BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014011
         (750 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140914.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   266   3e-69
ref|XP_002265199.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   262   6e-68
emb|CBI16734.3| unnamed protein product [Vitis vinifera]              262   6e-68
ref|NP_001239966.1| uncharacterized protein LOC100816956 [Glycin...   254   2e-65
ref|XP_002880123.1| hypothetical protein ARALYDRAFT_483580 [Arab...   251   1e-64

>ref|XP_004140914.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           assembly factor 3-like [Cucumis sativus]
           gi|449454472|ref|XP_004144978.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 alpha subcomplex assembly
           factor 3-like [Cucumis sativus]
           gi|449463645|ref|XP_004149542.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 alpha subcomplex assembly
           factor 3-like [Cucumis sativus]
          Length = 171

 Score =  266 bits (681), Expect = 3e-69
 Identities = 131/171 (76%), Positives = 150/171 (87%), Gaps = 2/171 (1%)
 Frame = -3

Query: 745 MAVRHRVTATLPYLMRTIRKDT--PNHQPPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 572
           MA R +  ATL  L+RT++ D   P    PLPSLRRAFSLYDQINLIDNVPEDQLRFQRY
Sbjct: 1   MAARQKAVATLLNLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60

Query: 571 TDTGFTVNGIDYEGSLICVGNLLMNWNPQKVSEITPDSLSIFKLIRPIPEILIIGSGRYV 392
           T+TGFTVNG+DYEGSL+CVGNLLM+W P+K SEIT DSLSIF+++RPIPEILI+G GRY 
Sbjct: 61  TETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITSDSLSIFQIVRPIPEILILGCGRYT 120

Query: 391 DRVNPEVRRFIRSTGMKLEEIDSRNASSTYNILNEEGRIVAAALLPYGVSS 239
           + VNPE+R+FIRSTGMKLE +D+RNA+STYNILNEEGRIVAAALLPYGVSS
Sbjct: 121 EPVNPELRQFIRSTGMKLEAVDTRNATSTYNILNEEGRIVAAALLPYGVSS 171


>ref|XP_002265199.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           assembly factor 3-like [Vitis vinifera]
          Length = 173

 Score =  262 bits (669), Expect = 6e-68
 Identities = 127/169 (75%), Positives = 151/169 (89%), Gaps = 1/169 (0%)
 Frame = -3

Query: 745 MAVRHRVTATLPYLMRTIRKDTPNHQP-PLPSLRRAFSLYDQINLIDNVPEDQLRFQRYT 569
           M VR R  ATLP LMR +RK+ P     PLPSLRRAFSLYDQINLIDNVPEDQLRFQ YT
Sbjct: 2   MFVRQRAVATLPTLMRALRKEPPKPTTQPLPSLRRAFSLYDQINLIDNVPEDQLRFQGYT 61

Query: 568 DTGFTVNGIDYEGSLICVGNLLMNWNPQKVSEITPDSLSIFKLIRPIPEILIIGSGRYVD 389
           DTGFTV+G+ YEGSL+CVGN+L++W P+K+SEIT DSLSIF+++RPIPEILI+G GR+++
Sbjct: 62  DTGFTVSGVQYEGSLLCVGNVLLSWGPKKLSEITADSLSIFRIVRPIPEILILGCGRHIE 121

Query: 388 RVNPEVRRFIRSTGMKLEEIDSRNASSTYNILNEEGRIVAAALLPYGVS 242
           +V+PE+RR+I+STGMKLE +DSRNA+STYNILNEEGRIVAAALLPYGVS
Sbjct: 122 QVDPELRRYIQSTGMKLEAVDSRNAASTYNILNEEGRIVAAALLPYGVS 170


>emb|CBI16734.3| unnamed protein product [Vitis vinifera]
          Length = 172

 Score =  262 bits (669), Expect = 6e-68
 Identities = 127/169 (75%), Positives = 151/169 (89%), Gaps = 1/169 (0%)
 Frame = -3

Query: 745 MAVRHRVTATLPYLMRTIRKDTPNHQP-PLPSLRRAFSLYDQINLIDNVPEDQLRFQRYT 569
           M VR R  ATLP LMR +RK+ P     PLPSLRRAFSLYDQINLIDNVPEDQLRFQ YT
Sbjct: 1   MFVRQRAVATLPTLMRALRKEPPKPTTQPLPSLRRAFSLYDQINLIDNVPEDQLRFQGYT 60

Query: 568 DTGFTVNGIDYEGSLICVGNLLMNWNPQKVSEITPDSLSIFKLIRPIPEILIIGSGRYVD 389
           DTGFTV+G+ YEGSL+CVGN+L++W P+K+SEIT DSLSIF+++RPIPEILI+G GR+++
Sbjct: 61  DTGFTVSGVQYEGSLLCVGNVLLSWGPKKLSEITADSLSIFRIVRPIPEILILGCGRHIE 120

Query: 388 RVNPEVRRFIRSTGMKLEEIDSRNASSTYNILNEEGRIVAAALLPYGVS 242
           +V+PE+RR+I+STGMKLE +DSRNA+STYNILNEEGRIVAAALLPYGVS
Sbjct: 121 QVDPELRRYIQSTGMKLEAVDSRNAASTYNILNEEGRIVAAALLPYGVS 169


>ref|NP_001239966.1| uncharacterized protein LOC100816956 [Glycine max]
           gi|255648257|gb|ACU24581.1| unknown [Glycine max]
          Length = 174

 Score =  254 bits (648), Expect = 2e-65
 Identities = 127/174 (72%), Positives = 147/174 (84%), Gaps = 5/174 (2%)
 Frame = -3

Query: 745 MAVRHRVTATLPYLMRTIRKDTPN-----HQPPLPSLRRAFSLYDQINLIDNVPEDQLRF 581
           MAVR R  + LP L+RT+RK+        H   LPSLRRAFSLYDQINLID VPEDQLRF
Sbjct: 1   MAVRQRAVSALPTLLRTLRKEPLKPRNHAHVNALPSLRRAFSLYDQINLIDQVPEDQLRF 60

Query: 580 QRYTDTGFTVNGIDYEGSLICVGNLLMNWNPQKVSEITPDSLSIFKLIRPIPEILIIGSG 401
           Q Y DTGFTVNG++YEGSL+CVGNLLM+W P+K SEIT DSLSIF+++RPIPEILIIG G
Sbjct: 61  QGYNDTGFTVNGVEYEGSLLCVGNLLMSWKPKKFSEITADSLSIFQIVRPIPEILIIGCG 120

Query: 400 RYVDRVNPEVRRFIRSTGMKLEEIDSRNASSTYNILNEEGRIVAAALLPYGVSS 239
           + +  V+PE+RRFIRSTG+KLE +DSRNA+STYNILNEEGRIVAAALLP+GVSS
Sbjct: 121 KNIQHVDPELRRFIRSTGIKLEAVDSRNAASTYNILNEEGRIVAAALLPHGVSS 174


>ref|XP_002880123.1| hypothetical protein ARALYDRAFT_483580 [Arabidopsis lyrata subsp.
           lyrata] gi|297325962|gb|EFH56382.1| hypothetical protein
           ARALYDRAFT_483580 [Arabidopsis lyrata subsp. lyrata]
          Length = 170

 Score =  251 bits (641), Expect = 1e-64
 Identities = 122/170 (71%), Positives = 147/170 (86%), Gaps = 1/170 (0%)
 Frame = -3

Query: 745 MAVRHRVTATLPYLMRTIRKDTPNH-QPPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYT 569
           MA+R +  ATLP L++++RK+ P H  P LPSLRRAFSLYDQINLIDNVPEDQLRFQ + 
Sbjct: 1   MAMRLKSMATLPKLIQSMRKEVPKHANPVLPSLRRAFSLYDQINLIDNVPEDQLRFQEFN 60

Query: 568 DTGFTVNGIDYEGSLICVGNLLMNWNPQKVSEITPDSLSIFKLIRPIPEILIIGSGRYVD 389
           DT FTVNG+ YEGSL+CVGNLLM+W+P+K SEIT DSLSIF+ +RPIPE+LI+G GR + 
Sbjct: 61  DTSFTVNGVKYEGSLLCVGNLLMSWSPRKFSEITTDSLSIFQTVRPIPELLIVGCGRDIH 120

Query: 388 RVNPEVRRFIRSTGMKLEEIDSRNASSTYNILNEEGRIVAAALLPYGVSS 239
            V PEVR+F++S GMKLE +DSRNA+STYNILNEEGR+VAAALLPYGV+S
Sbjct: 121 PVTPEVRQFVKSLGMKLETVDSRNAASTYNILNEEGRVVAAALLPYGVTS 170