BLASTX nr result

ID: Coptis24_contig00014001 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014001
         (932 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272933.1| PREDICTED: uncharacterized protein At5g43822...   248   2e-63
ref|NP_001065428.1| Os10g0566900 [Oryza sativa Japonica Group] g...   204   3e-50
dbj|BAJ99010.1| predicted protein [Hordeum vulgare subsp. vulgare]    203   5e-50
ref|XP_002306984.1| predicted protein [Populus trichocarpa] gi|2...   203   5e-50
ref|XP_003605502.1| hypothetical protein MTR_4g032370 [Medicago ...   201   2e-49

>ref|XP_002272933.1| PREDICTED: uncharacterized protein At5g43822 [Vitis vinifera]
           gi|297745571|emb|CBI40736.3| unnamed protein product
           [Vitis vinifera]
          Length = 198

 Score =  248 bits (632), Expect = 2e-63
 Identities = 126/198 (63%), Positives = 155/198 (78%), Gaps = 4/198 (2%)
 Frame = +2

Query: 113 MEVLVKKYQQKYRKIRDEMDRWDQLQSRLLLQFGNASSVMERLQVLQEPKKYGVLKSING 292
           ME +VKKYQQK+RK+RDE  RWD+LQSRLL QF NASS++ERLQ +Q  K YG LK I+G
Sbjct: 1   MEGMVKKYQQKFRKVRDETKRWDELQSRLLSQFRNASSIIERLQSIQNSKNYGTLKCIDG 60

Query: 293 IKEEILGKQMMSLEVILHSLKDTMSDFQGIVVSLEKIFRDGRHLANGSSKKVN----ELR 460
           I + +L KQM SLE IL SLK T+ +F GIV+SLEKI RDGR L  G S K+     + R
Sbjct: 61  IGDAVLRKQMESLETILLSLKKTLKEFHGIVLSLEKIVRDGRQLVKGGSVKLTMKQLQQR 120

Query: 461 IGIRPSIADCIEGLKVVYEMHQSEYLLKLSIVSLLTSKIPPPSAGDLGALRQLLIDQPNI 640
           IG++PS+ADC++GL +++EMHQSEYLLK S+VS L++    PSA DLGAL QLL+DQPNI
Sbjct: 121 IGVKPSLADCLDGLSLLHEMHQSEYLLKSSVVSALSTLTLKPSASDLGALHQLLVDQPNI 180

Query: 641 PKEEVRSIFDIILAEEIC 694
           PKEEV+ IFDI+ AEEIC
Sbjct: 181 PKEEVQFIFDIVFAEEIC 198


>ref|NP_001065428.1| Os10g0566900 [Oryza sativa Japonica Group]
           gi|18855001|gb|AAL79693.1|AC087599_12 hypothetical
           protein [Oryza sativa Japonica Group]
           gi|31433571|gb|AAP55069.1| pentatricopeptide, putative,
           expressed [Oryza sativa Japonica Group]
           gi|113639960|dbj|BAF27265.1| Os10g0566900 [Oryza sativa
           Japonica Group] gi|215678750|dbj|BAG95187.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|218185039|gb|EEC67466.1| hypothetical protein
           OsI_34696 [Oryza sativa Indica Group]
           gi|222613293|gb|EEE51425.1| hypothetical protein
           OsJ_32504 [Oryza sativa Japonica Group]
          Length = 194

 Score =  204 bits (518), Expect = 3e-50
 Identities = 103/197 (52%), Positives = 142/197 (72%), Gaps = 3/197 (1%)
 Frame = +2

Query: 113 MEVLVKKYQQKYRKIRDEMDRWDQLQSRLLLQFGNASSVMERLQVLQEPKKYGVLKSING 292
           ME  V++ QQ+ RK R+EMDRWD L SRLL QF NA++++ RL VL+E K YGVL+ +  
Sbjct: 1   MESSVRRVQQRVRKAREEMDRWDDLNSRLLSQFANAAAIVARLPVLEEVKNYGVLRCVPN 60

Query: 293 IKEEILGKQMMSLEVILHSLKDTMSDFQGIVVSLEKIFRDGRHLANGS---SKKVNELRI 463
           I+E +LGKQM SLE+I  S+++T+ +F  I  SL K  RD   +  G    S K  +L++
Sbjct: 61  IRENLLGKQMESLEIIFVSMRETVEEFNSIARSLHKALRDTNQMVRGGSALSAKQMQLQV 120

Query: 464 GIRPSIADCIEGLKVVYEMHQSEYLLKLSIVSLLTSKIPPPSAGDLGALRQLLIDQPNIP 643
           GI P+IADC++GL+ + EMHQ+EY LK S++S LT      S+ D+ A+RQLL+DQPNIP
Sbjct: 121 GILPTIADCLDGLRTLCEMHQAEYALKSSVISSLTW---TSSSSDIAAMRQLLVDQPNIP 177

Query: 644 KEEVRSIFDIILAEEIC 694
           K+EV++IFDII A+EIC
Sbjct: 178 KDEVQAIFDIIFADEIC 194


>dbj|BAJ99010.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 194

 Score =  203 bits (516), Expect = 5e-50
 Identities = 101/197 (51%), Positives = 142/197 (72%), Gaps = 3/197 (1%)
 Frame = +2

Query: 113 MEVLVKKYQQKYRKIRDEMDRWDQLQSRLLLQFGNASSVMERLQVLQEPKKYGVLKSING 292
           ME +V+K QQ+ RK R+E +RWD L SRLL QF NA++++ RL VL + K YGVL+ +  
Sbjct: 1   MEAMVRKVQQRVRKAREETERWDDLNSRLLSQFSNATTIITRLPVLGDAKNYGVLRCVPN 60

Query: 293 IKEEILGKQMMSLEVILHSLKDTMSDFQGIVVSLEKIFRDGRHLANGSS---KKVNELRI 463
           I+E++LGKQM SLE+I   +++T+ +  GI   L K+ RD   +  G S    K  +L++
Sbjct: 61  IREDLLGKQMESLELIFVLMRETLEELNGIAKGLSKVLRDTNQMVRGGSALTAKQLQLKV 120

Query: 464 GIRPSIADCIEGLKVVYEMHQSEYLLKLSIVSLLTSKIPPPSAGDLGALRQLLIDQPNIP 643
           GI P+I DC++GL+ + +MHQ+EY LK SI+SLLT K    S+ D+ A+RQLL+DQPNIP
Sbjct: 121 GILPTITDCLDGLRTLSDMHQAEYALKSSIISLLTWK---SSSSDIAAMRQLLVDQPNIP 177

Query: 644 KEEVRSIFDIILAEEIC 694
           K+EV+SIFDII A+EIC
Sbjct: 178 KDEVQSIFDIIFADEIC 194


>ref|XP_002306984.1| predicted protein [Populus trichocarpa] gi|222856433|gb|EEE93980.1|
           predicted protein [Populus trichocarpa]
          Length = 195

 Score =  203 bits (516), Expect = 5e-50
 Identities = 100/186 (53%), Positives = 144/186 (77%), Gaps = 6/186 (3%)
 Frame = +2

Query: 113 MEVLVKKYQQKYRKIRDEMDRWDQLQSRLLLQFGNASSVMERLQVLQEPKKYGVLKSING 292
           ME LVKKYQQ++RK+R  M+ W+QLQSRL+ QF NAS+++ERL+V+ +   YG LKS++G
Sbjct: 1   MEGLVKKYQQRFRKVRGLMEEWEQLQSRLISQFSNASAIIERLKVIGDCNNYGNLKSVDG 60

Query: 293 IKEEILGKQMMSLEVILHSLKDTMSDFQGIVVSLEKIFRDGRHL--ANGSSKKVN----E 454
           I + ++ KQ+ SL+ IL S+  T+ +F+G+V+++EK++RDGR L    G S ++N     
Sbjct: 61  IVDAVVRKQLESLQTILLSMNKTLEEFRGVVLTIEKMYRDGRQLVKGGGGSNQLNVKQLR 120

Query: 455 LRIGIRPSIADCIEGLKVVYEMHQSEYLLKLSIVSLLTSKIPPPSAGDLGALRQLLIDQP 634
            RIGI+P +ADC++GL +++EMHQ+EYLLK S+VS L++    PS+ DLGAL+QLLIDQP
Sbjct: 121 QRIGIKPCLADCLDGLMILHEMHQAEYLLKSSVVSALSALTLKPSSSDLGALQQLLIDQP 180

Query: 635 NIPKEE 652
           NIPKEE
Sbjct: 181 NIPKEE 186


>ref|XP_003605502.1| hypothetical protein MTR_4g032370 [Medicago truncatula]
           gi|355506557|gb|AES87699.1| hypothetical protein
           MTR_4g032370 [Medicago truncatula]
          Length = 198

 Score =  201 bits (512), Expect = 2e-49
 Identities = 100/198 (50%), Positives = 147/198 (74%), Gaps = 5/198 (2%)
 Frame = +2

Query: 113 MEVLVKKYQQKYRKIRDEMDRWDQLQSRLLLQFGNASSVMERLQVLQEPKKYGVLKSING 292
           ME++VKK+Q K+ K+R+EM++WD+LQSRL+ QF NAS +++RLQVLQ+   YG+L  +  
Sbjct: 1   MEMMVKKFQSKFNKVREEMNQWDELQSRLISQFRNASHIVDRLQVLQKSSNYGILNCVGA 60

Query: 293 IKEEILGKQMMSLEVILHSLKDTMSDFQGIVVSLEKIFRDGRHLANGSSK----KVNELR 460
           + + +L KQ+ SL  I  S++ T+ +F  IV+SLEK+ RDGR L  GSS     K  + R
Sbjct: 61  VSDVLLQKQIDSLNTISFSMRKTLEEFHCIVLSLEKMHRDGRQLVKGSSSRPTMKQLQQR 120

Query: 461 IGIRPSIADCIEGLKVVYEMHQSEYLLKLSIVSLLTS-KIPPPSAGDLGALRQLLIDQPN 637
           +G++P++ DC++GL  ++E++ SEYLLK SIVS L+S  + P +A DLGAL+QLL+DQPN
Sbjct: 121 VGVKPTLIDCLDGLSFLHEIYYSEYLLKTSIVSALSSMALIPSNASDLGALQQLLVDQPN 180

Query: 638 IPKEEVRSIFDIILAEEI 691
           I  EEV+S+FD I AE++
Sbjct: 181 ILTEEVQSLFDTIFAEDL 198


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