BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013999
         (1274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635184.1| PREDICTED: transcription factor bHLH123-like...   356   8e-96
ref|XP_002280367.2| PREDICTED: transcription factor bHLH123-like...   345   1e-92
emb|CBI20463.3| unnamed protein product [Vitis vinifera]              345   1e-92
emb|CAN78236.1| hypothetical protein VITISV_016390 [Vitis vinifera]   341   2e-91
ref|XP_002317553.1| predicted protein [Populus trichocarpa] gi|2...   323   6e-86

>ref|XP_003635184.1| PREDICTED: transcription factor bHLH123-like [Vitis vinifera]
            gi|297735889|emb|CBI18658.3| unnamed protein product
            [Vitis vinifera]
          Length = 464

 Score =  356 bits (913), Expect = 8e-96
 Identities = 183/291 (62%), Positives = 217/291 (74%), Gaps = 4/291 (1%)
 Frame = +2

Query: 5    NTGNSGSDACTVTCQGLPTDFSMDSVPYNYQPTFLQGILEPDLHLQQSPYQNRTMNYTSQ 184
            N+ NS  D+ TVTCQG  + F M S  Y Y  T LQG+ +PD   QQ  + NR+MNY+S 
Sbjct: 177  NSINSSGDS-TVTCQGFSSGFPMGSASYGYPSTLLQGLYDPDPQPQQYLFDNRSMNYSSM 235

Query: 185  ANYGVNTNELSHSWQKLPQYMKASPPTQHSSTNNHLHFSNNAPYWNPAAASMST-RPSFL 361
            ANY  + NELS SW K   YMK S P Q    N+HLHF+NN P+WN +AA+++  R SF 
Sbjct: 236  ANYRTSMNELSPSWPKYSPYMKPSLPKQQP--NSHLHFTNNTPFWNASAAALNDIRASFF 293

Query: 362  PSVQNQMFAQTLEEKPNCST-SAKPKSNEVRDSGSAVKKGSSDTAPKRPRVETPSPLPTF 538
            PS Q+Q    T EEKPNCS  + K  + EVRDSGS +KK S++ A KRPR+ETPSPLPTF
Sbjct: 294  PSPQSQFLTPTFEEKPNCSKLTTKLNTEEVRDSGSVLKKSSAEPAFKRPRIETPSPLPTF 353

Query: 539  KVRKEKLGDRVTALQQLVSPFGKTDTASVLYEAIDYIKFLHEQ--VLSAPYMKNGAPVQH 712
            KVRKEKLGDR+TALQQLVSPFGKTDTASVL+EAI+YIKFLH+Q  VLS PYMKNGAP+Q 
Sbjct: 354  KVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSVLSTPYMKNGAPIQP 413

Query: 713  HQNSDKAKGAERPQQDLRSRGLCLVPMSSIFSVTNETSADFWTPTFGGTYR 865
             Q S+K K  E  +QDLRSRGLCLVP+SS F V NET+AD+WTPTFGGT+R
Sbjct: 414  QQTSEKLKDTEGSKQDLRSRGLCLVPISSTFPVANETTADYWTPTFGGTFR 464


>ref|XP_002280367.2| PREDICTED: transcription factor bHLH123-like [Vitis vinifera]
          Length = 361

 Score =  345 bits (886), Expect = 1e-92
 Identities = 177/290 (61%), Positives = 209/290 (72%), Gaps = 4/290 (1%)
 Frame = +2

Query: 8   TGNSGSDACTVTCQGLPTDFSMDSVPYNYQPTFLQGILEPDLHLQQSPYQNRTMNYTSQA 187
           + +S     TVTCQGLPT F +DS  Y    T LQG+L  D    QS ++NR MNY    
Sbjct: 81  SSHSSPGESTVTCQGLPTSFQVDSSVYGSPSTILQGLLGSDHQQNQSSFENRPMNYPYLG 140

Query: 188 NYGVNTNELSHSWQKLPQYMKASPPTQHSSTNNHLHFSNNAPYWNPAAASMS--TRPSFL 361
            YGVN+NE   SW K+PQ+++ SPP Q S T   LHFSNNAP+WN +AA+M+  +RPSF 
Sbjct: 141 TYGVNSNEFLPSWSKVPQFLRTSPPKQPSHTQ--LHFSNNAPFWNASAAAMAADSRPSFS 198

Query: 362 PSVQNQMFAQTLEEKPNCSTSAKPKSNEVRDSGSAVKKGSSDTAPKRPRVETPSPLPTFK 541
           P++Q Q    T  EKP         S+E+RD  S  KK S +T  KRPR ETPSPLP FK
Sbjct: 199 PTLQPQFSTPTFNEKPK-------NSSEIRDISSVAKKSSGETGTKRPRSETPSPLPAFK 251

Query: 542 VRKEKLGDRVTALQQLVSPFGKTDTASVLYEAIDYIKFLHEQV--LSAPYMKNGAPVQHH 715
           VRKEK+GDR+TALQQLVSPFGKTDTASVL EAI+YIKFLHEQV  LS PYMK+GA +QH 
Sbjct: 252 VRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSALSTPYMKSGASIQHQ 311

Query: 716 QNSDKAKGAERPQQDLRSRGLCLVPMSSIFSVTNETSADFWTPTFGGTYR 865
           QNS+K+K  E P+QDLRSRGLCLVP+SS F VT+ETS DFWTPTFGGT+R
Sbjct: 312 QNSEKSKEPEGPRQDLRSRGLCLVPVSSTFPVTHETSVDFWTPTFGGTFR 361


>emb|CBI20463.3| unnamed protein product [Vitis vinifera]
          Length = 384

 Score =  345 bits (886), Expect = 1e-92
 Identities = 177/290 (61%), Positives = 209/290 (72%), Gaps = 4/290 (1%)
 Frame = +2

Query: 8   TGNSGSDACTVTCQGLPTDFSMDSVPYNYQPTFLQGILEPDLHLQQSPYQNRTMNYTSQA 187
           + +S     TVTCQGLPT F +DS  Y    T LQG+L  D    QS ++NR MNY    
Sbjct: 104 SSHSSPGESTVTCQGLPTSFQVDSSVYGSPSTILQGLLGSDHQQNQSSFENRPMNYPYLG 163

Query: 188 NYGVNTNELSHSWQKLPQYMKASPPTQHSSTNNHLHFSNNAPYWNPAAASMS--TRPSFL 361
            YGVN+NE   SW K+PQ+++ SPP Q S T   LHFSNNAP+WN +AA+M+  +RPSF 
Sbjct: 164 TYGVNSNEFLPSWSKVPQFLRTSPPKQPSHTQ--LHFSNNAPFWNASAAAMAADSRPSFS 221

Query: 362 PSVQNQMFAQTLEEKPNCSTSAKPKSNEVRDSGSAVKKGSSDTAPKRPRVETPSPLPTFK 541
           P++Q Q    T  EKP         S+E+RD  S  KK S +T  KRPR ETPSPLP FK
Sbjct: 222 PTLQPQFSTPTFNEKPK-------NSSEIRDISSVAKKSSGETGTKRPRSETPSPLPAFK 274

Query: 542 VRKEKLGDRVTALQQLVSPFGKTDTASVLYEAIDYIKFLHEQV--LSAPYMKNGAPVQHH 715
           VRKEK+GDR+TALQQLVSPFGKTDTASVL EAI+YIKFLHEQV  LS PYMK+GA +QH 
Sbjct: 275 VRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSALSTPYMKSGASIQHQ 334

Query: 716 QNSDKAKGAERPQQDLRSRGLCLVPMSSIFSVTNETSADFWTPTFGGTYR 865
           QNS+K+K  E P+QDLRSRGLCLVP+SS F VT+ETS DFWTPTFGGT+R
Sbjct: 335 QNSEKSKEPEGPRQDLRSRGLCLVPVSSTFPVTHETSVDFWTPTFGGTFR 384


>emb|CAN78236.1| hypothetical protein VITISV_016390 [Vitis vinifera]
          Length = 477

 Score =  341 bits (875), Expect = 2e-91
 Identities = 176/297 (59%), Positives = 210/297 (70%), Gaps = 11/297 (3%)
 Frame = +2

Query: 8    TGNSGSDACTVTCQGLPTDFSMDSVPYNYQPTFLQGILEPDLHLQQSPYQNRTMNYTSQA 187
            + +S     TVTCQGLPT F +DS  Y    T LQG+L  D    QS ++NR MNY    
Sbjct: 178  SSHSSPGESTVTCQGLPTSFQVDSSVYGSPSTILQGLLGSDHQQNQSSFENRPMNYPYLG 237

Query: 188  NYGVNTNELSHSWQKLPQYMKASPPTQHSSTNNHLHFSNNAPYWNPAAASMS--TRPSFL 361
             YGVN+NE   SW K+PQ+++ SPP Q S T   LHFSNNAP+WN +AA+M+  +RPSF 
Sbjct: 238  TYGVNSNEFLPSWSKVPQFLRTSPPKQPSHTQ--LHFSNNAPFWNASAAAMAADSRPSFS 295

Query: 362  PSVQNQMFAQTLEEKPNCSTSA-------KPKSNEVRDSGSAVKKGSSDTAPKRPRVETP 520
            P++Q Q    T  EKP             +  S+E+RD  S  KK S +T  KRPR ETP
Sbjct: 296  PTLQPQFSTPTFNEKPKVLMLISFIYQFFQQNSSEIRDISSVAKKSSGETGTKRPRSETP 355

Query: 521  SPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLYEAIDYIKFLHEQV--LSAPYMKN 694
            SPLP FKVRKEK+GDR+TALQQLVSPFGKTDTASVL EAI+YIKFLHEQV  LS PYMK+
Sbjct: 356  SPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSALSTPYMKS 415

Query: 695  GAPVQHHQNSDKAKGAERPQQDLRSRGLCLVPMSSIFSVTNETSADFWTPTFGGTYR 865
            GA +QH QNS+K+K  E P+QDLRSRGLCLVP+SS F VT+ETS DFWTPTFGGT++
Sbjct: 416  GASIQHQQNSEKSKEPEGPRQDLRSRGLCLVPVSSTFPVTHETSVDFWTPTFGGTFQ 472


>ref|XP_002317553.1| predicted protein [Populus trichocarpa] gi|222860618|gb|EEE98165.1|
            predicted protein [Populus trichocarpa]
          Length = 451

 Score =  323 bits (828), Expect = 6e-86
 Identities = 170/287 (59%), Positives = 206/287 (71%), Gaps = 4/287 (1%)
 Frame = +2

Query: 17   SGSDACTVTCQGLPTDFSMDSVP-YNYQPTFLQGILEPDLHLQQSPYQNRTMNYTSQANY 193
            S SD+ TVT QGL + F MDS   Y    T LQG+L  D  +QQS + NR+M Y   ANY
Sbjct: 175  SSSDS-TVTGQGLQSSFPMDSSGIYGSPSTMLQGLLGSDNQVQQSSFDNRSMGYAYGANY 233

Query: 194  GVNTNELSHSWQKLPQYMKASPPTQHSSTNNHLHFSNNAPYWNPAAASMS-TRPSFLPSV 370
            GV+TNEL  SW K+PQ+++ SPP Q    +N LH SNNAP+WN ++++MS  RPSF PS+
Sbjct: 234  GVSTNELLPSWSKIPQFLRNSPPKQ--PPHNQLHLSNNAPFWNASSSAMSDVRPSFFPSM 291

Query: 371  QNQMFAQTLEEKPNCSTSAKPKSNEVRDSGSAVKKGSSDTAPKRPRVETPSPLPTFKVRK 550
            Q Q      +EKP          +EVRDS +AVKK   +   KRPR ETPSP P FK RK
Sbjct: 292  QPQFTTSNFDEKPK-------NISEVRDSNTAVKKSGGEAGAKRPRNETPSPSPAFKARK 344

Query: 551  EKLGDRVTALQQLVSPFGKTDTASVLYEAIDYIKFLHEQ--VLSAPYMKNGAPVQHHQNS 724
            EK+GDR+TALQQLVSPFGKTDTASVL EAI+YIKFLHEQ  VL  PYMKNGAP+ H Q+S
Sbjct: 345  EKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVLCTPYMKNGAPIHHQQSS 404

Query: 725  DKAKGAERPQQDLRSRGLCLVPMSSIFSVTNETSADFWTPTFGGTYR 865
            +K++ +E  +QDLRS GLCLVP+SS F VT+ET+ DFWTPTFGGT+R
Sbjct: 405  EKSRDSEGQKQDLRSLGLCLVPVSSTFPVTHETTVDFWTPTFGGTFR 451