BLASTX nr result

ID: Coptis24_contig00014017 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014017
         (625 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABP96983.1| cellulase [Colocasia esculenta]                        100   2e-19
gb|AEN70797.1| endo-1,4-beta-glucanase [Gossypium schwendimanii]       98   1e-18
gb|AAQ08018.1| endo-1,4-beta-glucanase [Gossypium hirsutum] gi|3...    97   2e-18
gb|AEN70816.1| endo-1,4-beta-glucanase [Gossypium gossypioides]        97   2e-18
gb|AEN70798.1| endo-1,4-beta-glucanase [Gossypium turneri] gi|34...    97   2e-18

>gb|ABP96983.1| cellulase [Colocasia esculenta]
          Length = 618

 Score =  100 bits (249), Expect = 2e-19
 Identities = 47/60 (78%), Positives = 56/60 (93%)
 Frame = -2

Query: 624 NIVVGAMVAGPDKNDEFRDVRTNYNYTEPTLAGNAGLVASLVALSGVRTGIDINSMFSAV 445
           N +VGAM+AGPDK+D F+DVRTNYNYTEPTLAGNAGLVA+LV+LSGV+ GID N++FSAV
Sbjct: 543 NTIVGAMIAGPDKHDGFKDVRTNYNYTEPTLAGNAGLVAALVSLSGVQAGIDKNTIFSAV 602


>gb|AEN70797.1| endo-1,4-beta-glucanase [Gossypium schwendimanii]
          Length = 619

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 50/61 (81%), Positives = 56/61 (91%), Gaps = 1/61 (1%)
 Frame = -2

Query: 624 NIVVGAMVAGPDKNDEFRDVRTNYNYTEPTLAGNAGLVASLVALSGVR-TGIDINSMFSA 448
           N +VGAMVAGPDK+D FRDVRTNYNYTEPTLAGNAGLVA+LVALSG + TGID N++FSA
Sbjct: 543 NTLVGAMVAGPDKHDAFRDVRTNYNYTEPTLAGNAGLVAALVALSGDKATGIDKNTIFSA 602

Query: 447 V 445
           V
Sbjct: 603 V 603


>gb|AAQ08018.1| endo-1,4-beta-glucanase [Gossypium hirsutum]
           gi|324984021|gb|ADY68793.1| membrane-anchored
           endo-1,4-beta-glucanase [Gossypium raimondii]
           gi|324984025|gb|ADY68795.1| membrane-anchored
           endo-1,4-beta-glucanase [Gossypium hirsutum]
           gi|345103947|gb|AEN70795.1| endo-1,4-beta-glucanase
           [Gossypium thurberi] gi|345103949|gb|AEN70796.1|
           endo-1,4-beta-glucanase [Gossypium laxum]
           gi|345103957|gb|AEN70800.1| endo-1,4-beta-glucanase
           [Gossypium mustelinum] gi|345103983|gb|AEN70813.1|
           endo-1,4-beta-glucanase [Gossypium davidsonii]
           gi|345103985|gb|AEN70814.1| endo-1,4-beta-glucanase
           [Gossypium klotzschianum] gi|345103987|gb|AEN70815.1|
           endo-1,4-beta-glucanase [Gossypium aridum]
           gi|345103991|gb|AEN70817.1| endo-1,4-beta-glucanase
           [Gossypium lobatum] gi|345103993|gb|AEN70818.1|
           endo-1,4-beta-glucanase [Gossypium trilobum]
          Length = 619

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 50/61 (81%), Positives = 56/61 (91%), Gaps = 1/61 (1%)
 Frame = -2

Query: 624 NIVVGAMVAGPDKNDEFRDVRTNYNYTEPTLAGNAGLVASLVALSGVR-TGIDINSMFSA 448
           N +VGAMVAGPDK+D FRDVRTNYNYTEPTLAGNAGLVA+LVALSG + TGID N++FSA
Sbjct: 543 NTLVGAMVAGPDKHDGFRDVRTNYNYTEPTLAGNAGLVAALVALSGDKATGIDKNTIFSA 602

Query: 447 V 445
           V
Sbjct: 603 V 603


>gb|AEN70816.1| endo-1,4-beta-glucanase [Gossypium gossypioides]
          Length = 619

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 50/61 (81%), Positives = 56/61 (91%), Gaps = 1/61 (1%)
 Frame = -2

Query: 624 NIVVGAMVAGPDKNDEFRDVRTNYNYTEPTLAGNAGLVASLVALSGVR-TGIDINSMFSA 448
           N +VGAMVAGPDK+D FRDVRTNYNYTEPTLAGNAGLVA+LVALSG + TGID N++FSA
Sbjct: 543 NTLVGAMVAGPDKHDGFRDVRTNYNYTEPTLAGNAGLVAALVALSGDKATGIDKNTIFSA 602

Query: 447 V 445
           V
Sbjct: 603 V 603


>gb|AEN70798.1| endo-1,4-beta-glucanase [Gossypium turneri]
           gi|345103979|gb|AEN70811.1| endo-1,4-beta-glucanase
           [Gossypium armourianum] gi|345103981|gb|AEN70812.1|
           endo-1,4-beta-glucanase [Gossypium harknessii]
          Length = 619

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 50/61 (81%), Positives = 56/61 (91%), Gaps = 1/61 (1%)
 Frame = -2

Query: 624 NIVVGAMVAGPDKNDEFRDVRTNYNYTEPTLAGNAGLVASLVALSGVR-TGIDINSMFSA 448
           N +VGAMVAGPDK+D FRDVRTNYNYTEPTLAGNAGLVA+LVALSG + TGID N++FSA
Sbjct: 543 NTLVGAMVAGPDKHDGFRDVRTNYNYTEPTLAGNAGLVAALVALSGDKATGIDKNTIFSA 602

Query: 447 V 445
           V
Sbjct: 603 V 603


Top