BLASTX nr result

ID: Coptis24_contig00014041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014041
         (848 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004172445.1| PREDICTED: homeobox-leucine zipper protein R...   441   e-122
ref|XP_002518976.1| homeobox protein, putative [Ricinus communis...   435   e-120
ref|XP_002277673.1| PREDICTED: homeobox-leucine zipper protein R...   434   e-119
ref|XP_002303433.1| predicted protein [Populus trichocarpa] gi|2...   416   e-114
ref|XP_003533444.1| PREDICTED: homeobox-leucine zipper protein R...   414   e-113

>ref|XP_004172445.1| PREDICTED: homeobox-leucine zipper protein ROC3-like [Cucumis
            sativus]
          Length = 812

 Score =  441 bits (1135), Expect = e-122
 Identities = 215/282 (76%), Positives = 241/282 (85%)
 Frame = +2

Query: 2    EFRTEATRDSVVVIMNSVTLADAFLDVNKWMDLFPSIVSSAKTVQTITSGISSHPSGSLN 181
            EFRTEATRDS VVIMNS+TL DAFLD NKWM+LFPSIV+ AKTVQ I+S +S H S SL 
Sbjct: 349  EFRTEATRDSAVVIMNSITLVDAFLDANKWMELFPSIVAKAKTVQVISSSVSGHASSSLQ 408

Query: 182  LMYAELQFLSPLVPTREAHFLRYCHQNVEEGTWAIVXXXXXXXXXXXXHSLPRYQRRPSG 361
            LMYAELQ LSPLVPTREAHFLR C QN +EG+W +V            HS PRY+R+PSG
Sbjct: 409  LMYAELQTLSPLVPTREAHFLRCCQQNADEGSWTVVDFPIDSFHDSLQHSFPRYRRKPSG 468

Query: 362  CIIQDMPNGYSRVTWVEHAEVEDKQVHPIFNHFVKSGMAFGASRWLAVLQQQCERLASLM 541
            CIIQDMPNGYSRVTWVEHAE+E+K +H IFNHFV SGMAFGA+RWLA+LQ+QCER+ASLM
Sbjct: 469  CIIQDMPNGYSRVTWVEHAEIEEKPIHQIFNHFVHSGMAFGANRWLAILQRQCERIASLM 528

Query: 542  ARNISDLGVIPSPEARKNLMKLAQRMIRRFCFNISTSGGQSWTAISDSADETVRITTRKN 721
            ARNISDLGVIPSPEAR+NLMKLAQRMIR F  NISTSGGQSWTA+SDS ++TVRITTRK 
Sbjct: 529  ARNISDLGVIPSPEARQNLMKLAQRMIRTFSVNISTSGGQSWTALSDSPEDTVRITTRKV 588

Query: 722  VEPGQPNGLILCAVSSTCLPFSHQQVFDLLRDERRRSQFDVL 847
            VEPGQPNG+IL AVS+T LP+ H +VFDLLRDERRRSQ +VL
Sbjct: 589  VEPGQPNGVILSAVSTTWLPYPHYRVFDLLRDERRRSQLEVL 630


>ref|XP_002518976.1| homeobox protein, putative [Ricinus communis]
            gi|223541963|gb|EEF43509.1| homeobox protein, putative
            [Ricinus communis]
          Length = 810

 Score =  435 bits (1118), Expect = e-120
 Identities = 216/282 (76%), Positives = 240/282 (85%)
 Frame = +2

Query: 2    EFRTEATRDSVVVIMNSVTLADAFLDVNKWMDLFPSIVSSAKTVQTITSGISSHPSGSLN 181
            E R+EATRDS VVIMNS+TL DAFLD NKWM+LFPSIV+ A+TVQ +TSG+S  PSGSL+
Sbjct: 338  ELRSEATRDSAVVIMNSITLVDAFLDANKWMELFPSIVAMARTVQILTSGVSG-PSGSLH 396

Query: 182  LMYAELQFLSPLVPTREAHFLRYCHQNVEEGTWAIVXXXXXXXXXXXXHSLPRYQRRPSG 361
            LM+AELQ LSPLVPTREA+FLRYC QNVEEGTWAIV             S P Y+RRPSG
Sbjct: 397  LMHAELQVLSPLVPTREAYFLRYCQQNVEEGTWAIVDFPIDSFHEDIQASFPLYRRRPSG 456

Query: 362  CIIQDMPNGYSRVTWVEHAEVEDKQVHPIFNHFVKSGMAFGASRWLAVLQQQCERLASLM 541
            C+IQDMPNGYSRVTWVEHAE E+K VH IF+HFV SGMAFGA RWL VLQ+QCER+ASLM
Sbjct: 457  CVIQDMPNGYSRVTWVEHAETEEKPVHQIFSHFVYSGMAFGAHRWLGVLQRQCERVASLM 516

Query: 542  ARNISDLGVIPSPEARKNLMKLAQRMIRRFCFNISTSGGQSWTAISDSADETVRITTRKN 721
            ARNISDLGVIPSPEARKNLM+LAQRMIR FC NIST  GQSWTA+SDS+D+TVRITTRK 
Sbjct: 517  ARNISDLGVIPSPEARKNLMRLAQRMIRTFCMNISTCSGQSWTALSDSSDDTVRITTRKI 576

Query: 722  VEPGQPNGLILCAVSSTCLPFSHQQVFDLLRDERRRSQFDVL 847
             EPGQPNG+IL AVS+T LP+ H QVFD+LRDERRRSQ DVL
Sbjct: 577  TEPGQPNGVILSAVSTTWLPYPHYQVFDILRDERRRSQLDVL 618


>ref|XP_002277673.1| PREDICTED: homeobox-leucine zipper protein ROC3 [Vitis vinifera]
            gi|147777871|emb|CAN60291.1| hypothetical protein
            VITISV_032685 [Vitis vinifera]
            gi|297742043|emb|CBI33830.3| unnamed protein product
            [Vitis vinifera]
          Length = 798

 Score =  434 bits (1116), Expect = e-119
 Identities = 217/282 (76%), Positives = 239/282 (84%)
 Frame = +2

Query: 2    EFRTEATRDSVVVIMNSVTLADAFLDVNKWMDLFPSIVSSAKTVQTITSGISSHPSGSLN 181
            EFRTEATRDS VVIMNS+ L DAFLD  KWM+LFPSI+S AKTVQ + SG+S H +GSL+
Sbjct: 336  EFRTEATRDSAVVIMNSINLVDAFLDAMKWMELFPSIISRAKTVQVL-SGVSGHANGSLH 394

Query: 182  LMYAELQFLSPLVPTREAHFLRYCHQNVEEGTWAIVXXXXXXXXXXXXHSLPRYQRRPSG 361
            LMYAELQ LSPLVPTRE HFLRYC QNV+EGTWAIV             S+PRY+RRPSG
Sbjct: 395  LMYAELQVLSPLVPTRETHFLRYCQQNVDEGTWAIVDFPIDSFNDNLQPSVPRYRRRPSG 454

Query: 362  CIIQDMPNGYSRVTWVEHAEVEDKQVHPIFNHFVKSGMAFGASRWLAVLQQQCERLASLM 541
            CIIQDMPNGYSRVTWVEHA+VE+K VH IF+HFV SGMAFGA+RWLAVLQ+QCER+ASLM
Sbjct: 455  CIIQDMPNGYSRVTWVEHADVEEKPVHHIFHHFVNSGMAFGATRWLAVLQRQCERVASLM 514

Query: 542  ARNISDLGVIPSPEARKNLMKLAQRMIRRFCFNISTSGGQSWTAISDSADETVRITTRKN 721
            ARNISDLGVIPSPEARKNLM LAQRMIR F  NISTS GQSWTA+SDS+D+TVRITTRK 
Sbjct: 515  ARNISDLGVIPSPEARKNLMNLAQRMIRTFSVNISTSSGQSWTALSDSSDDTVRITTRKI 574

Query: 722  VEPGQPNGLILCAVSSTCLPFSHQQVFDLLRDERRRSQFDVL 847
             EPGQPNG+IL AVS+T LP  H  VFDLLRDERRR+Q DVL
Sbjct: 575  TEPGQPNGVILSAVSTTWLPHPHYHVFDLLRDERRRAQLDVL 616


>ref|XP_002303433.1| predicted protein [Populus trichocarpa] gi|222840865|gb|EEE78412.1|
            predicted protein [Populus trichocarpa]
          Length = 774

 Score =  416 bits (1070), Expect = e-114
 Identities = 208/282 (73%), Positives = 233/282 (82%)
 Frame = +2

Query: 2    EFRTEATRDSVVVIMNSVTLADAFLDVNKWMDLFPSIVSSAKTVQTITSGISSHPSGSLN 181
            E RTEATRD  VVIMNS+TL DAFLD NKWM+LFPSIV+ AKTVQ IT GIS   SGSL+
Sbjct: 337  ETRTEATRDCAVVIMNSITLVDAFLDANKWMELFPSIVARAKTVQVITPGISG-ASGSLH 395

Query: 182  LMYAELQFLSPLVPTREAHFLRYCHQNVEEGTWAIVXXXXXXXXXXXXHSLPRYQRRPSG 361
            LMYAELQ LSPLVPTRE +FLR+CHQNVEEGTWAIV             S P Y+R PSG
Sbjct: 396  LMYAELQVLSPLVPTRETYFLRFCHQNVEEGTWAIVDFPLDRLHDNIQPSFPLYKRHPSG 455

Query: 362  CIIQDMPNGYSRVTWVEHAEVEDKQVHPIFNHFVKSGMAFGASRWLAVLQQQCERLASLM 541
            C+IQDMPNGYSRVTW+EHAE+E+K VH IF+ +V SGMAFGA RWL VLQ+QCER+ASLM
Sbjct: 456  CVIQDMPNGYSRVTWIEHAEIEEKPVHQIFSQYVYSGMAFGAHRWLTVLQRQCERVASLM 515

Query: 542  ARNISDLGVIPSPEARKNLMKLAQRMIRRFCFNISTSGGQSWTAISDSADETVRITTRKN 721
            ARNISDLGVIPSPEARKN+M+LAQRMIR F  NIS+S GQSWT +SDS D+TVRITTRK 
Sbjct: 516  ARNISDLGVIPSPEARKNMMRLAQRMIRIFSLNISSSSGQSWTGLSDSYDDTVRITTRKI 575

Query: 722  VEPGQPNGLILCAVSSTCLPFSHQQVFDLLRDERRRSQFDVL 847
             EPGQPNG+IL AVS+T LP+ H QVFDLLRDE RRSQ ++L
Sbjct: 576  TEPGQPNGVILSAVSTTWLPYPHYQVFDLLRDEHRRSQLELL 617


>ref|XP_003533444.1| PREDICTED: homeobox-leucine zipper protein ROC3-like [Glycine max]
          Length = 807

 Score =  414 bits (1063), Expect = e-113
 Identities = 209/282 (74%), Positives = 230/282 (81%)
 Frame = +2

Query: 2    EFRTEATRDSVVVIMNSVTLADAFLDVNKWMDLFPSIVSSAKTVQTITSGISSHPSGSLN 181
            E RTEA+RD+ VVIMNSVTL DAFLD  KWM+LFP+IVS AKTVQ I+SG S   SG+L 
Sbjct: 343  ELRTEASRDTSVVIMNSVTLVDAFLDAQKWMELFPTIVSRAKTVQIISSGASGLASGTLQ 402

Query: 182  LMYAELQFLSPLVPTREAHFLRYCHQNVEEGTWAIVXXXXXXXXXXXXHSLPRYQRRPSG 361
            LMYAE Q LSPLV TRE HFLRYC QN EEGTWAIV             S PRY RR SG
Sbjct: 403  LMYAEFQVLSPLVSTRETHFLRYCQQNAEEGTWAIVDFPVDSFHQNFHPSYPRYCRRSSG 462

Query: 362  CIIQDMPNGYSRVTWVEHAEVEDKQVHPIFNHFVKSGMAFGASRWLAVLQQQCERLASLM 541
            C+IQDMPNGYSRVTWVEHA+VE+K VH IF ++V SGMAFGA RWL VLQ+QCER+ASLM
Sbjct: 463  CVIQDMPNGYSRVTWVEHAKVEEKPVHQIFCNYVYSGMAFGAQRWLGVLQRQCERVASLM 522

Query: 542  ARNISDLGVIPSPEARKNLMKLAQRMIRRFCFNISTSGGQSWTAISDSADETVRITTRKN 721
            ARNISDLG IPSPEARKNLMKLAQRMI+ F  N+STSGGQSWTAISDS ++TVRITTRK 
Sbjct: 523  ARNISDLGAIPSPEARKNLMKLAQRMIKTFSLNMSTSGGQSWTAISDSPEDTVRITTRKI 582

Query: 722  VEPGQPNGLILCAVSSTCLPFSHQQVFDLLRDERRRSQFDVL 847
             EPGQPNG+IL AVS+T LP+SH +VFDLLRDERRRSQ D L
Sbjct: 583  TEPGQPNGVILSAVSTTWLPYSHTKVFDLLRDERRRSQMDAL 624


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