BLASTX nr result

ID: Coptis24_contig00014000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014000
         (979 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519856.1| Transmembrane protein 45a, putative [Ricinus...   427   e-117
ref|XP_002303462.1| predicted protein [Populus trichocarpa] gi|2...   423   e-116
ref|XP_002263042.2| PREDICTED: LOW QUALITY PROTEIN: transmembran...   417   e-114
emb|CAN68559.1| hypothetical protein VITISV_028486 [Vitis vinifera]   414   e-113
ref|XP_002326579.1| predicted protein [Populus trichocarpa] gi|2...   412   e-113

>ref|XP_002519856.1| Transmembrane protein 45a, putative [Ricinus communis]
           gi|223540902|gb|EEF42460.1| Transmembrane protein 45a,
           putative [Ricinus communis]
          Length = 278

 Score =  427 bits (1098), Expect = e-117
 Identities = 197/277 (71%), Positives = 235/277 (84%)
 Frame = -1

Query: 916 MGSFKGHVVPGSLFLIIGVWHMWSSVVRYVSNPKSFRVRAWNPVPGFDGKFMYMELYVVA 737
           MGSFKGH +PGSLFL++G+WH+W S+VRYVSNPK+FRVR WNPVPGFDGK  Y+ELY+VA
Sbjct: 1   MGSFKGHALPGSLFLLVGMWHIWCSLVRYVSNPKAFRVRVWNPVPGFDGKLKYLELYLVA 60

Query: 736 IGSFIDLCIELLYSTHLRFFVNGVLNPTHMNNFEHSGMLLMFFIFGVVALLSQKTRYLPL 557
           +G+FIDLCIELLYSTHL+FFV+GVLNP+HMN+FEHSGMLLMFFIFGVV+LLS+KTR+LPL
Sbjct: 61  VGAFIDLCIELLYSTHLKFFVDGVLNPSHMNDFEHSGMLLMFFIFGVVSLLSEKTRFLPL 120

Query: 556 PEGALCLIVASAFCVEYLLFYFHSTAHKGLEGYYHXXXXXXXXXXXISSVTGALFPTSFP 377
           PEGALCL+ A+AFC EYLLFYFHST HKGLEGYYH           +S+V G L PTSFP
Sbjct: 121 PEGALCLVAATAFCAEYLLFYFHSTTHKGLEGYYHLLLVLLIALCILSTVAGTLLPTSFP 180

Query: 376 MDLSCGISITLQGLWFYQTAFTLYGPMMPDGCHLKEDMISCQSTDSEVRGELFANLQLFA 197
           +DLS GI+ITLQGLWFYQTAF+LYGPM+PDGC LK D ++C+S  S+VRGEL AN QLFA
Sbjct: 181 IDLSSGIAITLQGLWFYQTAFSLYGPMVPDGCQLKNDQVTCRSMASQVRGELLANFQLFA 240

Query: 196 LVFGVFFTVGGSYIFASSRYGHSDLKALQTSENGVNR 86
           LV GV   V  SY FA+S+YG SDL++L    +G+++
Sbjct: 241 LVLGVLVGVVVSYGFAASKYGRSDLQSLHVVPDGLDK 277


>ref|XP_002303462.1| predicted protein [Populus trichocarpa] gi|222840894|gb|EEE78441.1|
           predicted protein [Populus trichocarpa]
          Length = 276

 Score =  423 bits (1087), Expect = e-116
 Identities = 199/275 (72%), Positives = 230/275 (83%)
 Frame = -1

Query: 916 MGSFKGHVVPGSLFLIIGVWHMWSSVVRYVSNPKSFRVRAWNPVPGFDGKFMYMELYVVA 737
           MGSF GH +PG+LFL++GVWH+WSS+VRYVSNPKSFRVR WNPVPGFDGK  Y+ELY+VA
Sbjct: 1   MGSFIGHALPGTLFLLVGVWHIWSSLVRYVSNPKSFRVRVWNPVPGFDGKLEYLELYLVA 60

Query: 736 IGSFIDLCIELLYSTHLRFFVNGVLNPTHMNNFEHSGMLLMFFIFGVVALLSQKTRYLPL 557
            G+FID+CIE+LYSTHL+FF+NGVLNP HMN+FEH GMLLMFFIFGVV+LLS+KTR+LPL
Sbjct: 61  GGAFIDMCIEVLYSTHLKFFINGVLNPHHMNDFEHGGMLLMFFIFGVVSLLSEKTRFLPL 120

Query: 556 PEGALCLIVASAFCVEYLLFYFHSTAHKGLEGYYHXXXXXXXXXXXISSVTGALFPTSFP 377
           PEGALCL+ A+AF  EYLLFYFHST HKGLEG+YH           +S   GAL  TSFP
Sbjct: 121 PEGALCLVAAAAFSAEYLLFYFHSTTHKGLEGHYHLLLVLLIGLCVLSVAAGALLRTSFP 180

Query: 376 MDLSCGISITLQGLWFYQTAFTLYGPMMPDGCHLKEDMISCQSTDSEVRGELFANLQLFA 197
           +DLS GI+ITLQGLWFYQTAFTLYGPMMP+GC LK D I C+S+DS VRGEL AN QLF+
Sbjct: 181 VDLSSGIAITLQGLWFYQTAFTLYGPMMPNGCQLKGDQIVCRSSDSLVRGELLANFQLFS 240

Query: 196 LVFGVFFTVGGSYIFASSRYGHSDLKALQTSENGV 92
           LVFGV  TV  SY FA+SRYGHSDLK+L    +G+
Sbjct: 241 LVFGVLVTVAASYGFAASRYGHSDLKSLHVLPDGL 275


>ref|XP_002263042.2| PREDICTED: LOW QUALITY PROTEIN: transmembrane protein 45B-like
           [Vitis vinifera]
          Length = 278

 Score =  417 bits (1072), Expect = e-114
 Identities = 194/277 (70%), Positives = 230/277 (83%)
 Frame = -1

Query: 916 MGSFKGHVVPGSLFLIIGVWHMWSSVVRYVSNPKSFRVRAWNPVPGFDGKFMYMELYVVA 737
           MGSF GHV+PG+LFL +G+WH+WS+VVR+V NPK F+VR WNPV GFDG+  Y+ELYVVA
Sbjct: 1   MGSFMGHVLPGTLFLAVGLWHIWSAVVRFVMNPKGFQVRVWNPVSGFDGRLRYLELYVVA 60

Query: 736 IGSFIDLCIELLYSTHLRFFVNGVLNPTHMNNFEHSGMLLMFFIFGVVALLSQKTRYLPL 557
           IG+FID+CIELLYSTHL+FFVNGVLNP+HMN+FEHSGMLLMFFIFGVVALLSQ+T  +PL
Sbjct: 61  IGAFIDMCIELLYSTHLQFFVNGVLNPSHMNDFEHSGMLLMFFIFGVVALLSQQTGLVPL 120

Query: 556 PEGALCLIVASAFCVEYLLFYFHSTAHKGLEGYYHXXXXXXXXXXXISSVTGALFPTSFP 377
           PEGALCLI A+AF  EY LFYFHST HKGLEGYYH           +S++ GAL PTSFP
Sbjct: 121 PEGALCLIAATAFSAEYFLFYFHSTTHKGLEGYYHLLLVILIGLCILSTIFGALMPTSFP 180

Query: 376 MDLSCGISITLQGLWFYQTAFTLYGPMMPDGCHLKEDMISCQSTDSEVRGELFANLQLFA 197
           +DL CGI+I LQGLWFYQTAFTLYGPMMP+GC LKE+MISC S + +VRGEL AN QLF 
Sbjct: 181 VDLCCGIAIALQGLWFYQTAFTLYGPMMPEGCRLKENMISCHSPEYQVRGELLANFQLFI 240

Query: 196 LVFGVFFTVGGSYIFASSRYGHSDLKALQTSENGVNR 86
           + FGV   V GSY FA+SR+GH DL++L  +E+ ++R
Sbjct: 241 IAFGVLVAVVGSYGFAASRFGHPDLRSLCAAEDELDR 277


>emb|CAN68559.1| hypothetical protein VITISV_028486 [Vitis vinifera]
          Length = 301

 Score =  414 bits (1064), Expect = e-113
 Identities = 192/275 (69%), Positives = 227/275 (82%)
 Frame = -1

Query: 916 MGSFKGHVVPGSLFLIIGVWHMWSSVVRYVSNPKSFRVRAWNPVPGFDGKFMYMELYVVA 737
           MGSF GHV+PG+LFL +G+WH+WS+VVR+V NPK F+VR WNPV GFDG+  Y+ELYVVA
Sbjct: 1   MGSFMGHVLPGTLFLAVGLWHIWSAVVRFVMNPKGFQVRVWNPVSGFDGRLRYLELYVVA 60

Query: 736 IGSFIDLCIELLYSTHLRFFVNGVLNPTHMNNFEHSGMLLMFFIFGVVALLSQKTRYLPL 557
           IG+FID+CIELLYSTHL+FFVNGVLNP+HMN+FEHSGMLLMFFIFGVVALLSQ+T  +PL
Sbjct: 61  IGAFIDMCIELLYSTHLQFFVNGVLNPSHMNDFEHSGMLLMFFIFGVVALLSQQTGLVPL 120

Query: 556 PEGALCLIVASAFCVEYLLFYFHSTAHKGLEGYYHXXXXXXXXXXXISSVTGALFPTSFP 377
           PEGALCLI A+AF  EY LFYFHST HKGLEGYYH           +S++ GAL PTSFP
Sbjct: 121 PEGALCLIAATAFSAEYFLFYFHSTTHKGLEGYYHLLLVILIGLCILSTIFGALMPTSFP 180

Query: 376 MDLSCGISITLQGLWFYQTAFTLYGPMMPDGCHLKEDMISCQSTDSEVRGELFANLQLFA 197
           +DL CGI+I LQGLWFYQTAFTLYGPMMP+GC LKE+MISC S + +VRGEL AN QLF 
Sbjct: 181 VDLCCGIAIALQGLWFYQTAFTLYGPMMPEGCRLKENMISCHSPEYQVRGELLANFQLFI 240

Query: 196 LVFGVFFTVGGSYIFASSRYGHSDLKALQTSENGV 92
           + FGV   V GSY FA+SR+GH DL++L  + + +
Sbjct: 241 IAFGVLVAVVGSYGFAASRFGHPDLRSLSWANHQI 275


>ref|XP_002326579.1| predicted protein [Populus trichocarpa] gi|222833901|gb|EEE72378.1|
           predicted protein [Populus trichocarpa]
          Length = 265

 Score =  412 bits (1058), Expect = e-113
 Identities = 189/265 (71%), Positives = 222/265 (83%)
 Frame = -1

Query: 916 MGSFKGHVVPGSLFLIIGVWHMWSSVVRYVSNPKSFRVRAWNPVPGFDGKFMYMELYVVA 737
           MGSFKGH +PG+LFL++GVWH+WSS+VRY+SNPKSFRVR WNPVPGFDGK  Y+ELY+VA
Sbjct: 1   MGSFKGHALPGTLFLLVGVWHIWSSLVRYLSNPKSFRVRVWNPVPGFDGKLKYLELYLVA 60

Query: 736 IGSFIDLCIELLYSTHLRFFVNGVLNPTHMNNFEHSGMLLMFFIFGVVALLSQKTRYLPL 557
            G+FID+CIELLYSTHL+FFVNGVLNP HMN+FEH GMLLMFFIFG V LLS+KT +LPL
Sbjct: 61  GGAFIDMCIELLYSTHLKFFVNGVLNPHHMNDFEHGGMLLMFFIFGAVGLLSEKTSFLPL 120

Query: 556 PEGALCLIVASAFCVEYLLFYFHSTAHKGLEGYYHXXXXXXXXXXXISSVTGALFPTSFP 377
           PEG LCL+ A+AF  EYLLFYFHST HKGLEG+YH           +S VTGAL PT+FP
Sbjct: 121 PEGVLCLVAAAAFSAEYLLFYFHSTTHKGLEGHYHLLLVLLIGLCVLSIVTGALLPTNFP 180

Query: 376 MDLSCGISITLQGLWFYQTAFTLYGPMMPDGCHLKEDMISCQSTDSEVRGELFANLQLFA 197
           +DLS GI++TLQGLWFYQTAF LYGPMMPDGC LK + I C+S++S++RGEL A  QLF+
Sbjct: 181 VDLSSGIAMTLQGLWFYQTAFCLYGPMMPDGCQLKGNQIMCRSSESQIRGELLATFQLFS 240

Query: 196 LVFGVFFTVGGSYIFASSRYGHSDL 122
           +VFGV   V  +Y FA+SRYGHSDL
Sbjct: 241 MVFGVLVAVAAAYGFAASRYGHSDL 265


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