857
Score = 283 bits (725), Expect = 8e-74
Identities = 190/523 (36%), Positives = 251/523 (47%), Gaps = 8/523 (1%)
Frame = -3
Query: 1855 DEEIARSYEEFYEDVHTEFLKFGEIFNFKVCKNGSFHLRGNVYVHYKSLESAIHAYRAIN 1676
DEE+ RSYEEFYEDVHTEFLK+GEI NFKVCKN SFHLRGNVYV YKSL+SA+ AY +IN
Sbjct: 272 DEEVERSYEEFYEDVHTEFLKYGEIVNFKVCKNSSFHLRGNVYVQYKSLDSAVLAYCSIN 331
Query: 1675 GRYFASKQITCEFVGVTRWRVAICGEYMKSRLKTCSRGTACNFIHCFQNPCGDYEWADWD 1496
GRYFA KQ+ CEFV VTRW+VAICGEYMKSRL+ CSRGTACNFIHCF+NP GDYEWADWD
Sbjct: 332 GRYFAGKQVNCEFVNVTRWKVAICGEYMKSRLQMCSRGTACNFIHCFRNPGGDYEWADWD 391
Query: 1495 NPPPRYWVEKMVALFGPSDEVGSDKHMGQEHWSFPRDSKKIRLNHEXXXXXXXXXXXXXX 1316
PPPRYW+EKM ALFG SDE DK M Q+ + PR S K
Sbjct: 392 KPPPRYWIEKMTALFGYSDESACDKQMEQDKFKQPRMSSK-------------------- 431
Query: 1315 XXXXXXXXXXXRNRYLLSTPSNREEGSAI--SRKMISSTDESKRYEENSKSEGVDRYKEI 1142
+R+ S +R+ ++ S K + D+ +R + +S+ D K+I
Sbjct: 432 ------RIPAYTDRHHSSRSRSRDIYYSLHYSGKSDNEDDDEERTHRHWRSD--DDRKQI 483
Query: 1141 SIFQDHGSGDYSFKDRDKYYSRSRAHHR------NEGRDHSDYHGNVKKKHGSSDCEGKD 980
I H Y +D + S ++H ++G +D N + HG
Sbjct: 484 HI---HDEKSYR---KDYHLSNRKSHDMISDGGWSDGDSEADRERNKRHGHG-------- 529
Query: 979 QLHCHDSPRNYSDLGRKQKRTHSSRRVYVTGRIKAEDIHAEHKKSEISESNSPRLHGGRC 800
H +++S++ K SS + + A D ++ E N+ H +
Sbjct: 530 --HVTKRSKHHSEV-TKHSTHWSSGKSKDSNHKAASDEWSDGDSGADRERNNCHGHVAKR 586
Query: 799 DSHDSIETIDPSDRWESGTTVPCETDNSRSYSSEYNEPCEKMHRPHLQSTGVCFXXXXXX 620
H S E S RW SG + + N + S E+++ + H +
Sbjct: 587 SKHQS-EVTKHSTRWSSGKS---KDSNHQENSDEWSDGGRNGQKEHSSAEVSEHRMKGVS 642
Query: 619 XXXXXXXXXSIKWSEERESPGEDLHSRQDREHYHEKRVSRRGHKKDNKPLNEGNSESFSS 440
++ +S E HSR R H+ +V D K N
Sbjct: 643 LDDNRNSTSKCSGADGYQSDREKHHSRMVRSSRHQSKVRSMDDLGDGKESNR-------- 694
Query: 439 GDYRGESDIGHKEDPSLRNSGGHHMQKRLSSTDLQKDQRNRKR 311
+ D + P + S H LS D +D R R R
Sbjct: 695 -----DEDRDRHDHPRKKRSRPHSRSSELS--DDYQDDRYRTR 730
>ref|XP_002268270.1| PREDICTED: uncharacterized protein LOC100247160 [Vitis vinifera]
Length = 887
Score = 282 bits (721), Expect = 2e-73
Identities = 184/524 (35%), Positives = 246/524 (46%), Gaps = 4/524 (0%)
Frame = -3
Query: 1855 DEEIARSYEEFYEDVHTEFLKFGEIFNFKVCKNGSFHLRGNVYVHYKSLESAIHAYRAIN 1676
DEE+ R YEEFYEDV TEFLKFGEI NFKVC+NGSFHLRGNVYVHYKSL+SA+ AY +IN
Sbjct: 257 DEEVERCYEEFYEDVQTEFLKFGEIVNFKVCRNGSFHLRGNVYVHYKSLDSAVLAYHSIN 316
Query: 1675 GRYFASKQITCEFVGVTRWRVAICGEYMKSRLKTCSRGTACNFIHCFQNPCGDYEWADWD 1496
G Y+A KQ+TCEFVGVTRW+VAICGEYMKSR KTCS GTACNFIHCF+NP GDYEWADWD
Sbjct: 317 GLYYAGKQVTCEFVGVTRWKVAICGEYMKSRFKTCSHGTACNFIHCFRNPGGDYEWADWD 376
Query: 1495 NPPPRYWVEKMVALFGPSDEVGSDKHMGQEHWSFPRDSKKIRLNHEXXXXXXXXXXXXXX 1316
PPPRYWV+ MVALFG +DE G DK + QE R +
Sbjct: 377 KPPPRYWVKNMVALFGLTDESGYDKEVKQESMGRRRSTSN-------------------- 416
Query: 1315 XXXXXXXXXXXRNRYLLSTPSNREEG---SAISRKMISSTDESKR-YEENSKSEGVDRYK 1148
+RY +RE G +R+ D K Y + S+G K
Sbjct: 417 ------AGTVDADRYHSRRSRSRESGYSHGEYARRQFDENDAHKNVYYQRHTSDG---RK 467
Query: 1147 EISIFQDHGSGDYSFKDRDKYYSRSRAHHRNEGRDHSDYHGNVKKKHGSSDCEGKDQLHC 968
I + ++ + F D YSRSR H N D + + +D K
Sbjct: 468 RIKMHEERYEEEAHF--GDNRYSRSRIH--NVESDGDLLRDGTRDRERHNDHRRKSSRQR 523
Query: 967 HDSPRNYSDLGRKQKRTHSSRRVYVTGRIKAEDIHAEHKKSEISESNSPRLHGGRCDSHD 788
+ D G ++ +T+ S + H +KS + + + DS++
Sbjct: 524 EKVLESPDDYGERKNKTYDSEGDWSDREGDKSRKHGHTRKSLKHQKEAMAVMDDLGDSNN 583
Query: 787 SIETIDPSDRWESGTTVPCETDNSRSYSSEYNEPCEKMHRPHLQSTGVCFXXXXXXXXXX 608
SI D W +D + ++ +++ S F
Sbjct: 584 SIHEPDSDGGW---------SDRDGDHDGHHDHTMKRLKNRSKMSE---FSNDHRNSKYR 631
Query: 607 XXXXXSIKWSEERESPGEDLHSRQDREHYHEKRVSRRGHKKDNKPLNEGNSESFSSGDYR 428
S S R G+ HS + + H VS ++K + ++ +GD+
Sbjct: 632 TDATDSDGDSSHRNRQGDRYHSHRRKSSRHWDEVSETADDDEDK--RKRTHDTDPTGDWS 689
Query: 427 GESDIGHKEDPSLRNSGGHHMQKRLSSTDLQKDQRNRKRRKSGE 296
E +G + RN H S D ++ ++N K G+
Sbjct: 690 DE--VGERHQSKRRNCSRHW------SDDHEETEKNVKDEFQGQ 725
>gb|EEE57196.1| hypothetical protein OsJ_07143 [Oryza sativa Japonica Group]
Length = 635
Score = 275 bits (704), Expect = 2e-71
Identities = 177/436 (40%), Positives = 216/436 (49%), Gaps = 33/436 (7%)
Frame = -3
Query: 1855 DEEIARSYEEFYEDVHTEFLKFGEIFNFKVCKNGSFHLRGNVYVHYKSLESAIHAYRAIN 1676
DEEI +SYEEFYEDVHTEFLKFGE+ NFKVC+NGS HLRGNVYVHYKSL+SA+ AY ++N
Sbjct: 177 DEEIEQSYEEFYEDVHTEFLKFGELVNFKVCRNGSLHLRGNVYVHYKSLDSALIAYSSMN 236
Query: 1675 GRYFASKQITCEFVGVTRWRVAICGEYMKSRLKTCSRGTACNFIHCFQNPCGDYEWADWD 1496
GRYFA KQITCEFV VTRW+VAICGEYM+SR KTCSRG ACNFIHCF+NP GDYEWADWD
Sbjct: 237 GRYFAGKQITCEFVAVTRWKVAICGEYMRSRFKTCSRGIACNFIHCFRNPGGDYEWADWD 296
Query: 1495 NPPPRYWVEKMVALFGPSDEVGSDKHMGQEHWSFPRDSKKIRLNHEXXXXXXXXXXXXXX 1316
NPPPRYW+ KM ALFGPSD+ K H + S + R
Sbjct: 297 NPPPRYWIRKMAALFGPSDDSIYGKPSDTPHLERSQSSDRRRPRSSDP------------ 344
Query: 1315 XXXXXXXXXXXRNRYLLSTPSNREEGSA----------ISRKMISSTDESKRYEENSKSE 1166
RY TPS + A S+ SS E +R + S +
Sbjct: 345 -------------RY---TPSRTRDEDAHKQHSSRDYSHSKHERSSHTEHRRDRKESSAS 388
Query: 1165 GVDRYKEISIFQDHGSGDYSFKDRDKYYSRSRAHHRNEGRDHSDYHGNVKKKHGSSDCEG 986
R++EI S + + Y R H + G HG V+ + S+ +
Sbjct: 389 DKHRHREIKDKTSKYSSNMESERESHKYMREEKHRIDHGNGGKGDHGKVRSRKNRSERQE 448
Query: 985 K-------------DQLHCHDSPRNYSDLGRKQKRT-------HSSRRVYVTGRIKAEDI 866
DQ +SP GR K+T HS+RR
Sbjct: 449 SLEPGSSGRSSDFIDQ-DTTESPSGSKSTGRHHKKTRRQSLEEHSTRR------------ 495
Query: 865 HAEHKKSEISESNSPRLHGGRCDSHDSIETIDPSDRW---ESGTTVPCETDNSRSYSSEY 695
+ H+ E + + R D HD+ + DRW S ET RS SSE
Sbjct: 496 SSRHRDME-DDGRGQSVAVKRKDHHDTSD-----DRWVATNSDVDSDLETQYQRS-SSEG 548
Query: 694 NEPCEKMHRPHLQSTG 647
++ K H TG
Sbjct: 549 SKLGMKYHARSDSETG 564
>sp|Q6YVX9.2|C3H16_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 16;
Short=OsC3H16
Length = 678
Score = 275 bits (704), Expect = 2e-71
Identities = 177/436 (40%), Positives = 216/436 (49%), Gaps = 33/436 (7%)
Frame = -3
Query: 1855 DEEIARSYEEFYEDVHTEFLKFGEIFNFKVCKNGSFHLRGNVYVHYKSLESAIHAYRAIN 1676
DEEI +SYEEFYEDVHTEFLKFGE+ NFKVC+NGS HLRGNVYVHYKSL+SA+ AY ++N
Sbjct: 220 DEEIEQSYEEFYEDVHTEFLKFGELVNFKVCRNGSLHLRGNVYVHYKSLDSALIAYSSMN 279
Query: 1675 GRYFASKQITCEFVGVTRWRVAICGEYMKSRLKTCSRGTACNFIHCFQNPCGDYEWADWD 1496
GRYFA KQITCEFV VTRW+VAICGEYM+SR KTCSRG ACNFIHCF+NP GDYEWADWD
Sbjct: 280 GRYFAGKQITCEFVAVTRWKVAICGEYMRSRFKTCSRGIACNFIHCFRNPGGDYEWADWD 339
Query: 1495 NPPPRYWVEKMVALFGPSDEVGSDKHMGQEHWSFPRDSKKIRLNHEXXXXXXXXXXXXXX 1316
NPPPRYW+ KM ALFGPSD+ K H + S + R
Sbjct: 340 NPPPRYWIRKMAALFGPSDDSIYGKPSDTPHLERSQSSDRRRPRSSDP------------ 387
Query: 1315 XXXXXXXXXXXRNRYLLSTPSNREEGSA----------ISRKMISSTDESKRYEENSKSE 1166
RY TPS + A S+ SS E +R + S +
Sbjct: 388 -------------RY---TPSRTRDEDAHKQHSSRDYSHSKHERSSHTEHRRDRKESSAS 431
Query: 1165 GVDRYKEISIFQDHGSGDYSFKDRDKYYSRSRAHHRNEGRDHSDYHGNVKKKHGSSDCEG 986
R++EI S + + Y R H + G HG V+ + S+ +
Sbjct: 432 DKHRHREIKDKTSKYSSNMESERESHKYMREEKHRIDHGNGGKGDHGKVRSRKNRSERQE 491
Query: 985 K-------------DQLHCHDSPRNYSDLGRKQKRT-------HSSRRVYVTGRIKAEDI 866
DQ +SP GR K+T HS+RR
Sbjct: 492 SLEPGSSGRSSDFIDQ-DTTESPSGSKSTGRHHKKTRRQSLEEHSTRR------------ 538
Query: 865 HAEHKKSEISESNSPRLHGGRCDSHDSIETIDPSDRW---ESGTTVPCETDNSRSYSSEY 695
+ H+ E + + R D HD+ + DRW S ET RS SSE
Sbjct: 539 SSRHRDME-DDGRGQSVAVKRKDHHDTSD-----DRWVATNSDVDSDLETQYQRS-SSEG 591
Query: 694 NEPCEKMHRPHLQSTG 647
++ K H TG
Sbjct: 592 SKLGMKYHARSDSETG 607