BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014075
         (795 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC63273.1| SKP1-like protein [Nicotiana clevelandii]              203   3e-50
gb|AFM75900.1| GSK1 [Gossypium hirsutum] gi|399912953|gb|AFP5536...   203   3e-50
gb|AAO85510.1| SKP1 [Nicotiana benthamiana]                           202   5e-50
ref|XP_002531150.1| skp1, putative [Ricinus communis] gi|2235292...   202   7e-50
ref|XP_002510576.1| skp1, putative [Ricinus communis] gi|2235512...   200   3e-49

>gb|AAC63273.1| SKP1-like protein [Nicotiana clevelandii]
          Length = 153

 Score =  203 bits (517), Expect = 3e-50
 Identities = 101/152 (66%), Positives = 121/152 (79%)
 Frame = -1

Query: 648 KMITLTSSDGEKFEIEETVAMESITIKNIIDDGAIDTGIPLPNVMAPVLSKVIEYCKHHV 469
           KMI L SSDGE FE+EE+VA+ES TIK++I+D   DT IPLPNV + +L+KVIEYCK HV
Sbjct: 2   KMIVLRSSDGETFEVEESVALESQTIKHMIEDDCADTSIPLPNVTSKILAKVIEYCKRHV 61

Query: 468 DNPSKIEDREVDDELKKWDKEFVQVDQNMLFDLILAANYLNIKGLLDLTCSTVADMMKGK 289
           D  SK ED+ V+D+LK +D +FV+VDQ+ LFDLILAANYLNIK LLDLTC TVADM+KGK
Sbjct: 62  DAASKTEDKAVEDDLKAFDADFVKVDQSTLFDLILAANYLNIKSLLDLTCQTVADMIKGK 121

Query: 288 TPEEIRNTFHIVNDYTAXXXXXXXXENSWAFE 193
           TPEEIR TF+I ND+T         EN+WAFE
Sbjct: 122 TPEEIRKTFNIKNDFTPEEEEEVRRENAWAFE 153


>gb|AFM75900.1| GSK1 [Gossypium hirsutum] gi|399912953|gb|AFP55363.1| SKP1-like
           protein [Gossypium hirsutum]
          Length = 156

 Score =  203 bits (517), Expect = 3e-50
 Identities = 101/156 (64%), Positives = 120/156 (76%)
 Frame = -1

Query: 660 TETAKMITLTSSDGEKFEIEETVAMESITIKNIIDDGAIDTGIPLPNVMAPVLSKVIEYC 481
           + + + ITL SSDGE FE++E VA+ES TIK++I+D   D GIPLPNV + +L+KVIEYC
Sbjct: 2   SSSGRKITLKSSDGESFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILAKVIEYC 61

Query: 480 KHHVDNPSKIEDREVDDELKKWDKEFVQVDQNMLFDLILAANYLNIKGLLDLTCSTVADM 301
           K HV+ P K +DR  DDELK WD +FV+VDQ  LFDLILAANYLNIKGLLDLTC TVADM
Sbjct: 62  KKHVEAP-KTDDRSADDELKSWDADFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADM 120

Query: 300 MKGKTPEEIRNTFHIVNDYTAXXXXXXXXENSWAFE 193
           +KGKTPEEIR TF+I ND+T         EN WAFE
Sbjct: 121 IKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156


>gb|AAO85510.1| SKP1 [Nicotiana benthamiana]
          Length = 153

 Score =  202 bits (515), Expect = 5e-50
 Identities = 101/152 (66%), Positives = 121/152 (79%)
 Frame = -1

Query: 648 KMITLTSSDGEKFEIEETVAMESITIKNIIDDGAIDTGIPLPNVMAPVLSKVIEYCKHHV 469
           KMI L SSDGE FE+EE+VA+ES TIK++I+D   DT IPLPNV + +L+KVIEYCK HV
Sbjct: 2   KMIVLRSSDGETFEVEESVALESQTIKHMIEDDCADTSIPLPNVTSKILAKVIEYCKRHV 61

Query: 468 DNPSKIEDREVDDELKKWDKEFVQVDQNMLFDLILAANYLNIKGLLDLTCSTVADMMKGK 289
           D  SK ED+ V+D+LK +D +FV+VDQ+ LFDLILAANYLNIK LLDLTC TVADM+KGK
Sbjct: 62  DAASKTEDKAVEDDLKAFDADFVKVDQSTLFDLILAANYLNIKRLLDLTCQTVADMIKGK 121

Query: 288 TPEEIRNTFHIVNDYTAXXXXXXXXENSWAFE 193
           TPEEIR TF+I ND+T         EN+WAFE
Sbjct: 122 TPEEIRKTFNIKNDFTPEEEEEVRRENAWAFE 153


>ref|XP_002531150.1| skp1, putative [Ricinus communis] gi|223529263|gb|EEF31235.1| skp1,
           putative [Ricinus communis]
          Length = 161

 Score =  202 bits (514), Expect = 7e-50
 Identities = 104/160 (65%), Positives = 123/160 (76%), Gaps = 6/160 (3%)
 Frame = -1

Query: 654 TAKMITLTSSDGEKFEIEETVAMESITIKNIIDDGAIDTGIPLPNVMAPVLSKVIEYCKH 475
           ++K ITL SSDGE FE++E VA+ES TIK++I+D   D+GIPLPNV + +L+KVIEYCK 
Sbjct: 2   SSKKITLKSSDGEPFEVDEVVALESQTIKHMIEDDCADSGIPLPNVTSKILAKVIEYCKK 61

Query: 474 HVDNP-SKIEDREV-----DDELKKWDKEFVQVDQNMLFDLILAANYLNIKGLLDLTCST 313
           HV+ P S  EDR +     DDELK WD EFV+VDQ+ LFDLILAANYLNIKGLLDLTC T
Sbjct: 62  HVETPKSSSEDRTINNSNTDDELKAWDAEFVKVDQSTLFDLILAANYLNIKGLLDLTCQT 121

Query: 312 VADMMKGKTPEEIRNTFHIVNDYTAXXXXXXXXENSWAFE 193
           VADM+KGKTPEEIR TF+I ND+T         EN WAFE
Sbjct: 122 VADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 161


>ref|XP_002510576.1| skp1, putative [Ricinus communis] gi|223551277|gb|EEF52763.1| skp1,
           putative [Ricinus communis]
          Length = 157

 Score =  200 bits (508), Expect = 3e-49
 Identities = 104/156 (66%), Positives = 120/156 (76%), Gaps = 2/156 (1%)
 Frame = -1

Query: 654 TAKMITLTSSDGEKFEIEETVAMESITIKNIIDDGAIDTGIPLPNVMAPVLSKVIEYCKH 475
           T++ ITL SSDGE FE++E VA+ES TIK++I+D   D GIPLPNV + +LSKVIEYCK 
Sbjct: 3   TSRKITLKSSDGETFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKK 62

Query: 474 HVDNPSKIEDR--EVDDELKKWDKEFVQVDQNMLFDLILAANYLNIKGLLDLTCSTVADM 301
           HV+  SK +DR   VDDELK WD EFV+VDQ  LFDLILAANYLNIK LLDLTC TVADM
Sbjct: 63  HVET-SKSDDRPSSVDDELKTWDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADM 121

Query: 300 MKGKTPEEIRNTFHIVNDYTAXXXXXXXXENSWAFE 193
           +KGKTPEEIR TF+I ND+T         EN WAFE
Sbjct: 122 IKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157