BLASTX nr result

ID: Coptis24_contig00013981 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013981
         (722 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF04377.1|AF188678_1 P72 DEAD box protein [Pisum sativum]          57   5e-06
ref|NP_196965.2| DEAD-box ATP-dependent RNA helicase 46 [Arabido...    57   5e-06
ref|XP_002871624.1| ATP binding protein [Arabidopsis lyrata subs...    57   5e-06
ref|NP_001190309.1| DEAD-box ATP-dependent RNA helicase 46 [Arab...    57   5e-06
dbj|BAF00715.1| DRH1 DEAD box protein - like [Arabidopsis thaliana]    57   5e-06

>gb|AAF04377.1|AF188678_1 P72 DEAD box protein [Pisum sativum]
          Length = 716

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = +3

Query: 45  YTFFCDKDAKHASDLIKILEGANQKVPP 128
           YTFF D+DAKHASDLIKILEGANQKVPP
Sbjct: 497 YTFFGDQDAKHASDLIKILEGANQKVPP 524


>ref|NP_196965.2| DEAD-box ATP-dependent RNA helicase 46 [Arabidopsis thaliana]
           gi|332004671|gb|AED92054.1| DEAD-box ATP-dependent RNA
           helicase 46 [Arabidopsis thaliana]
          Length = 712

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = +3

Query: 45  YTFFCDKDAKHASDLIKILEGANQKVPP 128
           YTFF D+DAKHASDLIKILEGANQKVPP
Sbjct: 574 YTFFGDQDAKHASDLIKILEGANQKVPP 601


>ref|XP_002871624.1| ATP binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297317461|gb|EFH47883.1| ATP binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 713

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = +3

Query: 45  YTFFCDKDAKHASDLIKILEGANQKVPP 128
           YTFF D+DAKHASDLIKILEGANQKVPP
Sbjct: 574 YTFFGDQDAKHASDLIKILEGANQKVPP 601


>ref|NP_001190309.1| DEAD-box ATP-dependent RNA helicase 46 [Arabidopsis thaliana]
           gi|114153757|sp|Q9LYJ9.2|RH46_ARATH RecName:
           Full=DEAD-box ATP-dependent RNA helicase 46
           gi|332004672|gb|AED92055.1| DEAD-box ATP-dependent RNA
           helicase 46 [Arabidopsis thaliana]
          Length = 645

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = +3

Query: 45  YTFFCDKDAKHASDLIKILEGANQKVPP 128
           YTFF D+DAKHASDLIKILEGANQKVPP
Sbjct: 506 YTFFGDQDAKHASDLIKILEGANQKVPP 533


>dbj|BAF00715.1| DRH1 DEAD box protein - like [Arabidopsis thaliana]
          Length = 450

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = +3

Query: 45  YTFFCDKDAKHASDLIKILEGANQKVPP 128
           YTFF D+DAKHASDLIKILEGANQKVPP
Sbjct: 311 YTFFGDQDAKHASDLIKILEGANQKVPP 338


Top