BLASTX nr result

ID: Coptis24_contig00014091 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014091
         (2699 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34055.3| unnamed protein product [Vitis vinifera]              259   3e-66
emb|CAN64936.1| hypothetical protein VITISV_021553 [Vitis vinifera]   250   1e-63
ref|XP_003593218.1| Methyl binding domain protein [Medicago trun...   214   1e-52
ref|XP_002525855.1| hypothetical protein RCOM_0824380 [Ricinus c...   214   1e-52
ref|XP_002300183.1| predicted protein [Populus trichocarpa] gi|2...   212   4e-52

>emb|CBI34055.3| unnamed protein product [Vitis vinifera]
          Length = 590

 Score =  259 bits (661), Expect = 3e-66
 Identities = 182/486 (37%), Positives = 241/486 (49%), Gaps = 15/486 (3%)
 Frame = +3

Query: 3    KLLLSLKRKEGSVSLYCRRYISPTGQQFVSCKEVSSYLLPYFGFQDENHPNSLHSDESEY 182
            KLLL LKR+EG VS+YCRRYISP+G+QFVSCKE ++YL  YFG  D N P     D  + 
Sbjct: 111  KLLLGLKRREGRVSVYCRRYISPSGEQFVSCKEAAAYLQSYFGLADTNQPMGQRDDNIQ- 169

Query: 183  DACRLSSGSSAGLTHKDASTKEDLXXXXXXXXXXXXXDHEKQLILLETENLAEVEIKDLL 362
               R+SS S AG THKD    ED+             ++EK++ LL  ENLAEVE++DL 
Sbjct: 170  QVNRISSESLAGSTHKDDDLGEDIIPISVLPSSSISYEYEKEVALLGIENLAEVEVRDLF 229

Query: 363  ECHICKMNFDEKDAYLQHLLSSHQKSAKRSRQSSTSVCDGVIIRDGKFECQFCHKIFDER 542
            ECH C M FDEKD YLQHLLSSHQ++ +R R   TSV DGVI++DGK+ECQFCHKIF ER
Sbjct: 230  ECHKCNMTFDEKDTYLQHLLSSHQRTTRRYR-LGTSVGDGVIVKDGKYECQFCHKIFQER 288

Query: 543  RRYNGHVGVHVRNYVRSLEATPGDKTKRVKVNXXXXXXXXXXXXRVDPSVEMDMGSDLPI 722
            RRYNGHVG+HVRNYVR+ E  PG  + +  V             ++D  +E+   S    
Sbjct: 289  RRYNGHVGIHVRNYVRNFEDMPGRPSVQKTVESPSRDELPSRTSKMDALIEIAQSSIFET 348

Query: 723  SLAGSKADIDSLGKLDEGSNWDMGSDPTFSAASNKANIGSRGKMDEESNQDMGSDPTFSA 902
            S A   A  D    +    N D+ S P    A            D E  Q++G       
Sbjct: 349  SAA---APSDEPNGVCTFGNPDVISTPEVPTA------------DSEHEQNLGF--CLGE 391

Query: 903  ASNKANIGSRGKMDEESNQDMGSDPPTSVTSEKANIDARSK-------LDAGSNLDMGSD 1061
               + +I +R  +DEE +Q  G        +EK N D+ +        LD  + L     
Sbjct: 392  PEMEDSITNR-TLDEELDQQEGDCVMADENTEKINGDSDAACIKMDCCLDTTTTLSTNDK 450

Query: 1062 PPASNEVNVDSHGKMDAGFNLEMS----TDPPTSLASNEANIESRDKLDAGFNLESLVEA 1229
               S+E     +G   +   +E S      P T L +  +N   +   D   N+  + E 
Sbjct: 451  NGCSSESFDGKYGVSFSNNEVEKSGFEQRSPETHLLTPSSN---QTVFDVENNMNDISEQ 507

Query: 1230 S----VEMDKGSGRVTFISGIGTDIHSHRKLDEGLNLDIYTEKSNSEQNSLRSNPDSVIY 1397
            S    VE  + SG      G G+     R  D        T + N  QN +  +   +++
Sbjct: 508  SKPGGVEEYENSG---LTRGYGSS-DIGRDNDVATMTMSQTPEDNVYQNRVSDSSMPLVH 563

Query: 1398 NLHSLP 1415
             LHS P
Sbjct: 564  PLHSFP 569


>emb|CAN64936.1| hypothetical protein VITISV_021553 [Vitis vinifera]
          Length = 849

 Score =  250 bits (639), Expect = 1e-63
 Identities = 178/486 (36%), Positives = 236/486 (48%), Gaps = 15/486 (3%)
 Frame = +3

Query: 3    KLLLSLKRKEGSVSLYCRRYISPTGQQFVSCKEVSSYLLPYFGFQDENHPNSLHSDESEY 182
            KLLL LKR+EG VS+YCRRYISP+G+QFVSCKE ++YL  YFG  D N P     D  + 
Sbjct: 257  KLLLGLKRREGRVSVYCRRYISPSGEQFVSCKEAAAYLQSYFGLADTNQPMGQRDDNIQ- 315

Query: 183  DACRLSSGSSAGLTHKDASTKEDLXXXXXXXXXXXXXDHEKQLILLETENLAEVEIKDLL 362
                      AG THKD    ED+             ++EK++ LL  ENLAEVE++DL 
Sbjct: 316  --------QLAGSTHKDDDLGEDIIPISVLPSSSISYEYEKEVALLGIENLAEVEVRDLF 367

Query: 363  ECHICKMNFDEKDAYLQHLLSSHQKSAKRSRQSSTSVCDGVIIRDGKFECQFCHKIFDER 542
            ECH C M FDEKD YLQHLLSSHQ++ +R R   TSV DGVI++DGK+ECQFCHKIF ER
Sbjct: 368  ECHKCNMTFDEKDTYLQHLLSSHQRTTRRYRLG-TSVGDGVIVKDGKYECQFCHKIFQER 426

Query: 543  RRYNGHVGVHVRNYVRSLEATPGDKTKRVKVNXXXXXXXXXXXXRVDPSVEMDMGSDLPI 722
            RRYNGHVG+HVRNYVR+ E  PG  + +  V             ++D  +E+   S    
Sbjct: 427  RRYNGHVGIHVRNYVRNFEDMPGRPSVQKTVESPSRDELPSRTSKMDALIEIAQSSIFET 486

Query: 723  SLAGSKADIDSLGKLDEGSNWDMGSDPTFSAASNKANIGSRGKMDEESNQDMGSDPTFSA 902
            S A   A  D    +    N D+ S P    A            D E  Q++G       
Sbjct: 487  SAA---APSDEPNGVCTFGNPDVISTPEVPTA------------DSEHEQNLGF--CLGE 529

Query: 903  ASNKANIGSRGKMDEESNQDMGSDPPTSVTSEKANIDARSK-------LDAGSNLDMGSD 1061
               + +I +R  +DEE +Q  G        +EK N D+ +        LD  + L     
Sbjct: 530  PEMEDSITNR-TLDEELDQQEGDCVMADENTEKINGDSDAACIKMDCCLDTTTTLSTNDK 588

Query: 1062 PPASNEVNVDSHGKMDAGFNLEMS----TDPPTSLASNEANIESRDKLDAGFNLESLVEA 1229
               S+E     +G   +   +E S      P T L +  +N   +   D   N+  + E 
Sbjct: 589  NGCSSESFDGKYGVSFSNNEVEKSGFEQRSPETHLLTPSSN---QTVFDVENNMNDISEQ 645

Query: 1230 S----VEMDKGSGRVTFISGIGTDIHSHRKLDEGLNLDIYTEKSNSEQNSLRSNPDSVIY 1397
            S    VE  + SG      G G+     R  D        T + N  QN +  +   +++
Sbjct: 646  SKPGGVEEYENSG---LTRGYGSS-DIGRDNDVATMTMSQTPEDNVYQNRVSDSSMPLVH 701

Query: 1398 NLHSLP 1415
             LHS P
Sbjct: 702  PLHSFP 707


>ref|XP_003593218.1| Methyl binding domain protein [Medicago truncatula]
           gi|355482266|gb|AES63469.1| Methyl binding domain
           protein [Medicago truncatula]
          Length = 805

 Score =  214 bits (544), Expect = 1e-52
 Identities = 110/207 (53%), Positives = 138/207 (66%), Gaps = 4/207 (1%)
 Frame = +3

Query: 3   KLLLSLKRKEGSVSLYCRRYISPTGQQFVSCKEVSSYLLPYFGFQDENHPNSLHSD---- 170
           KLLLSLKRK+G   +YCRRYISP GQQF+SCKEVSSYL   FG  D     +  S+    
Sbjct: 226 KLLLSLKRKDGRAWIYCRRYISPNGQQFLSCKEVSSYLQSLFGHADAQLQITQRSENILP 285

Query: 171 ESEYDACRLSSGSSAGLTHKDASTKEDLXXXXXXXXXXXXXDHEKQLILLETENLAEVEI 350
           E       +S+ ++A +  K+   ++ +             +  K++ LLE +NLA+V+I
Sbjct: 286 ELRVTTENVSNPAAASVARKEQDQRQIVATNSDASGLSVYNERFKEIALLEMDNLADVQI 345

Query: 351 KDLLECHICKMNFDEKDAYLQHLLSSHQKSAKRSRQSSTSVCDGVIIRDGKFECQFCHKI 530
           +DL ECH C M FDEKDAYLQHLLS HQK+ +R R  S SV DGVII+DGKFECQFCHK+
Sbjct: 346 RDLFECHKCSMTFDEKDAYLQHLLSIHQKTTRRYRLGS-SVSDGVIIKDGKFECQFCHKV 404

Query: 531 FDERRRYNGHVGVHVRNYVRSLEATPG 611
           F E+RRYN HVG+HVRNY+R  E  PG
Sbjct: 405 FLEKRRYNSHVGIHVRNYLRRAEDLPG 431


>ref|XP_002525855.1| hypothetical protein RCOM_0824380 [Ricinus communis]
            gi|223534860|gb|EEF36549.1| hypothetical protein
            RCOM_0824380 [Ricinus communis]
          Length = 697

 Score =  214 bits (544), Expect = 1e-52
 Identities = 149/410 (36%), Positives = 218/410 (53%), Gaps = 5/410 (1%)
 Frame = +3

Query: 3    KLLLSLKRKEGSVSLYCRRYISPTGQQFVSCKEVSSYLLPYFGFQDENHPNSLHSDESEY 182
            KLLL LKRKEG   +YCRRYISP+GQQF+SCKEVS+YL       D       HS+ +  
Sbjct: 248  KLLLGLKRKEGKAWVYCRRYISPSGQQFISCKEVSAYLQSCLKPYD-------HSNGNNR 300

Query: 183  DACRLSSGSSAGLTHKDASTKEDLXXXXXXXXXXXXXDHEKQLILLETENL--AEVEIKD 356
               R++S + AG + ++   ++               +HEK + LL  +NL  AEV+I+D
Sbjct: 301  QVHRVASENHAGTSGREEDQRQP-------------SEHEKAVSLLGIDNLELAEVQIQD 347

Query: 357  LLECHICKMNFDEKDAYLQHLLSSHQKSAKRSRQSSTSVCDGVIIRDGKFECQFCHKIFD 536
            L ECH C M FD+KD YLQHLLS HQ++ +R R  S SV DGVI++DGK+ECQFCHK+F 
Sbjct: 348  LFECHKCNMTFDDKDTYLQHLLSFHQRTTRRYRLGS-SVGDGVIVKDGKYECQFCHKVFH 406

Query: 537  ERRRYNGHVGVHVRNYVRSLEATPGDKTKRVKVNXXXXXXXXXXXXRVDPSVEMDMGSDL 716
            ERRRYNGHVG+HVRNYVR +E +P  +    K +                  E     +L
Sbjct: 407  ERRRYNGHVGIHVRNYVRGIEESPSTRMALQKRS------------------ESPTKDEL 448

Query: 717  PISLAGSKADIDSLGKLDEGSNWDMGSDPTFSAASNKAN-IGSRGKMDEESNQDMGSDPT 893
            P  ++   A I+        ++ D   +P+   +S+K N + ++  +   S+ ++ SD T
Sbjct: 449  PARISKMDALIEIAQNSIRETSSDRNGEPSGGFSSDKPNMVPNQELLASVSDHELNSDST 508

Query: 894  FSAASNKANIGSRGKMDEESNQDMGSDPPTSVTSEKANIDAR-SKLD-AGSNLDMGSDPP 1067
             S    + ++     +DE  +Q++G        ++   ID R  K+D AG  L++  D  
Sbjct: 509  LSEPDKEYDM-----IDE--SQELGLH---QQKTDDMIIDERIEKIDGAGDVLNVMVDSS 558

Query: 1068 ASNEVNVDSHGKMDAGFNLEMSTDPPTSLASNEANIESRDKLDAGFNLES 1217
            A      + HG     F     TD P  L   +  ++S  + ++GF L+S
Sbjct: 559  AE-----EQHGNTSEAFG---GTDCP--LVHTDEIVKSVIEQESGFELQS 598


>ref|XP_002300183.1| predicted protein [Populus trichocarpa] gi|222847441|gb|EEE84988.1|
           predicted protein [Populus trichocarpa]
          Length = 837

 Score =  212 bits (540), Expect = 4e-52
 Identities = 109/209 (52%), Positives = 142/209 (67%), Gaps = 4/209 (1%)
 Frame = +3

Query: 3   KLLLSLKRKEGSVSLYCRRYISPTGQQFVSCKEVSSYLL----PYFGFQDENHPNSLHSD 170
           KL+L LKRKEG   +YCRRY+SP+GQQF+SCK+VS+YL     PY   Q ++H    HS 
Sbjct: 268 KLILGLKRKEGRAWVYCRRYLSPSGQQFISCKDVSAYLQSLVGPYDAQQAKDHTG--HSI 325

Query: 171 ESEYDACRLSSGSSAGLTHKDASTKEDLXXXXXXXXXXXXXDHEKQLILLETENLAEVEI 350
           + ++          AG   +    ++ +             +H+KQ+ LLET+NLAEV+I
Sbjct: 326 QQDH-----GGAPHAGAIERLEDQRQSI-------------EHQKQVSLLETDNLAEVQI 367

Query: 351 KDLLECHICKMNFDEKDAYLQHLLSSHQKSAKRSRQSSTSVCDGVIIRDGKFECQFCHKI 530
           +DL ECH C+M FDEK  YL+HLLS HQ++ +R R  S SV DGVI++DGKFECQFCHK+
Sbjct: 368 RDLFECHKCRMTFDEKGTYLEHLLSFHQRTTRRYRLGS-SVGDGVIVKDGKFECQFCHKV 426

Query: 531 FDERRRYNGHVGVHVRNYVRSLEATPGDK 617
           F ERRRYNGHVG+HVRNYVR +E +PG K
Sbjct: 427 FHERRRYNGHVGIHVRNYVRGIEDSPGVK 455


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