BLASTX nr result
ID: Coptis24_contig00014010
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00014010 (1162 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002315274.1| predicted protein [Populus trichocarpa] gi|1... 298 2e-78 ref|XP_002278641.2| PREDICTED: uncharacterized protein LOC100265... 298 2e-78 ref|XP_002523906.1| RNA-binding region-containing protein, putat... 296 7e-78 ref|XP_002312040.1| predicted protein [Populus trichocarpa] gi|2... 291 2e-76 ref|XP_004143608.1| PREDICTED: uncharacterized protein LOC101202... 280 5e-73 >ref|XP_002315274.1| predicted protein [Populus trichocarpa] gi|118481097|gb|ABK92502.1| unknown [Populus trichocarpa] gi|222864314|gb|EEF01445.1| predicted protein [Populus trichocarpa] Length = 253 Score = 298 bits (763), Expect = 2e-78 Identities = 164/265 (61%), Positives = 190/265 (71%), Gaps = 13/265 (4%) Frame = -2 Query: 1098 MSNHNNIGGQFGDTTLTKVFVGGLAWETQNEAMKDYFDKYGEILEAVIISDKITGRSKGY 919 M+ NNI GQFGDTTLTKVFVGGLAWET +AM+++F+KYGEILEAVIISDKITGRSKGY Sbjct: 1 MTMSNNIAGQFGDTTLTKVFVGGLAWETPKDAMREHFEKYGEILEAVIISDKITGRSKGY 60 Query: 918 GFVTFKEPESATKACEDPTPVINGRRANCNLASLGARRPRSLSTTSPQ---GCNVGPRST 748 GFVTFKE ESA KACED +P+INGRRANCNLASLGARRPRS + PQ N GPRST Sbjct: 61 GFVTFKEAESAKKACEDASPIINGRRANCNLASLGARRPRSATPAPPQQGPNINAGPRST 120 Query: 747 TXXXXXXXXANQVQWYYPAGT--PTTPFHHQ-PQAIPYHAYGYSPTYITTDIGYNQKLXX 577 AN VQWYYPAG+ +PFHHQ QA+P+ YGYSP YI TD N KL Sbjct: 121 -----PAAPANHVQWYYPAGSAAAASPFHHQHHQAVPF--YGYSPAYIATDTSGNHKL-- 171 Query: 576 XXXXXXXXXYVKGGHYSQVYPAQGM------MPVYPVYHFNRPPAMGVAAAPHIYHPYTT 415 GH+SQVYP Q M MP+YP YHF++ AMG+ AA HI+ P TT Sbjct: 172 ----NYTGGSYMNGHFSQVYPGQAMVGANTLMPMYPFYHFHQSQAMGLPAA-HIFPP-TT 225 Query: 414 AGSVTTIPAVISKPPTMA-PNAVCL 343 AG +TT+P ++SKPP++A P+AVCL Sbjct: 226 AGPMTTVPTIMSKPPSIAPPSAVCL 250 >ref|XP_002278641.2| PREDICTED: uncharacterized protein LOC100265113 [Vitis vinifera] Length = 254 Score = 298 bits (762), Expect = 2e-78 Identities = 159/258 (61%), Positives = 185/258 (71%), Gaps = 9/258 (3%) Frame = -2 Query: 1086 NNIGGQFGDTTLTKVFVGGLAWETQNEAMKDYFDKYGEILEAVIISDKITGRSKGYGFVT 907 +N GQFGDTTLTKVFVGGLAWET EAM+D+F+KYGEILEAVIISDK+TGRSKGYGFVT Sbjct: 4 SNAIGQFGDTTLTKVFVGGLAWETPKEAMRDHFEKYGEILEAVIISDKLTGRSKGYGFVT 63 Query: 906 FKEPESATKACEDPTPVINGRRANCNLASLGARRPRSLSTTSP--QGCNVGPRSTTXXXX 733 FKEPE+A KACED TP+INGRRANCNLASLGARRPRS ++++P QG N G R T+ Sbjct: 64 FKEPEAAKKACEDATPMINGRRANCNLASLGARRPRSAASSTPPHQGSNGGSRPTS---- 119 Query: 732 XXXXANQVQWYYPAGTPTTPFHHQ-PQAIPYHAYGYSPTYITTDIGYNQKLXXXXXXXXX 556 A+ VQWYYPAGTP PFHHQ QA+P+ YGYSP YI DI YN KL Sbjct: 120 -AAPASHVQWYYPAGTPAPPFHHQHHQAVPF--YGYSPAYIAADISYNHKL------SYT 170 Query: 555 XXYVKGGHYSQVYPAQGM------MPVYPVYHFNRPPAMGVAAAPHIYHPYTTAGSVTTI 394 GH+SQVYP Q M MP+YP YHF++ MG A H++ P TT G + T+ Sbjct: 171 GGSYMNGHFSQVYPGQAMVGANALMPMYPFYHFHQSQTMGHPA--HMFPP-TTVGPMPTV 227 Query: 393 PAVISKPPTMAPNAVCLG 340 PA+ISKP +MAPN +G Sbjct: 228 PAIISKPTSMAPNTGAMG 245 >ref|XP_002523906.1| RNA-binding region-containing protein, putative [Ricinus communis] gi|223536836|gb|EEF38475.1| RNA-binding region-containing protein, putative [Ricinus communis] Length = 256 Score = 296 bits (758), Expect = 7e-78 Identities = 158/272 (58%), Positives = 191/272 (70%), Gaps = 18/272 (6%) Frame = -2 Query: 1104 ITMSNHNNIGGQFGDTTLTKVFVGGLAWETQNEAMKDYFDKYGEILEAVIISDKITGRSK 925 +TMSN G FGDTTLTKVFVGGLAWET EAM+++F+KYGEILEAVIISDK+TGRSK Sbjct: 1 MTMSNSV---GPFGDTTLTKVFVGGLAWETPKEAMREHFEKYGEILEAVIISDKLTGRSK 57 Query: 924 GYGFVTFKEPESATKACEDPTPVINGRRANCNLASLGARRPRSLSTTSP----------Q 775 GYGFVTFKEPE+A KACED TP+INGRRANCNLASLGARRPRS + P Q Sbjct: 58 GYGFVTFKEPEAAKKACEDATPMINGRRANCNLASLGARRPRSATQAPPPQPPPPPPPQQ 117 Query: 774 GCNVGPRSTTXXXXXXXXANQVQWYYPAGTPTTPF--HHQPQAIPYHAYGYSPTYITTDI 601 G N G R ++ AN VQWYYPAG+P +P+ HH QA+P+ YGY+PTY+ TDI Sbjct: 118 GSNHGQRPSS-----AAPANHVQWYYPAGSPASPYHHHHHHQAVPF--YGYTPTYVATDI 170 Query: 600 GYNQKLXXXXXXXXXXXYVKGGHYSQVYPAQG------MMPVYPVYHFNRPPAMGVAAAP 439 YN KL GH+SQVYP Q +MP+YP+YHF++ MG+ A Sbjct: 171 SYNHKL------SYTGGSYMNGHFSQVYPGQAIMGANTLMPMYPLYHFHQSQTMGLPA-- 222 Query: 438 HIYHPYTTAGSVTTIPAVISKPPTMAPNAVCL 343 HI+ P TTAG +TT+P ++SKPP++AP+ VCL Sbjct: 223 HIF-PQTTAGPITTVPTIMSKPPSIAPSPVCL 253 >ref|XP_002312040.1| predicted protein [Populus trichocarpa] gi|222851860|gb|EEE89407.1| predicted protein [Populus trichocarpa] Length = 251 Score = 291 bits (745), Expect = 2e-76 Identities = 164/266 (61%), Positives = 192/266 (72%), Gaps = 12/266 (4%) Frame = -2 Query: 1104 ITMSNHNNIGGQFGDTTLTKVFVGGLAWETQNEAMKDYFDKYGEILEAVIISDKITGRSK 925 +TMSN GQFGDTTLTKVFVGGLAWET EA++++F+KYGEILEAVIISDKITGRSK Sbjct: 1 MTMSNGV---GQFGDTTLTKVFVGGLAWETPKEALREHFEKYGEILEAVIISDKITGRSK 57 Query: 924 GYGFVTFKEPESATKACEDPTPVINGRRANCNLASLGARRPRSLSTTSP-QGCNV--GPR 754 GYGFVTFKE +A KACED P+INGRRANCNLASLGARRPRS + P QG N+ GPR Sbjct: 58 GYGFVTFKEAGAANKACEDAAPIINGRRANCNLASLGARRPRSSTPAPPQQGPNIIAGPR 117 Query: 753 STTXXXXXXXXANQVQWYYPAGT-PTTPFHHQ-PQAIPYHAYGYSPTYITTDIGYNQKLX 580 ST AN VQWYYPAG+ +PFHHQ QA+P+ YGYSP YI TDI YN KL Sbjct: 118 ST-----PAPPANHVQWYYPAGSAAASPFHHQHHQAVPF--YGYSPAYIATDISYNHKL- 169 Query: 579 XXXXXXXXXXYVKGGHYSQVYPAQGM------MPVYPVYHFNRPPAMGVAAAPHIYHPYT 418 GH+SQVYP Q M MP+YP+YHF++ A+G+ AA HI+ P Sbjct: 170 -----SYTGGSYMNGHFSQVYPGQAMVGANTLMPMYPLYHFHQSQAVGLPAA-HIFPP-N 222 Query: 417 TAGSVTTIPAVISKPPTMA-PNAVCL 343 TAG +TT+P ++SKPP++A PNAVCL Sbjct: 223 TAGPMTTVPTIMSKPPSIAPPNAVCL 248 >ref|XP_004143608.1| PREDICTED: uncharacterized protein LOC101202850 [Cucumis sativus] Length = 266 Score = 280 bits (716), Expect = 5e-73 Identities = 157/274 (57%), Positives = 185/274 (67%), Gaps = 20/274 (7%) Frame = -2 Query: 1101 TMSNHNNIG---GQFGDTTLTKVFVGGLAWETQNEAMKDYFDKYGEILEAVIISDKITGR 931 T +N+NN G FGDTTLTKVFVGGLAWET EAM+D+F K+GEILEAVIISDK+TGR Sbjct: 6 TTTNNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGR 65 Query: 930 SKGYGFVTFKEPESATKACEDPTPVINGRRANCNLASLGARR--PRSLSTTSPQ----GC 769 SKGYGFVTFK+ ESA KACED P+INGRRANCNLASLGARR RS S T PQ G Sbjct: 66 SKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAPQPGS 125 Query: 768 NV-GPRSTTXXXXXXXXANQVQWYYPAGTPTTPFHHQP-QAIPYHAYGYSPTYITTDIGY 595 N GPR+T+ N VQWYYPAGT TPFHHQP Q +P++ Y SPTYI TDI Y Sbjct: 126 NAGGPRTTS---AATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISY 182 Query: 594 NQKLXXXXXXXXXXXYVKGGHYSQVYPAQGM------MPVYPVYHFNRPPAMGVAAAPHI 433 N KL GHY+Q+YP Q M MP+YP+YH+++ AMG+ A HI Sbjct: 183 NHKL-----------GYMNGHYTQMYPGQAMVGANTLMPMYPLYHYHQSHAMGMPA--HI 229 Query: 432 YHPY-TTAGSVTTIP--AVISKPPTMAPNAVCLG 340 + P TTAG +P +++SKP T+ PN +G Sbjct: 230 FPPSPTTAGPFAAVPPTSIMSKPTTVGPNPGTVG 263