BLASTX nr result

ID: Coptis24_contig00014025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014025
         (731 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308177.1| predicted protein [Populus trichocarpa] gi|2...    60   4e-07
ref|XP_003632668.1| PREDICTED: uncharacterized protein LOC100261...    59   1e-06
ref|XP_002534277.1| conserved hypothetical protein [Ricinus comm...    59   1e-06
ref|XP_002322919.1| predicted protein [Populus trichocarpa] gi|2...    57   4e-06

>ref|XP_002308177.1| predicted protein [Populus trichocarpa] gi|222854153|gb|EEE91700.1|
           predicted protein [Populus trichocarpa]
          Length = 100

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 31/54 (57%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
 Frame = -1

Query: 701 MEGVIPSVYRAIVRYKSSKHGSIARSWSTQSPSSASYMRL-GDSGRIQASEVQL 543
           MEG+IP VYRAI++YK+ K      SW  +SP SASYMRL GDSGR Q S++++
Sbjct: 1   MEGLIPFVYRAIIQYKNGKEAGPLGSWFNESP-SASYMRLPGDSGRFQTSDIRI 53


>ref|XP_003632668.1| PREDICTED: uncharacterized protein LOC100261261 [Vitis vinifera]
          Length = 92

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 39/97 (40%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
 Frame = -1

Query: 701 MEGVIPSVYRAIVRYKSSKHGSIARSWSTQSPSSASYMRLGDSGRIQASEVQLLLRNDIV 522
           MEG+IP VYRAIV+YK+       RSW ++SPS +  +  GDSGR Q S++Q L R+D  
Sbjct: 1   MEGLIPFVYRAIVQYKNGGQ----RSWLSESPSCSYILLPGDSGRFQTSDIQ-LFRSDYA 55

Query: 521 FXXXXXXXXXXXNAISV-----TQSPLRFANPRRFVT 426
           F               +      QSP R    RR VT
Sbjct: 56  FSATSSSSMAPSANAKIMVSTGVQSPARRMTSRRVVT 92


>ref|XP_002534277.1| conserved hypothetical protein [Ricinus communis]
           gi|223525593|gb|EEF28108.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 106

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 32/55 (58%), Positives = 41/55 (74%), Gaps = 2/55 (3%)
 Frame = -1

Query: 701 MEGVIPSVYRAIVRYKSSKHGSIARSWSTQSPSSASYMRL--GDSGRIQASEVQL 543
           MEG+IP VYRAI++YK+   G +  SW  +SPSS  YMRL  GDSGR QAS+++L
Sbjct: 1   MEGLIPFVYRAIMQYKNGNEGPLG-SWLNESPSSC-YMRLPTGDSGRFQASDIRL 53


>ref|XP_002322919.1| predicted protein [Populus trichocarpa] gi|222867549|gb|EEF04680.1|
           predicted protein [Populus trichocarpa]
          Length = 99

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 30/55 (54%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
 Frame = -1

Query: 701 MEGVIPSVYRAIVRYKSSKHGSIARSWSTQSPSSASYMRL-GDSGRIQASEVQLL 540
           MEG+IP VYRAI+++ + K      SW ++SP SASYMRL GDSGR Q S++++L
Sbjct: 1   MEGLIPFVYRAIMQFNNGKEAGPLGSWFSESP-SASYMRLPGDSGRFQKSDLRIL 54


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