BLASTX nr result

ID: Coptis24_contig00014077 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014077
         (1558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADN34260.1| N6-DNA-methyltransferase [Cucumis melo subsp. melo]    358   2e-96
ref|XP_002532710.1| n6-DNA-methyltransferase, putative [Ricinus ...   358   2e-96
ref|XP_004136904.1| PREDICTED: hemK methyltransferase family mem...   355   2e-95
gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Me...   330   6e-88
ref|XP_003605160.1| Pentatricopeptide repeat-containing protein ...   330   6e-88

>gb|ADN34260.1| N6-DNA-methyltransferase [Cucumis melo subsp. melo]
          Length = 256

 Score =  358 bits (919), Expect = 2e-96
 Identities = 176/250 (70%), Positives = 206/250 (82%)
 Frame = -3

Query: 1256 RIAQIKLVSGHPEVYEPCDDSFALVDALLADRINLLEHRPTVCMEVGCGSGYVITSLAIM 1077
            R AQI LVS H EVYEPCDDSFALVDALLADR+ LL H PT+C+E GCGSGYVITSLA++
Sbjct: 5    RTAQIHLVSSHREVYEPCDDSFALVDALLADRVKLLNHNPTLCLEFGCGSGYVITSLALI 64

Query: 1076 LGQEGDGHHYFATDINPHAVRVTHETLKAHGVHAEVICDNVASGLERRLEGMVDVMVVNP 897
            LG+E    HY ATDINPHA+RVT ETL+AHG+HAE++C ++ASGLE+RL G VDV+VVNP
Sbjct: 65   LGKEASATHYIATDINPHAIRVTQETLEAHGLHAELVCTDLASGLEKRLAGSVDVLVVNP 124

Query: 896  PYVPTPEDEVXXXXXXXXXXXGENGRTVIDKILPIADKLLSERGWLYIVTLTANNPFQIC 717
            PYVPTPEDEV           GENGR+VID+ILP+AD LLS++GWLY+VTLTANNPFQIC
Sbjct: 125  PYVPTPEDEVGQDGIASAWAGGENGRSVIDRILPVADVLLSDKGWLYMVTLTANNPFQIC 184

Query: 716  GIMRDKGYASRIVVQRSTEEESLHVIKFWRDAVVQGEGKEPTSTNKAPSASVMNSLLSQL 537
              MR+KGYASRIVVQRSTEEESLHVIKFW+DA +Q +GK+  ST+K     V+ SL+SQL
Sbjct: 185  LQMREKGYASRIVVQRSTEEESLHVIKFWKDADLQVDGKD--STHKTGPGRVVESLISQL 242

Query: 536  PRLPFWNSGS 507
            PRL FW + S
Sbjct: 243  PRLSFWRNNS 252


>ref|XP_002532710.1| n6-DNA-methyltransferase, putative [Ricinus communis]
            gi|223527556|gb|EEF29677.1| n6-DNA-methyltransferase,
            putative [Ricinus communis]
          Length = 256

 Score =  358 bits (919), Expect = 2e-96
 Identities = 179/251 (71%), Positives = 206/251 (82%)
 Frame = -3

Query: 1259 SRIAQIKLVSGHPEVYEPCDDSFALVDALLADRINLLEHRPTVCMEVGCGSGYVITSLAI 1080
            SRIAQI+LVS HPEVYEPCDDSFALVDALLADRINLL+H P VC EVGCGSGYVITSLA+
Sbjct: 3    SRIAQIRLVSSHPEVYEPCDDSFALVDALLADRINLLDHNPKVCFEVGCGSGYVITSLAL 62

Query: 1079 MLGQEGDGHHYFATDINPHAVRVTHETLKAHGVHAEVICDNVASGLERRLEGMVDVMVVN 900
            ML Q+  G +Y ATD+NPHAVRVT ETL+AHGVHAE+I  ++ASGLE+RL+GMVDVMVVN
Sbjct: 63   MLRQQIPGVYYIATDLNPHAVRVTRETLEAHGVHAELISTDIASGLEKRLQGMVDVMVVN 122

Query: 899  PPYVPTPEDEVXXXXXXXXXXXGENGRTVIDKILPIADKLLSERGWLYIVTLTANNPFQI 720
            PPYVPTPEDEV           GENGR VID+IL +AD LLSE+GWLY+VT+T N+P Q+
Sbjct: 123  PPYVPTPEDEVGCEGIASAWAGGENGRKVIDRILHVADCLLSEKGWLYMVTITCNDPSQL 182

Query: 719  CGIMRDKGYASRIVVQRSTEEESLHVIKFWRDAVVQGEGKEPTSTNKAPSASVMNSLLSQ 540
            C  MR KGYASRIVVQRSTEEESLH+IKFWRD+  Q + K+  +TNK     VM SL+SQ
Sbjct: 183  CLKMRKKGYASRIVVQRSTEEESLHIIKFWRDSDTQFDTKKTLTTNKTIPERVMESLVSQ 242

Query: 539  LPRLPFWNSGS 507
            LP+L FW +GS
Sbjct: 243  LPQLSFWRNGS 253


>ref|XP_004136904.1| PREDICTED: hemK methyltransferase family member 2-like [Cucumis
            sativus] gi|449529866|ref|XP_004171919.1| PREDICTED: hemK
            methyltransferase family member 2-like [Cucumis sativus]
          Length = 256

 Score =  355 bits (910), Expect = 2e-95
 Identities = 174/250 (69%), Positives = 205/250 (82%)
 Frame = -3

Query: 1256 RIAQIKLVSGHPEVYEPCDDSFALVDALLADRINLLEHRPTVCMEVGCGSGYVITSLAIM 1077
            R AQI LVS H EVYEPCDDSFALVDALLAD++ LL H PT+C+E GCGSGYVITSLA++
Sbjct: 5    RTAQIPLVSSHREVYEPCDDSFALVDALLADQVKLLNHHPTLCLEFGCGSGYVITSLALI 64

Query: 1076 LGQEGDGHHYFATDINPHAVRVTHETLKAHGVHAEVICDNVASGLERRLEGMVDVMVVNP 897
            LG+E    HY ATDINPHA+RVT ETL+AHG+HAE++C ++ASGLE+RL G VDV+VVNP
Sbjct: 65   LGKEASATHYIATDINPHAIRVTQETLEAHGLHAELVCTDIASGLEKRLAGSVDVLVVNP 124

Query: 896  PYVPTPEDEVXXXXXXXXXXXGENGRTVIDKILPIADKLLSERGWLYIVTLTANNPFQIC 717
            PYVPTPEDEV           GENGR+VID+ILP+AD LLS++GWLY+VTLTANNP QIC
Sbjct: 125  PYVPTPEDEVGQDGIASAWAGGENGRSVIDRILPVADVLLSDKGWLYMVTLTANNPAQIC 184

Query: 716  GIMRDKGYASRIVVQRSTEEESLHVIKFWRDAVVQGEGKEPTSTNKAPSASVMNSLLSQL 537
              MR+KGYASRIVVQRSTEEESLHVIKFW+DA +Q +GK+  ST+K     V+ SL+SQL
Sbjct: 185  LQMREKGYASRIVVQRSTEEESLHVIKFWKDADLQVDGKD--STHKTGPGKVVESLISQL 242

Query: 536  PRLPFWNSGS 507
            PRL FW + S
Sbjct: 243  PRLSFWRNNS 252


>gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
            small; Tetratricopeptide-like helical [Medicago
            truncatula]
          Length = 971

 Score =  330 bits (846), Expect = 6e-88
 Identities = 167/249 (67%), Positives = 194/249 (77%)
 Frame = -3

Query: 1268 KVLSRIAQIKLVSGHPEVYEPCDDSFALVDALLADRINLLEHRPTVCMEVGCGSGYVITS 1089
            K LS+ AQI+LVS H EVYEPCDDSFALVDALLADR NLLEH P +CME+GCGSGYVITS
Sbjct: 719  KDLSKTAQIRLVSSHNEVYEPCDDSFALVDALLADRTNLLEHHPALCMEIGCGSGYVITS 778

Query: 1088 LAIMLGQEGDGHHYFATDINPHAVRVTHETLKAHGVHAEVICDNVASGLERRLEGMVDVM 909
            LA++LGQEG G +Y ATDINPHAV+VT ET++AHGV AE+I  ++ASGLE RL GM+DVM
Sbjct: 779  LALILGQEGSGVNYIATDINPHAVKVTRETIEAHGVDAELIITDIASGLENRLAGMIDVM 838

Query: 908  VVNPPYVPTPEDEVXXXXXXXXXXXGENGRTVIDKILPIADKLLSERGWLYIVTLTANNP 729
            VVNPPYVPTPE EV           GENGR+VID+ILP+AD LLSE+GWLY+VTLTANNP
Sbjct: 839  VVNPPYVPTPEAEVGSEGITASWAGGENGRSVIDRILPVADALLSEKGWLYMVTLTANNP 898

Query: 728  FQICGIMRDKGYASRIVVQRSTEEESLHVIKFWRDAVVQGEGKEPTSTNKAPSASVMNSL 549
             +IC  MR KGY S+IVVQRSTEEESLH+IKFWRD             N   ++  M SL
Sbjct: 899  SEICLEMRKKGYTSKIVVQRSTEEESLHIIKFWRDL------DNGLDENGQSTSGFMGSL 952

Query: 548  LSQLPRLPF 522
            LSQ+P + +
Sbjct: 953  LSQVPLISY 961


>ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355506215|gb|AES87357.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1026

 Score =  330 bits (846), Expect = 6e-88
 Identities = 167/249 (67%), Positives = 194/249 (77%)
 Frame = -3

Query: 1268 KVLSRIAQIKLVSGHPEVYEPCDDSFALVDALLADRINLLEHRPTVCMEVGCGSGYVITS 1089
            K LS+ AQI+LVS H EVYEPCDDSFALVDALLADR NLLEH P +CME+GCGSGYVITS
Sbjct: 774  KDLSKTAQIRLVSSHNEVYEPCDDSFALVDALLADRTNLLEHHPALCMEIGCGSGYVITS 833

Query: 1088 LAIMLGQEGDGHHYFATDINPHAVRVTHETLKAHGVHAEVICDNVASGLERRLEGMVDVM 909
            LA++LGQEG G +Y ATDINPHAV+VT ET++AHGV AE+I  ++ASGLE RL GM+DVM
Sbjct: 834  LALILGQEGSGVNYIATDINPHAVKVTRETIEAHGVDAELIITDIASGLENRLAGMIDVM 893

Query: 908  VVNPPYVPTPEDEVXXXXXXXXXXXGENGRTVIDKILPIADKLLSERGWLYIVTLTANNP 729
            VVNPPYVPTPE EV           GENGR+VID+ILP+AD LLSE+GWLY+VTLTANNP
Sbjct: 894  VVNPPYVPTPEAEVGSEGITASWAGGENGRSVIDRILPVADALLSEKGWLYMVTLTANNP 953

Query: 728  FQICGIMRDKGYASRIVVQRSTEEESLHVIKFWRDAVVQGEGKEPTSTNKAPSASVMNSL 549
             +IC  MR KGY S+IVVQRSTEEESLH+IKFWRD             N   ++  M SL
Sbjct: 954  SEICLEMRKKGYTSKIVVQRSTEEESLHIIKFWRDL------DNGLDENGQSTSGFMGSL 1007

Query: 548  LSQLPRLPF 522
            LSQ+P + +
Sbjct: 1008 LSQVPLISY 1016


Top