BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013985
         (2151 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vi...   169   2e-39
gb|ABK92768.1| unknown [Populus trichocarpa]                          164   9e-38
ref|XP_004146726.1| PREDICTED: F-box protein At5g07610-like [Cuc...   164   1e-37
ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|2...   164   1e-37
ref|XP_004171566.1| PREDICTED: F-box protein At5g07610-like [Cuc...   162   3e-37

>ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vinifera]
            gi|296088512|emb|CBI37503.3| unnamed protein product
            [Vitis vinifera]
          Length = 378

 Score =  169 bits (429), Expect = 2e-39
 Identities = 123/395 (31%), Positives = 186/395 (47%), Gaps = 4/395 (1%)
 Frame = -3

Query: 1801 NDDTAIEIFSKLPIEDVPQLKCVCKRWQTLCSSPSFVTSHFQNSPGTISGFFVQGHFYCI 1622
            +DD  +++ S+LP + +  LKCVCKRW+ + S  SF+    Q  P  ++GFF Q   Y  
Sbjct: 3    SDDICMDVLSRLPTKTLLGLKCVCKRWRRIISDRSFIQDLLQR-PEPLAGFFFQER-YQW 60

Query: 1621 CCERYLGLKASEYISVGPEGRDKTSKKMLDFLPEKVSIIASSNGVLLCRNFMRKSVPHNL 1442
            C E    +    YI    EG  +  + +  FLPE V I+ S NG++ CR+      P   
Sbjct: 61   CDE---DISTISYIPATMEGT-QVQQTIFSFLPEDVVILGSCNGLVCCRSVFPSPDPS-- 114

Query: 1441 PWSQKKDDPEKVVLYLCNPFTKEWMTLKPRGKYRTGCCFGLAYDPVGSSMISKGSFFSFQ 1262
                         +++CNP  K+W+ L      +    +GLA++P  S +    +F   +
Sbjct: 115  -------------IFVCNPSNKQWIRLLETTPDKESS-YGLAFNPFQSPIDMPTNFKVVR 160

Query: 1261 VLMVQRPLQLGKDPY-RFLIYSSMTGQWRRSKEVCALSHRLHLHQGCYANGFFYWLTTAH 1085
            V   Q  +    D Y  F IYSS  G W++SKE+C  +H L  ++G +  G  +WLT   
Sbjct: 161  VSQAQTDMD--DDSYFSFEIYSSQAGAWKKSKEICQCNHNLFKNKGIFVGGILHWLTDGD 218

Query: 1084 SVLSFNLKQEISQVIK--LPGHENMGSDGTCLGVSEGKMHYIFFSMVELMVWVLHHEYSV 911
             VLSFN++ E+S +I    P          C+G S G++HYI  S   L VW L  +Y  
Sbjct: 219  QVLSFNIENELSWLISAPFPTIHLTAIPEMCIGESRGRLHYIMISEDGLQVWAL-EDYYD 277

Query: 910  PKWVLKHSKPLFEMPHPSLNDFERIQNWPADCNNHPS-SLMCPYAFQDDVLFMEVRGSLC 734
              W L HS  L  M   +       ++  A   +  S   M P AF+D +L M V   + 
Sbjct: 278  SNWSLVHSTTLEVMEEENSQLLYNTRDRVAQRISIDSIPWMDPLAFKDGLLLMRVSTKII 337

Query: 733  AYDIKTGNMEDVYDYFEELVGFMTPLTVLPYSKSL 629
             Y I T  ME++ +  +     +    V+PYS +L
Sbjct: 338  LYCIGTRKMEELCNLSKLGRNSIFGPLVIPYSLNL 372


>gb|ABK92768.1| unknown [Populus trichocarpa]
          Length = 384

 Score =  164 bits (415), Expect = 9e-38
 Identities = 127/412 (30%), Positives = 201/412 (48%), Gaps = 14/412 (3%)
 Frame = -3

Query: 1795 DTAIEIFSKLPIEDVPQLKCVCKRWQTLCSSPSFVTSHFQNSPGTISGFFVQGHFYCICC 1616
            D   ++ S+L  +D+  LKCV K W+ L S  SF+ +  Q        FF Q H YC   
Sbjct: 10   DIPFDVLSRLQTKDLLGLKCVSKGWKDLISDRSFIQAQSQKKEPLSGFFFQQRHRYCPD- 68

Query: 1615 ERYLGLKASEYISVGPEGRDKTSKKMLDFLPEKVSIIASSNGVLLCRNFMRKSVPHNLPW 1436
                 +K   Y    P  R++  + +  FLP+ V ++A  NG++ CR+          P+
Sbjct: 69   ----DIKTITYF---PVERNRLQQDVFAFLPQDVVVLALCNGLVCCRSCY--------PF 113

Query: 1435 SQKKDDPEKVVLYLCNPFTKEWMTL--KPRGKYRTGCCFGLAYDPVGSSMISKGSFFSFQ 1262
                +DP    +Y+CNP   EW  L  K  GK        LA++P     ++  +F    
Sbjct: 114  ----EDP---AIYVCNPLNSEWWKLDWKEPGKESF---IALAFNPFQDISVNLTNF---- 159

Query: 1261 VLMVQRPLQLGKDP----YRFLIYSSMTGQWRRSKEVCALSHRLHLHQGCYANGFFYWLT 1094
               V RP Q   +     + F IY+S T  W+ SKEVC   + L  ++G ++ G  +WLT
Sbjct: 160  --KVVRPRQFETEQEEAYFSFEIYASRTRNWKLSKEVCWCDNSLSKNEGIFSGGILHWLT 217

Query: 1093 TAHSVLSFNLKQEISQVIK--LPGHENMGSDGTCLGVSEGKMHYIFFSMVELMVWVLHHE 920
                +L+FN++ E++ +I   LP  E       C+G SEG+++Y+  S   L VWVL  +
Sbjct: 218  DGDQILTFNVENELALLISTPLPAGEFNTRPHACIGESEGQLYYVLISEEGLHVWVL-ED 276

Query: 919  YSVPKWVLKHSKPL--FEMPHPS--LNDFERIQNWPADCNNHPSSLMCPYAFQDDVLFME 752
            Y    W LK+SK L   E  H    +N + R+  W    ++ P   M P AF+D VL + 
Sbjct: 277  YFDSTWSLKYSKTLAQIEKEHSDIMINLYNRVMLWQR-IDDRP--WMDPLAFKDGVLVVR 333

Query: 751  VRGSLCAYDIKTGNMEDVYDYFE-ELVGFMTPLTVLPYSKSLLQV-RAKGYP 602
            +  ++  Y + T  ME+V +  +   + +++P+ VLPY+ SL+ + R  G P
Sbjct: 334  ISNTIYLYHVDTSKMEEVGETSKFGAMSWVSPI-VLPYTMSLVPLGRQLGSP 384


>ref|XP_004146726.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 398

 Score =  164 bits (414), Expect = 1e-37
 Identities = 116/399 (29%), Positives = 193/399 (48%), Gaps = 9/399 (2%)
 Frame = -3

Query: 1795 DTAIEIFSKLPIEDVPQLKCVCKRWQTLCSSPSFVTSHFQNSPGTISGFFVQGHFYCICC 1616
            D   ++ S+LP + + +++ V K W  L    SFV + FQ     +SGF  Q  +     
Sbjct: 6    DILFDVLSRLPTKTLLEMRFVSKAWHRLILDRSFVQAQFQKCGLALSGFMFQEKY----- 60

Query: 1615 ERYLGLKASEYISVGPEGRDKTSKKMLDFLPEKVSIIASSNGVLLCRNFMRKSVPHNLPW 1436
             R   +  S +  +  +   K  K +  FLPE V I+ S NG++ CR+  R    H+   
Sbjct: 61   -RKCPIDISTFTYMPIDADSKVQKMVFGFLPEDVVILQSCNGLVCCRSCFRTQ--HSTTH 117

Query: 1435 SQKKDDPEKVVLYLCNPFTKEWMTLKPRGKYRTGCCFGLAYDPVGSSMISKGSFFSFQVL 1256
            S          +Y+CNP  K+W++ +   +  +     LA+DP+   + +  +F   ++ 
Sbjct: 118  S--------TTIYVCNPLFKKWVSFEV-AQLDSFSSIALAFDPILDPVNTATNFKVVRIQ 168

Query: 1255 MVQRPLQLGKDPYRFLIYSSMTGQWRRSKEVCALSHRLHLHQGCYANGFFYWLTTAHSVL 1076
             ++   +  +  Y F IYSS TG W+ S EVC     L  + G YA G  +WLT    +L
Sbjct: 169  QLENEQE--EMYYTFEIYSSETGTWKESSEVCYSDGNLLNNNGTYAKGVLHWLTDTDQIL 226

Query: 1075 SFNLKQEISQVI--KLPGHEN-MGSDGTCLGVSEGKMHYIFFSMVELMVWVLHHEYSVPK 905
            +F+ ++E+S ++   +P  E  + + GTC+G S+G +H+I      ++VW L  +Y   K
Sbjct: 227  AFDTEKELSLLVPSPIPALEMFIDAPGTCIGESKGLLHFIMICEDGIIVWCL-DDYFEAK 285

Query: 904  WVLKHSKPLFEMPHPSLNDFERI------QNWPADCNNHPSSLMCPYAFQDDVLFMEVRG 743
            W LKHSK L  +   + N F ++      +  P          M P+AF+D+VL M V  
Sbjct: 286  WTLKHSKQLQMIEDENPNMFFKLYKIMQRRRLPG-----MEPYMDPWAFKDEVLLMRVFS 340

Query: 742  SLCAYDIKTGNMEDVYDYFEELVGFMTPLTVLPYSKSLL 626
            ++  Y I+TG + +V +             V+PYS SL+
Sbjct: 341  TVYFYHIETGKVVEVCNVASLGPNPFVSPPVIPYSLSLI 379


>ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|222870635|gb|EEF07766.1|
            predicted protein [Populus trichocarpa]
          Length = 424

 Score =  164 bits (414), Expect = 1e-37
 Identities = 124/403 (30%), Positives = 197/403 (48%), Gaps = 13/403 (3%)
 Frame = -3

Query: 1795 DTAIEIFSKLPIEDVPQLKCVCKRWQTLCSSPSFVTSHFQNSPGTISGFFVQGHFYCICC 1616
            D   ++ S+L  +D+  LKCV K W+ L S  SF+ +  Q        FF Q H YC   
Sbjct: 10   DIPFDVLSRLQTKDLLGLKCVSKGWKDLISDRSFIQAQSQKKEPLSGFFFQQRHRYCPD- 68

Query: 1615 ERYLGLKASEYISVGPEGRDKTSKKMLDFLPEKVSIIASSNGVLLCRNFMRKSVPHNLPW 1436
                 +K   Y    P  R++  + +  FLP+ V ++A  NG++ CR+          P+
Sbjct: 69   ----DIKTITYF---PVERNRLQQDVFAFLPQDVVVLALCNGLVCCRSCY--------PF 113

Query: 1435 SQKKDDPEKVVLYLCNPFTKEWMTL--KPRGKYRTGCCFGLAYDPVGSSMISKGSFFSFQ 1262
                +DP    +Y+CNP   EW  L  K  GK        LA++P     ++  +F    
Sbjct: 114  ----EDP---AIYVCNPLNSEWWKLDWKEPGKESF---IALAFNPFQDISVNLTNF---- 159

Query: 1261 VLMVQRPLQLGKDP----YRFLIYSSMTGQWRRSKEVCALSHRLHLHQGCYANGFFYWLT 1094
               V RP Q   +     + F IY+S T  W+ SKEVC   + L  ++G ++ G  +WLT
Sbjct: 160  --KVVRPRQFETEQEEAYFSFEIYASRTRNWKLSKEVCWCDNSLSKNEGIFSGGILHWLT 217

Query: 1093 TAHSVLSFNLKQEISQVIK--LPGHENMGSDGTCLGVSEGKMHYIFFSMVELMVWVLHHE 920
                +L+FN++ E++ +I   LP  E       C+G SEG+++Y+  S   L VWVL  +
Sbjct: 218  DGDQILTFNVENELALLISTPLPAGEFNTRPHACIGESEGQLYYVLISEEGLHVWVL-ED 276

Query: 919  YSVPKWVLKHSKPL--FEMPHPS--LNDFERIQNWPADCNNHPSSLMCPYAFQDDVLFME 752
            Y    W LK+SK L   E  H    +N + R+  W    ++ P   M P AF+D VL + 
Sbjct: 277  YFDSTWSLKYSKTLAQIEKEHSDIMINLYNRVMLWQR-IDDRP--WMDPLAFKDGVLVVR 333

Query: 751  VRGSLCAYDIKTGNMEDVYDYFE-ELVGFMTPLTVLPYSKSLL 626
            +  ++  Y + T  ME+V +  +   + +++P+ VLPY+ SL+
Sbjct: 334  ISNTIYLYHVDTSKMEEVGETSKFGAMSWVSPI-VLPYTMSLV 375


>ref|XP_004171566.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 399

 Score =  162 bits (410), Expect = 3e-37
 Identities = 114/394 (28%), Positives = 190/394 (48%), Gaps = 4/394 (1%)
 Frame = -3

Query: 1795 DTAIEIFSKLPIEDVPQLKCVCKRWQTLCSSPSFVTSHFQNSPGTISGFFVQGHFYCICC 1616
            D   ++ S+LP + + +++ V K W  L    SFV + FQ     +SGF  Q  +     
Sbjct: 6    DILFDVLSRLPTKTLLEMRFVSKAWHRLILDRSFVQAQFQKCGLALSGFMFQEKY----- 60

Query: 1615 ERYLGLKASEYISVGPEGRDKTSKKMLDFLPEKVSIIASSNGVLLCRNFMRKSVPHNLPW 1436
             R   +  S +  +  +   K  K +  FLPE V I+ S NG++ CR+  R    H+   
Sbjct: 61   -RKCPIDISTFTYMPIDADSKVQKMVFGFLPEDVVILQSCNGLVCCRSCFRTQ--HSTTH 117

Query: 1435 SQKKDDPEKVVLYLCNPFTKEWMTLKPRGKYRTGCCFGLAYDPVGSSMISKGSFFSFQVL 1256
            S          +Y+CNP  K+W++ +   +  +     LA+DP+   + +  +F   ++ 
Sbjct: 118  S--------TTIYVCNPLFKKWVSFEV-AQLDSFSSIALAFDPILDPVNTATNFKVVRIQ 168

Query: 1255 MVQRPLQLGKDPYRFLIYSSMTGQWRRSKEVCALSHRLHLHQGCYANGFFYWLTTAHSVL 1076
             ++   +  +  Y F IYSS TG W+ S EVC     L  + G YA G  +WLT    +L
Sbjct: 169  QLENEQE--EMYYTFEIYSSETGTWKESSEVCYSDGNLLKNNGTYAKGVLHWLTDTDQIL 226

Query: 1075 SFNLKQEISQVI--KLPGHEN-MGSDGTCLGVSEGKMHYIFFSMVELMVWVLHHEYSVPK 905
            +F+ ++E+S ++   +P  E  + + GTC+G S+G +H+I      ++VW L  +Y   K
Sbjct: 227  AFDTEKELSLLVPSPIPALEMFIDAPGTCIGESKGLLHFIMICEDGIIVWCL-DDYFEAK 285

Query: 904  WVLKHSKPLFEMPHPSLNDFERIQN-WPADCNNHPSSLMCPYAFQDDVLFMEVRGSLCAY 728
            W LKHSK L  +   + N F ++               M P+AF+D+VL M V  ++  Y
Sbjct: 286  WTLKHSKQLQMIEDENPNMFFKLYKIMQRKRLPGMEPYMDPWAFKDEVLLMRVFSTVYFY 345

Query: 727  DIKTGNMEDVYDYFEELVGFMTPLTVLPYSKSLL 626
              +TG + +V +             V+PYS SL+
Sbjct: 346  HTETGKVVEVCNVASLGPNPFVSPPVIPYSLSLI 379