BLASTX nr result
ID: Coptis24_contig00013979
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00013979
(1654 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI38228.3| unnamed protein product [Vitis vinifera] 431 e-118
ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g... 431 e-118
emb|CAN69138.1| hypothetical protein VITISV_022038 [Vitis vinifera] 431 e-118
ref|XP_003541782.1| PREDICTED: poly(rC)-binding protein 3-like [... 364 4e-98
ref|XP_003547100.1| PREDICTED: KH domain-containing protein At4g... 363 6e-98
>emb|CBI38228.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 431 bits (1108), Expect = e-118
Identities = 231/428 (53%), Positives = 289/428 (67%), Gaps = 2/428 (0%)
Frame = +1
Query: 10 YTSRNRPLPTEVDRISALDAQR-QQEIVFKLLCSNDSXXXXXXXXXXXXRALQDETGATI 186
Y S +RPL +RIS LD + QQE++FK+LCSND +ALQ+E GA+I
Sbjct: 210 YASGSRPLSINTERISTLDPKTSQQEVIFKILCSNDRVGGVIGKGGTIVKALQNEAGASI 269
Query: 187 SVGSSVSEADERVVTVSAKENPESRYSPAQNAVVRVFTRSVEVGIEKGLDA-SKGASVSA 363
SVG+ V+E DER++T++A ENPESRYSPAQN V+ VF RS+E GIEKGLD+ SKG+ VSA
Sbjct: 270 SVGAPVAECDERLITITASENPESRYSPAQNGVILVFNRSIEAGIEKGLDSGSKGSPVSA 329
Query: 364 RLLVPPNQVGCLMGKGGTIIQEMRKLTNTAIRIIGGDKVSKSNSENDQVVQIVGDLRNVQ 543
RL+VP NQVGCLMGKGGTII EMRK + IRIIG D+V K SENDQVVQI G+ NVQ
Sbjct: 330 RLVVPSNQVGCLMGKGGTIISEMRKASGAGIRIIGSDQVPKCASENDQVVQISGEFVNVQ 389
Query: 544 NAVFHVTGRLRDNLFPNKTMNGAGAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 723
+ ++H+TGRLRDNLFP+KT+NGAG
Sbjct: 390 DGLYHITGRLRDNLFPSKTLNGAG------------------------------------ 413
Query: 724 XXXXXXXXXXXXXXXIYSSSTIHESSPYGRLREQTSPALYPSLGLHRNIDRQTMLAHGID 903
I SSS ++E SPYGR+R+ S L+ S+G+ + R T L +D
Sbjct: 414 ---------------IRSSSAMNEISPYGRVRDPASFGLHSSVGVSPSFSRHTTLTQSMD 458
Query: 904 HLGLSHSLDHSRSPQLWTSQTIGGGNSRGMTDSGRGLTSLRGSLDFGSGGKTAIVTNTTV 1083
HLGLSHSLDH SP+LW SQT+ G N R +++G ++ GSG K+AI+TNTTV
Sbjct: 459 HLGLSHSLDHPTSPRLWPSQTVTGVNPR----------NIKGGIELGSGSKSAIITNTTV 508
Query: 1084 EILVPEQVLGSVYGENGTNLNRLRQISGAKVSIHDPRPGTSETIVVISGTPDQTQAAQSL 1263
EI++PE V+GSVYGENG NL RLR+ISGAKV++H+PRPGTS+ IV+ISGTPD+TQAAQSL
Sbjct: 509 EIVIPENVIGSVYGENGNNLARLRKISGAKVTLHEPRPGTSDRIVIISGTPDETQAAQSL 568
Query: 1264 LQAFILSG 1287
LQAFI +G
Sbjct: 569 LQAFIHTG 576
>ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 648
Score = 431 bits (1108), Expect = e-118
Identities = 231/428 (53%), Positives = 289/428 (67%), Gaps = 2/428 (0%)
Frame = +1
Query: 10 YTSRNRPLPTEVDRISALDAQR-QQEIVFKLLCSNDSXXXXXXXXXXXXRALQDETGATI 186
Y S +RPL +RIS LD + QQE++FK+LCSND +ALQ+E GA+I
Sbjct: 273 YASGSRPLSINTERISTLDPKTSQQEVIFKILCSNDRVGGVIGKGGTIVKALQNEAGASI 332
Query: 187 SVGSSVSEADERVVTVSAKENPESRYSPAQNAVVRVFTRSVEVGIEKGLDA-SKGASVSA 363
SVG+ V+E DER++T++A ENPESRYSPAQN V+ VF RS+E GIEKGLD+ SKG+ VSA
Sbjct: 333 SVGAPVAECDERLITITASENPESRYSPAQNGVILVFNRSIEAGIEKGLDSGSKGSPVSA 392
Query: 364 RLLVPPNQVGCLMGKGGTIIQEMRKLTNTAIRIIGGDKVSKSNSENDQVVQIVGDLRNVQ 543
RL+VP NQVGCLMGKGGTII EMRK + IRIIG D+V K SENDQVVQI G+ NVQ
Sbjct: 393 RLVVPSNQVGCLMGKGGTIISEMRKASGAGIRIIGSDQVPKCASENDQVVQISGEFVNVQ 452
Query: 544 NAVFHVTGRLRDNLFPNKTMNGAGAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 723
+ ++H+TGRLRDNLFP+KT+NGAG
Sbjct: 453 DGLYHITGRLRDNLFPSKTLNGAG------------------------------------ 476
Query: 724 XXXXXXXXXXXXXXXIYSSSTIHESSPYGRLREQTSPALYPSLGLHRNIDRQTMLAHGID 903
I SSS ++E SPYGR+R+ S L+ S+G+ + R T L +D
Sbjct: 477 ---------------IRSSSAMNEISPYGRVRDPASFGLHSSVGVSPSFSRHTTLTQSMD 521
Query: 904 HLGLSHSLDHSRSPQLWTSQTIGGGNSRGMTDSGRGLTSLRGSLDFGSGGKTAIVTNTTV 1083
HLGLSHSLDH SP+LW SQT+ G N R +++G ++ GSG K+AI+TNTTV
Sbjct: 522 HLGLSHSLDHPTSPRLWPSQTVTGVNPR----------NIKGGIELGSGSKSAIITNTTV 571
Query: 1084 EILVPEQVLGSVYGENGTNLNRLRQISGAKVSIHDPRPGTSETIVVISGTPDQTQAAQSL 1263
EI++PE V+GSVYGENG NL RLR+ISGAKV++H+PRPGTS+ IV+ISGTPD+TQAAQSL
Sbjct: 572 EIVIPENVIGSVYGENGNNLARLRKISGAKVTLHEPRPGTSDRIVIISGTPDETQAAQSL 631
Query: 1264 LQAFILSG 1287
LQAFI +G
Sbjct: 632 LQAFIHTG 639
Score = 89.7 bits (221), Expect = 2e-15
Identities = 61/189 (32%), Positives = 99/189 (52%), Gaps = 14/189 (7%)
Frame = +1
Query: 85 IVFKLLCSNDSXXXXXXXXXXXXRALQDETGATISVGSSVSEADERVVTVSAKENPESRY 264
+ F+LLC + LQ +TGA I V S S +D RV+ V A + R
Sbjct: 51 VAFRLLCHASRIGGVIGKSGVIVKQLQSDTGARIRVEDSPSTSDHRVILVIAPASVNRRI 110
Query: 265 -----------SPAQNAVVRVFTRSVEVG-IEKGLDASKGASVSARLLVPPNQVGCLMGK 408
S AQ AV+RVF R +EV + G+ G VS RLL +QVG ++GK
Sbjct: 111 ALQGSSEEVEASAAQEAVLRVFERILEVAAVVDGVPP--GGVVSCRLLAETSQVGSVIGK 168
Query: 409 GGTIIQEMRKLTNTAIRIIGGDKVSKSNSENDQVVQIVGDLRNVQNAVFHVTGRLRD--N 582
GG +++++R+ + + I+++ +K+ + D++V+I GD+ V+ A+ V+ RL+D N
Sbjct: 169 GGKVVEKIRRESGSKIKVLTAEKLPTCAASTDEMVEIEGDVLAVKKALVAVSRRLQDCPN 228
Query: 583 LFPNKTMNG 609
+ K + G
Sbjct: 229 VDKTKLIGG 237
>emb|CAN69138.1| hypothetical protein VITISV_022038 [Vitis vinifera]
Length = 569
Score = 431 bits (1108), Expect = e-118
Identities = 231/428 (53%), Positives = 289/428 (67%), Gaps = 2/428 (0%)
Frame = +1
Query: 10 YTSRNRPLPTEVDRISALDAQR-QQEIVFKLLCSNDSXXXXXXXXXXXXRALQDETGATI 186
Y S +RPL +RIS LD + QQE++FK+LCSND +ALQ+E GA+I
Sbjct: 194 YASGSRPLSINTERISTLDPKTSQQEVIFKILCSNDRVGGVIGKGGTIVKALQNEAGASI 253
Query: 187 SVGSSVSEADERVVTVSAKENPESRYSPAQNAVVRVFTRSVEVGIEKGLDA-SKGASVSA 363
SVG+ V+E DER++T++A ENPESRYSPAQN V+ VF RS+E GIEKGLD+ SKG+ VSA
Sbjct: 254 SVGAPVAECDERLITITASENPESRYSPAQNGVILVFNRSIEAGIEKGLDSGSKGSPVSA 313
Query: 364 RLLVPPNQVGCLMGKGGTIIQEMRKLTNTAIRIIGGDKVSKSNSENDQVVQIVGDLRNVQ 543
RL+VP NQVGCLMGKGGTII EMRK + IRIIG D+V K SENDQVVQI G+ NVQ
Sbjct: 314 RLVVPSNQVGCLMGKGGTIISEMRKASGAGIRIIGSDQVPKCASENDQVVQISGEFVNVQ 373
Query: 544 NAVFHVTGRLRDNLFPNKTMNGAGAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 723
+ ++H+TGRLRDNLFP+KT+NGAG
Sbjct: 374 DGLYHITGRLRDNLFPSKTLNGAG------------------------------------ 397
Query: 724 XXXXXXXXXXXXXXXIYSSSTIHESSPYGRLREQTSPALYPSLGLHRNIDRQTMLAHGID 903
I SSS ++E SPYGR+R+ S L+ S+G+ + R T L +D
Sbjct: 398 ---------------IRSSSAMNEISPYGRVRDPASFGLHSSVGVSPSFSRHTTLTQSMD 442
Query: 904 HLGLSHSLDHSRSPQLWTSQTIGGGNSRGMTDSGRGLTSLRGSLDFGSGGKTAIVTNTTV 1083
HLGLSHSLDH SP+LW SQT+ G N R +++G ++ GSG K+AI+TNTTV
Sbjct: 443 HLGLSHSLDHPTSPRLWPSQTVTGVNPR----------NIKGGIELGSGSKSAIITNTTV 492
Query: 1084 EILVPEQVLGSVYGENGTNLNRLRQISGAKVSIHDPRPGTSETIVVISGTPDQTQAAQSL 1263
EI++PE V+GSVYGENG NL RLR+ISGAKV++H+PRPGTS+ IV+ISGTPD+TQAAQSL
Sbjct: 493 EIVIPENVIGSVYGENGNNLARLRKISGAKVTLHEPRPGTSDRIVIISGTPDETQAAQSL 552
Query: 1264 LQAFILSG 1287
LQAFI +G
Sbjct: 553 LQAFIHTG 560
>ref|XP_003541782.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 663
Score = 364 bits (934), Expect = 4e-98
Identities = 212/430 (49%), Positives = 270/430 (62%), Gaps = 4/430 (0%)
Frame = +1
Query: 10 YTSRNRPLPTEVDRISALDAQR-QQEIVFKLLCSNDSXXXXXXXXXXXXRALQDETGATI 186
Y +R L EV+R+S+L+ + QQE+ F++LCSND RALQ ETGATI
Sbjct: 285 YATRVHSLSAEVNRVSSLEPKALQQEVSFRILCSNDRVGGVIGKGGNIVRALQSETGATI 344
Query: 187 SVGSSVSEADERVVTVSAKENPESRYSPAQNAVVRVFTRSVEVGIEKGLDA--SKGASVS 360
S+G V+E ++R++T++A ENPESRYSPAQ A V VF+RS+EVG EK LD+ +KG++V+
Sbjct: 345 SIGPLVAECEDRLITIAASENPESRYSPAQKAAVLVFSRSIEVGFEKELDSGLNKGSTVT 404
Query: 361 ARLLVPPNQVGCLMGKGGTIIQEMRKLTNTAIRIIGGDKVSKSNSENDQVVQIVGDLRNV 540
RL+VP +QVGCL+GKGG I+ E+RK T IRIIG D+V K S+NDQVVQI G+ +V
Sbjct: 405 VRLVVPSSQVGCLIGKGGVIVSEIRKATGANIRIIGTDQVPKCASDNDQVVQISGEFSSV 464
Query: 541 QNAVFHVTGRLRDNLFPNKTMNGAGAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 720
Q+A+++ TGRLRDNLF + T N AG +
Sbjct: 465 QDALYNATGRLRDNLFVS-TQNSAGTRSL------------------------------- 492
Query: 721 XXXXXXXXXXXXXXXXIYSSSTIHESSPYGRLREQTSPALYPSLGLHRNIDRQTMLAHGI 900
SS ++SPYG ++ + R T A GI
Sbjct: 493 -------------------SSLRVDTSPYGIQQDFVPHGSQLPATTSHCLSRHT-FAQGI 532
Query: 901 DHLGLSHSLDHSRSPQLWT-SQTIGGGNSRGMTDSGRGLTSLRGSLDFGSGGKTAIVTNT 1077
DHLGLS +LDH SP LWT + + G NSR + D GLTS +G L+ SG K+AIVTNT
Sbjct: 533 DHLGLSRNLDHPSSPGLWTRNLDLAGINSRSINDFSLGLTSRKGGLELVSGSKSAIVTNT 592
Query: 1078 TVEILVPEQVLGSVYGENGTNLNRLRQISGAKVSIHDPRPGTSETIVVISGTPDQTQAAQ 1257
TVEI+VP+ + VYGENG NL RLRQISGAKV IH+PRPGTS+ I+VISGTPD+TQAAQ
Sbjct: 593 TVEIVVPDDTIDCVYGENGRNLVRLRQISGAKVVIHEPRPGTSDRIIVISGTPDETQAAQ 652
Query: 1258 SLLQAFILSG 1287
SLLQAFILSG
Sbjct: 653 SLLQAFILSG 662
Score = 76.3 bits (186), Expect = 2e-11
Identities = 51/176 (28%), Positives = 90/176 (51%), Gaps = 11/176 (6%)
Frame = +1
Query: 85 IVFKLLCSNDSXXXXXXXXXXXXRALQDETGATISVGSSVSEADERVVTVSA-------- 240
+ F+LLC+ + LQ TGA I + + E+ +RV+ V A
Sbjct: 45 VAFRLLCNASRIGGVIGKSGSVIKTLQQSTGAKIRIEDAPQESPDRVILVIADAALSCKV 104
Query: 241 --KENPESRYSPAQNAVVRVFTRSVEVGIE-KGLDASKGASVSARLLVPPNQVGCLMGKG 411
+ S AQ A+++VF R +EV E +G+D +S RL+ Q G ++GKG
Sbjct: 105 LLRNEEVVEVSKAQEALLKVFDRILEVAAEMEGVDVGDRV-MSCRLVADSAQAGSVIGKG 163
Query: 412 GTIIQEMRKLTNTAIRIIGGDKVSKSNSENDQVVQIVGDLRNVQNAVFHVTGRLRD 579
G +++ ++K T IR++ D + S +D++++I G + +V+ A+ V+ RL+D
Sbjct: 164 GKVVERIKKETGCKIRVL-TDDLPLCASASDEMIEIEGRVSSVKKALVAVSQRLQD 218
>ref|XP_003547100.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max]
Length = 710
Score = 363 bits (933), Expect = 6e-98
Identities = 219/475 (46%), Positives = 275/475 (57%), Gaps = 49/475 (10%)
Frame = +1
Query: 10 YTSRNRPLPTEVDRISALDAQR-QQEIVFKLLCSNDSXXXXXXXXXXXXRALQDETGATI 186
Y +R LPTEV+R+S+L+ + +QE+ F++LCSND RALQ ETGATI
Sbjct: 293 YATRIHSLPTEVNRVSSLEPKALKQEVTFRILCSNDRVGGVIGKGGNIVRALQSETGATI 352
Query: 187 SVGSSVSEADERVVTVSAKENPESRYSPAQNAVVRVFTRSVEVGIEKGLDA--SKGASVS 360
S+G +V+E ++R++T++A ENPESRYSPAQ A V VF+RS+EVG EKGLD+ +KG+ V+
Sbjct: 353 SIGPAVAECEDRLITIAASENPESRYSPAQKAAVLVFSRSIEVGFEKGLDSGLNKGSIVT 412
Query: 361 ARLLVPPNQVGCLMGKGGTIIQEMRKLTNTAIRIIGGDKVSKSNSENDQVVQIVGDLRNV 540
RL+VP +QVGCL+GKGG I+ EMRK T IRIIG D+V K S+NDQVVQI G+ +V
Sbjct: 413 VRLVVPSSQVGCLIGKGGVIVSEMRKATGANIRIIGTDQVPKCASDNDQVVQISGEFSSV 472
Query: 541 QNAVFHVTGRLRDNLFPNKTMNGAGAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 720
Q+A+++ GRLRDNLF + T N AG +
Sbjct: 473 QDALYNAMGRLRDNLFVS-TQNSAGTRSL------------------------------- 500
Query: 721 XXXXXXXXXXXXXXXXIYSSSTIHESSPYGR------LREQTSPALYPSLGLHRNIDRQT 882
SS ++SPYGR L Q PA SL H
Sbjct: 501 -------------------SSLRVDTSPYGRQQDVVPLGSQLPPATSHSLSRH------- 534
Query: 883 MLAHGIDHLGLSHSLDHSRSPQLWTSQ--------------------------------- 963
A GIDHLGLS +LDH SP LWT
Sbjct: 535 TFAQGIDHLGLSRNLDHPSSPGLWTRNLDRPSSPGLWTRNLDRPSSPGLWTRNLDHRPSS 594
Query: 964 -------TIGGGNSRGMTDSGRGLTSLRGSLDFGSGGKTAIVTNTTVEILVPEQVLGSVY 1122
T+ G NSRG+ D GLTS +G L+ SG K+AIVTNT VEI+VP+ + VY
Sbjct: 595 PGLWAPPTVAGINSRGINDFSLGLTSRKGGLELVSGSKSAIVTNTIVEIVVPDDTIDCVY 654
Query: 1123 GENGTNLNRLRQISGAKVSIHDPRPGTSETIVVISGTPDQTQAAQSLLQAFILSG 1287
GENG+NL RLRQISGA V +H+PRPGTS+ I+VISGTPD+TQAAQSLLQAFILSG
Sbjct: 655 GENGSNLARLRQISGANVVVHEPRPGTSDRIIVISGTPDETQAAQSLLQAFILSG 709
Score = 69.7 bits (169), Expect = 2e-09
Identities = 47/176 (26%), Positives = 87/176 (49%), Gaps = 11/176 (6%)
Frame = +1
Query: 85 IVFKLLCSNDSXXXXXXXXXXXXRALQDETGATISVGSSVSEADERVVTVSA-------- 240
+ F+LLC+ + LQ TGA I + + E +R++ V A
Sbjct: 45 VAFRLLCNASRIGGVIGKSGSVIKTLQQSTGAKIRIEDAPQELPDRIILVIADAALSGKI 104
Query: 241 --KENPESRYSPAQNAVVRVFTRSVEVGI-EKGLDASKGASVSARLLVPPNQVGCLMGKG 411
+ S AQ A+++VF R + G ++ +D +S RL+ Q G ++GKG
Sbjct: 105 LLRNEEVIEVSKAQEALLKVFDRILRSGGGDRSVDVGDRV-MSCRLVADAAQAGSVIGKG 163
Query: 412 GTIIQEMRKLTNTAIRIIGGDKVSKSNSENDQVVQIVGDLRNVQNAVFHVTGRLRD 579
G +++ ++K T IR++ D + S +D++++I G + +V+ A+ V+ RL+D
Sbjct: 164 GKVVERIKKETGCKIRVL-TDDLPLCASASDEIIEIEGRVSSVKKALVAVSQRLQD 218