BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014050
         (1290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277265.1| PREDICTED: uncharacterized protein LOC100266...   446   e-123
ref|XP_002518979.1| ATP binding protein, putative [Ricinus commu...   437   e-120
ref|NP_565805.1| shikimate kinase like 2 [Arabidopsis thaliana] ...   432   e-119
ref|XP_002303438.1| shikimate kinase-like protein [Populus trich...   430   e-118
ref|XP_004150663.1| PREDICTED: uncharacterized protein LOC101203...   427   e-117

>ref|XP_002277265.1| PREDICTED: uncharacterized protein LOC100266016 [Vitis vinifera]
            gi|297742063|emb|CBI33850.3| unnamed protein product
            [Vitis vinifera]
          Length = 371

 Score =  446 bits (1147), Expect = e-123
 Identities = 221/326 (67%), Positives = 266/326 (81%), Gaps = 3/326 (0%)
 Frame = -2

Query: 1178 NSNKRMTGQS---VSLNTRNYEFSDGVSEVELKIHLRDGQVKSCRDVFVNAEEGATSLTV 1008
            N+ +R++ ++   +S+N  NYEFSD  SE+EL++ L  G   S RD+FV+AE+ +  + V
Sbjct: 44   NATRRLSCKALSTISVNPSNYEFSDASSEMELRLQLGGGGTLSSRDIFVDAEDSSLKIGV 103

Query: 1007 KVKSPYGPLVTLLETNHLYDKIKPAETIWYIDEDQLVINLKKHDADLKWPDIVESWESLT 828
            K     G  +TL+E N LY+KIK +ETIWYIDEDQLV+NLKK D DLKWPDIVESWESLT
Sbjct: 104  KQS---GSFITLVEINKLYEKIKSSETIWYIDEDQLVVNLKKQDPDLKWPDIVESWESLT 160

Query: 827  IGAVRLLKGSSLYIVGESNELNQIVARELAVGLGYTPLNTSELLEAFTKQTIDSWVIAEG 648
             GA++LLKG+S+YIVG+S E+N  VARELAVGLGYTPLNT ELLE F KQ+IDSWV A+G
Sbjct: 161  AGAMQLLKGTSIYIVGDSTEINDKVARELAVGLGYTPLNTKELLETFAKQSIDSWVTADG 220

Query: 647  MDSVAKAEGAILESLSSHVRAVIATLGGEHGAAFDANKWQHLYSGFTIWLSPSETTDDIR 468
             +SVA+AE A+LE+LSSHVRAVIATLGG HGAA  A+KW+HLY+GFT+WLS SE+ D+  
Sbjct: 221  SESVAEAESAVLENLSSHVRAVIATLGGLHGAARRADKWRHLYAGFTVWLSQSESIDEES 280

Query: 467  AKEEARRQIENGSGAYSNADVVVKMRGWDHHHAQTVAQACLSALKKLILSDKTLPGKKSL 288
            AKEEARR I+ GS  YSNADVVVK+ GWD  HA+TVAQA LSALK+LI+SDK LPGKKSL
Sbjct: 281  AKEEARRHIQEGSLGYSNADVVVKLHGWDADHAKTVAQASLSALKQLIMSDKKLPGKKSL 340

Query: 287  YIRLGCRGDWPNIKPPGWDPSAGASV 210
            YIRLGCRGDWP+IKPPGWDPS GA V
Sbjct: 341  YIRLGCRGDWPDIKPPGWDPSTGAEV 366


>ref|XP_002518979.1| ATP binding protein, putative [Ricinus communis]
            gi|223541966|gb|EEF43512.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 382

 Score =  437 bits (1124), Expect = e-120
 Identities = 227/357 (63%), Positives = 277/357 (77%), Gaps = 3/357 (0%)
 Frame = -2

Query: 1283 IQKMMAAGTSSFSFLPQLKKHFNFNLN---NRFPCSKFNSNKRMTGQSVSLNTRNYEFSD 1113
            I K +    S F       K +N + +   NR  CS F         S +  + NYEFSD
Sbjct: 32   ISKPVFTSISKFCLPISSFKSYNVSASKEYNRLSCSCF---------STATTSTNYEFSD 82

Query: 1112 GVSEVELKIHLRDGQVKSCRDVFVNAEEGATSLTVKVKSPYGPLVTLLETNHLYDKIKPA 933
            G SEVEL++ L     +S +D+FV+A+   TSL V+VK   G   TL++TN+L+DKIKPA
Sbjct: 83   GSSEVELRLPLGSQDYESGKDIFVDAD--GTSLIVRVKRS-GSFTTLIQTNYLFDKIKPA 139

Query: 932  ETIWYIDEDQLVINLKKHDADLKWPDIVESWESLTIGAVRLLKGSSLYIVGESNELNQIV 753
            ETIWYID+DQLVINLKK D +LKWPDIVESWESLT GA++LLKG+S+YIVG+S E+NQ V
Sbjct: 140  ETIWYIDDDQLVINLKKQDPELKWPDIVESWESLTAGAMQLLKGTSIYIVGDSTEINQKV 199

Query: 752  ARELAVGLGYTPLNTSELLEAFTKQTIDSWVIAEGMDSVAKAEGAILESLSSHVRAVIAT 573
            ARELA GLGYTPL+T ELLE +TKQTIDSWV+AEG DSVA+AE AILESLSSHVRAVI+T
Sbjct: 200  ARELAGGLGYTPLDTQELLETYTKQTIDSWVLAEGSDSVAEAESAILESLSSHVRAVIST 259

Query: 572  LGGEHGAAFDANKWQHLYSGFTIWLSPSETTDDIRAKEEARRQIENGSGAYSNADVVVKM 393
            LG + GAA  +++W+HLY+GFT+WLS +E TD+  AKEEARR +++GS AYS ADVVVK+
Sbjct: 260  LGRKKGAAGRSDRWRHLYAGFTVWLSQTEATDEGSAKEEARRHVQDGSLAYSKADVVVKV 319

Query: 392  RGWDHHHAQTVAQACLSALKKLILSDKTLPGKKSLYIRLGCRGDWPNIKPPGWDPSA 222
            +GW+  HA++VAQA LSALK+LIL DK LPGKKSLYIRLGCRGDWPNIKPPGW+PSA
Sbjct: 320  QGWNDDHAKSVAQASLSALKQLILPDKKLPGKKSLYIRLGCRGDWPNIKPPGWNPSA 376


>ref|NP_565805.1| shikimate kinase like 2 [Arabidopsis thaliana]
            gi|75100603|sp|O82290.2|SKL2_ARATH RecName: Full=Probable
            inactive shikimate kinase like 2, chloroplastic;
            Short=AtSKL2; Flags: Precursor
            gi|15724242|gb|AAL06514.1|AF412061_1 At2g35500/T32F12.12
            [Arabidopsis thaliana] gi|18377827|gb|AAL67100.1|
            At2g35500/T32F12.12 [Arabidopsis thaliana]
            gi|20197350|gb|AAC36171.2| expressed protein [Arabidopsis
            thaliana] gi|330254020|gb|AEC09114.1| shikimate kinase
            like 2 [Arabidopsis thaliana]
          Length = 387

 Score =  432 bits (1112), Expect = e-119
 Identities = 212/321 (66%), Positives = 268/321 (83%)
 Frame = -2

Query: 1184 KFNSNKRMTGQSVSLNTRNYEFSDGVSEVELKIHLRDGQVKSCRDVFVNAEEGATSLTVK 1005
            +FNS       +VS +T +YEF+DG  EVEL++ L+ G++ S +D+ V+A+   TSL VK
Sbjct: 61   RFNSFSCNCLSAVSTSTIDYEFTDGGKEVELRLRLKTGEILSPKDISVDAD--GTSLAVK 118

Query: 1004 VKSPYGPLVTLLETNHLYDKIKPAETIWYIDEDQLVINLKKHDADLKWPDIVESWESLTI 825
             K   G L+TLLETNHL++KI P+ETIWYIDEDQLV+N+KK D +LKWPDIVESWESLT 
Sbjct: 119  EKRN-GLLITLLETNHLFEKIMPSETIWYIDEDQLVVNMKKVDGELKWPDIVESWESLTA 177

Query: 824  GAVRLLKGSSLYIVGESNELNQIVARELAVGLGYTPLNTSELLEAFTKQTIDSWVIAEGM 645
            G ++LLKG+S+YIVG+S E+NQ V+RELAVGLGY+PL++ ELLE+F+KQTIDSW++AEG 
Sbjct: 178  GMMQLLKGASIYIVGDSTEINQKVSRELAVGLGYSPLDSKELLESFSKQTIDSWILAEGP 237

Query: 644  DSVAKAEGAILESLSSHVRAVIATLGGEHGAAFDANKWQHLYSGFTIWLSPSETTDDIRA 465
            DSVA+AE ++LESLSSHVR V++TLGG+HGAA  A++W+HLYSGFT+W+S +E TD+  A
Sbjct: 238  DSVAEAESSVLESLSSHVRTVVSTLGGKHGAAGRADQWRHLYSGFTVWVSQTEATDEESA 297

Query: 464  KEEARRQIENGSGAYSNADVVVKMRGWDHHHAQTVAQACLSALKKLILSDKTLPGKKSLY 285
            KEEARR  +     YSNADVVVK++GWD  HA++VAQA LSALK+LI+SDK LPGKKSLY
Sbjct: 298  KEEARRSKQEREIGYSNADVVVKLQGWDPTHAKSVAQASLSALKQLIISDKGLPGKKSLY 357

Query: 284  IRLGCRGDWPNIKPPGWDPSA 222
            IRLGCRGDWPNIKPPGWDPS+
Sbjct: 358  IRLGCRGDWPNIKPPGWDPSS 378


>ref|XP_002303438.1| shikimate kinase-like protein [Populus trichocarpa]
            gi|222840870|gb|EEE78417.1| shikimate kinase-like protein
            [Populus trichocarpa]
          Length = 384

 Score =  430 bits (1106), Expect = e-118
 Identities = 226/355 (63%), Positives = 280/355 (78%), Gaps = 1/355 (0%)
 Frame = -2

Query: 1286 AIQKMMAAGTSSFSF-LPQLKKHFNFNLNNRFPCSKFNSNKRMTGQSVSLNTRNYEFSDG 1110
            +I K      ++FS  +P  K +   +  NR+  S+F+ N   T      NT NYEFSD 
Sbjct: 32   SISKTNFTSVANFSLSIPASKSNNASSPLNRY--SRFSCNCISTATP---NT-NYEFSDS 85

Query: 1109 VSEVELKIHLRDGQVKSCRDVFVNAEEGATSLTVKVKSPYGPLVTLLETNHLYDKIKPAE 930
             SEVEL++ L    ++S RD+FV+A+   TSL V+V+   G  +TL+ETN +++KIKPAE
Sbjct: 86   SSEVELRLSLVGLDIQSSRDIFVDAD--GTSLVVQVQHS-GSHITLIETNKMFEKIKPAE 142

Query: 929  TIWYIDEDQLVINLKKHDADLKWPDIVESWESLTIGAVRLLKGSSLYIVGESNELNQIVA 750
            TIW+ID+DQLVIN+KK D DLKWPDIVESWESLT G+++LLKG+S+++VG+S E+NQ VA
Sbjct: 143  TIWFIDDDQLVINMKKQDPDLKWPDIVESWESLTAGSMQLLKGASIFLVGDSTEINQKVA 202

Query: 749  RELAVGLGYTPLNTSELLEAFTKQTIDSWVIAEGMDSVAKAEGAILESLSSHVRAVIATL 570
            RELAVGLGYT L+T ELLE F KQTIDSWV+AEG DSVA+AE AILESLSSHVRAV++TL
Sbjct: 203  RELAVGLGYTLLDTQELLETFAKQTIDSWVLAEGSDSVAEAECAILESLSSHVRAVVSTL 262

Query: 569  GGEHGAAFDANKWQHLYSGFTIWLSPSETTDDIRAKEEARRQIENGSGAYSNADVVVKMR 390
            GG+ GAA  A KWQHLY+GFT+WLS +E  D+  AKEEAR+ +++ S AYSNADVVVK++
Sbjct: 263  GGKQGAAGKAYKWQHLYAGFTVWLSQTEALDEDSAKEEARKNVKDRSVAYSNADVVVKLQ 322

Query: 389  GWDHHHAQTVAQACLSALKKLILSDKTLPGKKSLYIRLGCRGDWPNIKPPGWDPS 225
            GWD  HA++VAQA LSALK+LILSDK LPGKKSLYIRLGCRGDWPNIKPPGWDPS
Sbjct: 323  GWDSDHAKSVAQASLSALKQLILSDKKLPGKKSLYIRLGCRGDWPNIKPPGWDPS 377


>ref|XP_004150663.1| PREDICTED: uncharacterized protein LOC101203272 [Cucumis sativus]
            gi|449517683|ref|XP_004165874.1| PREDICTED:
            uncharacterized LOC101203272 [Cucumis sativus]
          Length = 384

 Score =  427 bits (1098), Expect = e-117
 Identities = 214/355 (60%), Positives = 273/355 (76%)
 Frame = -2

Query: 1286 AIQKMMAAGTSSFSFLPQLKKHFNFNLNNRFPCSKFNSNKRMTGQSVSLNTRNYEFSDGV 1107
            A   +  A TS FS  P          N RF  S+F  N   +  +  + T +YEF+D  
Sbjct: 36   AFASISTALTSCFSLSPS---------NTRFS-SRFTRN--CSSSTAPVRTLDYEFTDSS 83

Query: 1106 SEVELKIHLRDGQVKSCRDVFVNAEEGATSLTVKVKSPYGPLVTLLETNHLYDKIKPAET 927
            SEVEL++ L    ++S +DV+V+A +  TSLT++V+ P G ++TLLET  L++KIKPAET
Sbjct: 84   SEVELRLQLGTQDIRSSKDVYVDAND--TSLTIRVQRP-GSIITLLETKQLFEKIKPAET 140

Query: 926  IWYIDEDQLVINLKKHDADLKWPDIVESWESLTIGAVRLLKGSSLYIVGESNELNQIVAR 747
            IWYIDEDQLVINLKKHD DLKWPDIVESWESLT G  +LLKG+S++++G+S ++NQ VA 
Sbjct: 141  IWYIDEDQLVINLKKHDPDLKWPDIVESWESLTAGFAQLLKGTSIFLIGDSTDINQKVAH 200

Query: 746  ELAVGLGYTPLNTSELLEAFTKQTIDSWVIAEGMDSVAKAEGAILESLSSHVRAVIATLG 567
            ELAVGLGYTPL+T ELLE  +KQTIDSW++AEG D+VA+ E  ++ESLSSHVRAV+ATLG
Sbjct: 201  ELAVGLGYTPLSTKELLETLSKQTIDSWMLAEGSDAVAQVENTVIESLSSHVRAVVATLG 260

Query: 566  GEHGAAFDANKWQHLYSGFTIWLSPSETTDDIRAKEEARRQIENGSGAYSNADVVVKMRG 387
            G  GAA   + W+HLY+GFT+WLS +E TD+  AKEEA+R +++   AYSNA+VVVK++G
Sbjct: 261  GRLGAAGRTDTWRHLYAGFTVWLSQTEATDESAAKEEAKRHMQDSQLAYSNAEVVVKLQG 320

Query: 386  WDHHHAQTVAQACLSALKKLILSDKTLPGKKSLYIRLGCRGDWPNIKPPGWDPSA 222
            WD  H++ VAQA LSALK+LILSDK+LP KKSLYIRLGCRGDWPNIKPPGWDP++
Sbjct: 321  WDDAHSKVVAQAALSALKQLILSDKSLPDKKSLYIRLGCRGDWPNIKPPGWDPAS 375