BLASTX nr result

ID: Coptis24_contig00014064 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014064
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325256.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002309005.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|XP_002519404.1| conserved hypothetical protein [Ricinus comm...    68   9e-10
ref|XP_002263442.2| PREDICTED: uncharacterized protein LOC100247...    66   3e-09
emb|CBI17905.3| unnamed protein product [Vitis vinifera]               66   3e-09

>ref|XP_002325256.1| predicted protein [Populus trichocarpa] gi|222866690|gb|EEF03821.1|
           predicted protein [Populus trichocarpa]
          Length = 899

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 47/96 (48%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
 Frame = -1

Query: 278 RPDRSTDFVLKFGNQQARSNGFGFGNGTSKDHLNGLTLDSLLNKENRDENITLALGTSLF 99
           +P+ S+  V KF  QQ+    F F NGT K+      LDSL N E ++  ITLALG SLF
Sbjct: 468 KPNYSSSCVPKFRRQQSCHVEFNFVNGTQKNEPGEPNLDSLKNTEGKEVKITLALGNSLF 527

Query: 98  P-----EKTDSRVLSKQLQENVPWQSEATPSIIEAL 6
                 EK  S  L K L+ENVPWQSE  PSI++AL
Sbjct: 528 SDIGKLEKGRSGHLCKLLKENVPWQSETIPSIVDAL 563


>ref|XP_002309005.1| predicted protein [Populus trichocarpa] gi|222854981|gb|EEE92528.1|
           predicted protein [Populus trichocarpa]
          Length = 896

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 45/96 (46%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
 Frame = -1

Query: 278 RPDRSTDFVLKFGNQQARSNGFGFGNGTSKDHLNGLTLDSLLNKENRDENITLALGTSLF 99
           +P+ S+  V KF  QQ+    F F NG  K+      LDSL N E ++  ITLALG SLF
Sbjct: 465 KPNYSSSNVPKFRRQQSCHIEFNFVNGFQKNEPEEPNLDSLKNSEGKEVKITLALGNSLF 524

Query: 98  P-----EKTDSRVLSKQLQENVPWQSEATPSIIEAL 6
                 EK  S  L K L+ENVPWQSE  PSI++A+
Sbjct: 525 SDIGKLEKGRSDHLCKLLKENVPWQSEIIPSIVDAM 560


>ref|XP_002519404.1| conserved hypothetical protein [Ricinus communis]
           gi|223541471|gb|EEF43021.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1008

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 43/95 (45%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
 Frame = -1

Query: 278 RPDRSTDFVLKFGNQQARSNGFGFGNGTSKDHLNGLTLDSLLNKENRDENITLALGTSLF 99
           +PD ++ FV KF  QQ+    F FG+ T K   N   LDSL N + ++  ITLALG S F
Sbjct: 560 KPDFTSSFVPKFRRQQSCKIDFKFGDVTQKQQPN---LDSLKNTQGKEVKITLALGNSFF 616

Query: 98  PEKTDSRV----LSKQLQENVPWQSEATPSIIEAL 6
               +S      L + LQ+NVPWQSE   SI EAL
Sbjct: 617 SATGESAKGKNDLCRLLQDNVPWQSEIIHSIAEAL 651


>ref|XP_002263442.2| PREDICTED: uncharacterized protein LOC100247938 [Vitis vinifera]
          Length = 1045

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 43/102 (42%), Positives = 55/102 (53%), Gaps = 11/102 (10%)
 Frame = -1

Query: 278 RPDRSTDFVLKFGNQQARSNGFGFGNGTSKDHLNGLTLDSLLNKENRDENITLALGTSLF 99
           +P+ ++  V +F  QQ+    F FGNG  K      +LD L   E +D  ITLALGTS++
Sbjct: 583 KPNHASSLVPRFRRQQSCHIEFSFGNGMHKQQSVEPSLDCLKKTEGKDVKITLALGTSVY 642

Query: 98  P----------EKT-DSRVLSKQLQENVPWQSEATPSIIEAL 6
                      EKT   R + K L+ENVPWQSEA   I EAL
Sbjct: 643 SDSGKLPELKGEKTIRLRDICKLLEENVPWQSEAISPIAEAL 684


>emb|CBI17905.3| unnamed protein product [Vitis vinifera]
          Length = 974

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 43/102 (42%), Positives = 55/102 (53%), Gaps = 11/102 (10%)
 Frame = -1

Query: 278 RPDRSTDFVLKFGNQQARSNGFGFGNGTSKDHLNGLTLDSLLNKENRDENITLALGTSLF 99
           +P+ ++  V +F  QQ+    F FGNG  K      +LD L   E +D  ITLALGTS++
Sbjct: 530 KPNHASSLVPRFRRQQSCHIEFSFGNGMHKQQSVEPSLDCLKKTEGKDVKITLALGTSVY 589

Query: 98  P----------EKT-DSRVLSKQLQENVPWQSEATPSIIEAL 6
                      EKT   R + K L+ENVPWQSEA   I EAL
Sbjct: 590 SDSGKLPELKGEKTIRLRDICKLLEENVPWQSEAISPIAEAL 631


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