BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014073
         (630 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280960.2| PREDICTED: DNA topoisomerase 1-like [Vitis v...    98   1e-18
dbj|BAD69127.1| putative DNA topoisomerase I [Oryza sativa Japon...    95   1e-17
gb|EEC80401.1| hypothetical protein OsI_22539 [Oryza sativa Indi...    95   1e-17
gb|EAZ36631.1| hypothetical protein OsJ_20977 [Oryza sativa Japo...    95   1e-17
ref|XP_002334451.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17

>ref|XP_002280960.2| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera]
          Length = 1185

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 66/155 (42%), Positives = 87/155 (56%), Gaps = 6/155 (3%)
 Frame = -3

Query: 448 KPNLTKLATPTGDAKVNGSKQAFNSEKASVTKIAAQSVQASEILPAGDK----VDKSNLT 281
           K  +T     +  A+   +K +  + K+++TK  +QS QAS+    G+K    +D S  T
Sbjct: 269 KEQVTSTDASSDVAQKKSTKSSSEANKSNITK-KSQSPQASKNNSTGNKPVEALDSSVST 327

Query: 280 PGNSKKTVEXXXXXXXXXXXXXVHMKPDKAPAV--LVEVKKRPLEKGLRSLYPPTGKSVV 107
              SKK                   K      +  +  +++RPL+K    LYP +GKSVV
Sbjct: 328 KSQSKKATGSSNKKGKSPKVANESPKKQTVHTMGKIKSLEQRPLKK----LYPSSGKSVV 383

Query: 106 VVESLTKAKVIQKYLGDMYEVLPSYGHVRDLAGRS 2
           VVES+TKAKVIQ YLGDMYEVLPSYGHVRDLAGRS
Sbjct: 384 VVESVTKAKVIQGYLGDMYEVLPSYGHVRDLAGRS 418


>dbj|BAD69127.1| putative DNA topoisomerase I [Oryza sativa Japonica Group]
           gi|55297350|dbj|BAD69191.1| putative DNA topoisomerase I
           [Oryza sativa Japonica Group]
          Length = 896

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 71/181 (39%), Positives = 92/181 (50%), Gaps = 13/181 (7%)
 Frame = -3

Query: 505 SCTTVPSGDDKISGSKQAKKPNLTKLATPTGDAKVNGSKQA---FNSEKASVTKIAAQSV 335
           +C T+ + +   S SK++K    TK  T    +  +  K+A      EKAS TK   +SV
Sbjct: 156 ACGTI-TDEASTSTSKRSKSGTGTKKTTTRRKSPTSRKKEASEDMKEEKAS-TKKQRKSV 213

Query: 334 QASEILPAGDKV----DKSNLTPGNSKKTVEXXXXXXXXXXXXXVHMKPDKAP------A 185
           + S       K+    ++S      SKK  +                  + A       A
Sbjct: 214 KTSTAATKSRKIGVNQEESKSDISKSKKAADSSKEKKTSSRSKKSSKAKESAASNATAKA 273

Query: 184 VLVEVKKRPLEKGLRSLYPPTGKSVVVVESLTKAKVIQKYLGDMYEVLPSYGHVRDLAGR 5
            +  +     +K L  LYPPT KSV+VVES+TKAKVIQKYLGDMYEVLPSYGHVRDLAGR
Sbjct: 274 EICTMTSVSEQKPLVPLYPPTAKSVLVVESVTKAKVIQKYLGDMYEVLPSYGHVRDLAGR 333

Query: 4   S 2
           S
Sbjct: 334 S 334


>gb|EEC80401.1| hypothetical protein OsI_22539 [Oryza sativa Indica Group]
          Length = 888

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 71/181 (39%), Positives = 92/181 (50%), Gaps = 13/181 (7%)
 Frame = -3

Query: 505 SCTTVPSGDDKISGSKQAKKPNLTKLATPTGDAKVNGSKQA---FNSEKASVTKIAAQSV 335
           +C T+ + +   S SK++K    TK  T    +  +  K+A      EKAS TK   +SV
Sbjct: 156 ACGTI-TDEASTSTSKRSKSGTGTKKTTTRRKSPTSRKKEASEDMKEEKAS-TKKQRKSV 213

Query: 334 QASEILPAGDKV----DKSNLTPGNSKKTVEXXXXXXXXXXXXXVHMKPDKAP------A 185
           + S       K+    ++S      SKK  +                  + A       A
Sbjct: 214 KTSTAATKSRKIGVNQEESKSDISKSKKAADSSKEKKTSSRSKKSSKAKESAASNATAKA 273

Query: 184 VLVEVKKRPLEKGLRSLYPPTGKSVVVVESLTKAKVIQKYLGDMYEVLPSYGHVRDLAGR 5
            +  +     +K L  LYPPT KSV+VVES+TKAKVIQKYLGDMYEVLPSYGHVRDLAGR
Sbjct: 274 EICTMTSVSEQKPLVPLYPPTAKSVLVVESVTKAKVIQKYLGDMYEVLPSYGHVRDLAGR 333

Query: 4   S 2
           S
Sbjct: 334 S 334


>gb|EAZ36631.1| hypothetical protein OsJ_20977 [Oryza sativa Japonica Group]
          Length = 1180

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 71/181 (39%), Positives = 92/181 (50%), Gaps = 13/181 (7%)
 Frame = -3

Query: 505 SCTTVPSGDDKISGSKQAKKPNLTKLATPTGDAKVNGSKQA---FNSEKASVTKIAAQSV 335
           +C T+ + +   S SK++K    TK  T    +  +  K+A      EKAS TK   +SV
Sbjct: 156 ACGTI-TDEASTSTSKRSKSGTGTKKTTTRRKSPTSRKKEASEDMKEEKAS-TKKQRKSV 213

Query: 334 QASEILPAGDKV----DKSNLTPGNSKKTVEXXXXXXXXXXXXXVHMKPDKAP------A 185
           + S       K+    ++S      SKK  +                  + A       A
Sbjct: 214 KTSTAATKSRKIGVNQEESKSDISKSKKAADSSKEKKTSSRSKKSSKAKESAASNATAKA 273

Query: 184 VLVEVKKRPLEKGLRSLYPPTGKSVVVVESLTKAKVIQKYLGDMYEVLPSYGHVRDLAGR 5
            +  +     +K L  LYPPT KSV+VVES+TKAKVIQKYLGDMYEVLPSYGHVRDLAGR
Sbjct: 274 EICTMTSVSEQKPLVPLYPPTAKSVLVVESVTKAKVIQKYLGDMYEVLPSYGHVRDLAGR 333

Query: 4   S 2
           S
Sbjct: 334 S 334


>ref|XP_002334451.1| predicted protein [Populus trichocarpa] gi|222872210|gb|EEF09341.1|
           predicted protein [Populus trichocarpa]
          Length = 780

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 71/168 (42%), Positives = 92/168 (54%), Gaps = 8/168 (4%)
 Frame = -3

Query: 481 DDKISGSKQAK-KPNLTKLATPTGDAK----VNGSKQAFNSEKASVTKIAAQSVQASEIL 317
           + K S SK+ K + + T ++     AK     +  K++  S+   V   A+Q  +A+E +
Sbjct: 202 EKKESKSKKNKGEASFTAVSEKAAGAKSMTTTSQLKKSLPSKSGQVAARASQK-KATEEM 260

Query: 316 PAGDKVDKSNLTPGNS--KKTVEXXXXXXXXXXXXXVHMKPDKAPAVLVEVKKRPLEKG- 146
           P G    +SN   GNS  K+T +                KP K        K +P  +G 
Sbjct: 261 PNGSTKQQSNKKNGNSSIKRTTKKAVNGSAEK------QKPQKIG------KLQPFAQGK 308

Query: 145 LRSLYPPTGKSVVVVESLTKAKVIQKYLGDMYEVLPSYGHVRDLAGRS 2
           L+SLYP  GK VVVVES+TKAKVIQ YLGDMYEVLPSYGHVRDLA RS
Sbjct: 309 LKSLYPSAGKCVVVVESVTKAKVIQGYLGDMYEVLPSYGHVRDLAARS 356