BLASTX nr result

ID: Coptis24_contig00014033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014033
         (682 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276293.2| PREDICTED: uncharacterized protein LOC100266...   124   1e-26
emb|CBI15455.3| unnamed protein product [Vitis vinifera]              124   2e-26
ref|XP_002321475.1| NAC domain protein, IPR003441 [Populus trich...   121   1e-25
ref|XP_003530013.1| PREDICTED: NAC domain-containing protein 100...   105   1e-20
ref|XP_002532152.1| transcription factor, putative [Ricinus comm...   103   2e-20

>ref|XP_002276293.2| PREDICTED: uncharacterized protein LOC100266459 [Vitis vinifera]
          Length = 539

 Score =  124 bits (312), Expect = 1e-26
 Identities = 83/196 (42%), Positives = 107/196 (54%), Gaps = 26/196 (13%)
 Frame = -1

Query: 682 SYKPTKEEWVVCRVFQKSSAVKKPQETS-----SLESPCHNTTMVNELGEIELPHLNGLT 518
           S+KP KEEWVVCRVF+KSSAVKKP + +     SLESPC   T+V+E G+IE P++N + 
Sbjct: 146 SFKPKKEEWVVCRVFKKSSAVKKPHQPAPSSLPSLESPCDTNTIVSEFGDIEFPNMNSIA 205

Query: 517 NSSSGFSAI--------STXXXXXXXXXXXVAMNWASAREAANHPXXXXXXXXXXXXXXX 362
           NSSSGFS I        ST           + MNWA+AREAA+ P               
Sbjct: 206 NSSSGFSNINSAQSYNTSTDDNLNMNMNMNMNMNWAAAREAASLP-SLPWSSSLLSPNLQ 264

Query: 361 XXXXXLTALQLRGYQP----TSSDLNFLAQGNYRIGTDLNMDFATSSSKMVDS------- 215
                + ALQL  Y+P    ++ + +FL QG    GTD   +F  SSSK++DS       
Sbjct: 265 MNSLLIKALQLGSYRPREATSTENYSFLPQGISNFGTDFISNFQASSSKVLDSLHQQQQQ 324

Query: 214 -AQQLPYNPDSI-WRG 173
             Q+ P+N DSI W G
Sbjct: 325 QQQEQPFNLDSINWFG 340


>emb|CBI15455.3| unnamed protein product [Vitis vinifera]
          Length = 327

 Score =  124 bits (310), Expect = 2e-26
 Identities = 81/192 (42%), Positives = 105/192 (54%), Gaps = 25/192 (13%)
 Frame = -1

Query: 682 SYKPTKEEWVVCRVFQKSSAVKKPQETS-----SLESPCHNTTMVNELGEIELPHLNGLT 518
           S+KP KEEWVVCRVF+KSSAVKKP + +     SLESPC   T+V+E G+IE P++N + 
Sbjct: 135 SFKPKKEEWVVCRVFKKSSAVKKPHQPAPSSLPSLESPCDTNTIVSEFGDIEFPNMNSIA 194

Query: 517 NSSSGFSAI--------STXXXXXXXXXXXVAMNWASAREAANHPXXXXXXXXXXXXXXX 362
           NSSSGFS I        ST           + MNWA+AREAA+ P               
Sbjct: 195 NSSSGFSNINSAQSYNTSTDDNLNMNMNMNMNMNWAAAREAASLP-SLPWSSSLLSPNLQ 253

Query: 361 XXXXXLTALQLRGYQP----TSSDLNFLAQGNYRIGTDLNMDFATSSSKMVDS------- 215
                + ALQL  Y+P    ++ + +FL QG    GTD   +F  SSSK++DS       
Sbjct: 254 MNSLLIKALQLGSYRPREATSTENYSFLPQGISNFGTDFISNFQASSSKVLDSLHQQQQQ 313

Query: 214 -AQQLPYNPDSI 182
             Q+ P+N DSI
Sbjct: 314 QQQEQPFNLDSI 325


>ref|XP_002321475.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222868471|gb|EEF05602.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 321

 Score =  121 bits (303), Expect = 1e-25
 Identities = 84/184 (45%), Positives = 106/184 (57%), Gaps = 17/184 (9%)
 Frame = -1

Query: 679 YKPTKEEWVVCRVFQKSSAVKKPQE----TSSLESPCHNTTMVN-ELGEIELPHLNGLTN 515
           +K TKEEWVVCR+FQKS+AVKKPQ+      SL S C   ++VN + G+IELP+LN + N
Sbjct: 138 FKSTKEEWVVCRIFQKSTAVKKPQQEPSSQQSLGSLCDTNSIVNDQYGDIELPNLNRIAN 197

Query: 514 SSSGFSAISTXXXXXXXXXXXVA-MNWASAREAANHP-XXXXXXXXXXXXXXXXXXXXLT 341
           SSSGFS IS               MNWA+AREAA+                       L 
Sbjct: 198 SSSGFSNISAHTYNNESNVNMNLNMNWAAAREAAHTTLPSLSWPPGLLSSNLTTNSLLLK 257

Query: 340 ALQLRGYQ---PTSSDLNFLAQGN--YRIGTDLNMDF-ATSSSKMVDSA----QQLPYNP 191
           ALQLR YQ    T++D +FL  GN  +  GTDL  +F A+SSSK++DS     Q+ P+N 
Sbjct: 258 ALQLRSYQQREATTTDYSFLTNGNIVHEFGTDLGSNFQASSSSKVLDSVPQPQQEQPFNL 317

Query: 190 DSIW 179
           DSIW
Sbjct: 318 DSIW 321


>ref|XP_003530013.1| PREDICTED: NAC domain-containing protein 100-like [Glycine max]
          Length = 349

 Score =  105 bits (261), Expect = 1e-20
 Identities = 72/189 (38%), Positives = 96/189 (50%), Gaps = 22/189 (11%)
 Frame = -1

Query: 679 YKPTKEEWVVCRVFQKSSAVKKPQET--SSLESPCHNTTMVNELGEIELPHL-------- 530
           + P+K+EWVVCRVFQKS  VK+PQ+T  S  ESPC   +MVNE G++ELP+L        
Sbjct: 161 FGPSKDEWVVCRVFQKSLQVKRPQQTPSSQPESPCDTASMVNEFGDVELPNLINNIANSS 220

Query: 529 NGLTNSSSGFSAISTXXXXXXXXXXXVAMNWASAREAANHP--XXXXXXXXXXXXXXXXX 356
            GLTN+ SG +  +            +AMNW  A E    P                   
Sbjct: 221 GGLTNNISGQTCFNADLINSVNTNMNLAMNWPVASEVIQVPTLPSLPWPSGLLNPSISVN 280

Query: 355 XXXLTALQLRGYQPTSSD-----LNFLAQGNYRIGTDLNMDFATSSSKMVD---SAQQL- 203
              L ALQLR YQ   +       +++ QG   +GTDL+ +   SSSK+++     QQL 
Sbjct: 281 SLLLKALQLRSYQQREAATDHLIASYVPQGVSHVGTDLSSNLTASSSKVLECMPQQQQLE 340

Query: 202 -PYNPDSIW 179
            P+N DSIW
Sbjct: 341 QPFNLDSIW 349


>ref|XP_002532152.1| transcription factor, putative [Ricinus communis]
           gi|223528162|gb|EEF30226.1| transcription factor,
           putative [Ricinus communis]
          Length = 333

 Score =  103 bits (258), Expect = 2e-20
 Identities = 83/198 (41%), Positives = 106/198 (53%), Gaps = 31/198 (15%)
 Frame = -1

Query: 679 YKPTKEEWVVCRVFQK-SSAVKKPQETS----SLESPCHNTTMVNELGEIELPHLNGLTN 515
           +KPTKEEWVVCRVFQK SSA KKPQ+ S    SL SPC   ++VNE G+IELP+LN   N
Sbjct: 136 FKPTKEEWVVCRVFQKSSSAAKKPQQASSSQQSLGSPCDTNSVVNEFGDIELPNLNSFVN 195

Query: 514 -SSSGFSAISTXXXXXXXXXXXVA------MNWASARE---AANHPXXXXXXXXXXXXXX 365
            SSSGF+ +S                    +NWA+ RE   AA                 
Sbjct: 196 SSSSGFNNMSAQSYNNENNVNMNMINTNLNVNWAATREAVVAAATLPSLSWPSSLLTSDL 255

Query: 364 XXXXXXLTALQLRGYQ------PTSSDLNFLAQGNY-RIG-TDLNMDF--ATSSSKMVDS 215
                 L ALQLR YQ       +++D +FLAQG   + G TDL+ +F  ++SSSK ++S
Sbjct: 256 TMNSLILKALQLRSYQQREAAAASNNDYSFLAQGIMPQFGSTDLSSNFQASSSSSKGLES 315

Query: 214 ------AQQLPYNPDSIW 179
                  Q+ P+N DSIW
Sbjct: 316 LPQQQQQQEQPFNLDSIW 333


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