BLASTX nr result

ID: Coptis24_contig00013963 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013963
         (1037 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297894.1| predicted protein [Populus trichocarpa] gi|2...   284   2e-74
ref|XP_002512701.1| conserved hypothetical protein [Ricinus comm...   283   4e-74
emb|CBI29287.3| unnamed protein product [Vitis vinifera]              281   1e-73
ref|XP_002273831.1| PREDICTED: TVP38/TMEM64 family membrane prot...   281   1e-73
ref|XP_002273872.1| PREDICTED: TVP38/TMEM64 family membrane prot...   275   1e-71

>ref|XP_002297894.1| predicted protein [Populus trichocarpa] gi|222845152|gb|EEE82699.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score =  284 bits (727), Expect = 2e-74
 Identities = 135/197 (68%), Positives = 163/197 (82%)
 Frame = +1

Query: 64  ISITIGILAILRSVSKKFGFEKDEILELFRDLSDRLGFWAIPIYVLIHTVTLSLCLPYAV 243
           ++  IG++AI R +SK+FG++KD  LEL  + SDRLG WA+P+YV IHT++L+LCLP AV
Sbjct: 7   VAAVIGLIAIARELSKQFGWDKDAALELLGEWSDRLGVWAMPVYVGIHTISLALCLPCAV 66

Query: 244 FFEAGASLLFGFFTAVICVFCAKILGASLSFWIGRLVFRSSSSTMEWIQKNKYFHILAKG 423
           FFEAGASLLFGF  AV+CVF AK+LGASLSFWIGRLVFRSSSS MEW+Q NKYFH+L++G
Sbjct: 67  FFEAGASLLFGFLPAVLCVFFAKVLGASLSFWIGRLVFRSSSSAMEWVQSNKYFHLLSRG 126

Query: 424 VERDGWKFVLLARFSPMPSYVINYGLAATKVGFLVDFLLPSVIGCLPMIIQNTXXXXXXX 603
           VE+DGWKFVLLARFSPMPSY+INY LAATKVGF+VDFLLP+V+GCLPMI+QNT       
Sbjct: 127 VEKDGWKFVLLARFSPMPSYLINYALAATKVGFMVDFLLPTVVGCLPMILQNTSIGSLAG 186

Query: 604 XXXXXXXXXQKSQIFSY 654
                    +KSQI+SY
Sbjct: 187 AAVASASGSKKSQIWSY 203


>ref|XP_002512701.1| conserved hypothetical protein [Ricinus communis]
           gi|223548662|gb|EEF50153.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 264

 Score =  283 bits (725), Expect = 4e-74
 Identities = 144/260 (55%), Positives = 180/260 (69%)
 Frame = +1

Query: 52  KVWTISITIGILAILRSVSKKFGFEKDEILELFRDLSDRLGFWAIPIYVLIHTVTLSLCL 231
           K W +   +GI+AI R + K+ G++K+  L++F + SD LG WA+PIYV IHT+TL+LCL
Sbjct: 4   KWWKVGAILGIVAIGRELIKQTGWDKEAALKVFAEWSDGLGIWAMPIYVGIHTLTLALCL 63

Query: 232 PYAVFFEAGASLLFGFFTAVICVFCAKILGASLSFWIGRLVFRSSSSTMEWIQKNKYFHI 411
           PYAVFFEA A LLFGF  AV+CVF AK+LGASLSFWIGRLVFRSSSS MEW Q+NKYFH+
Sbjct: 64  PYAVFFEAAAPLLFGFMPAVLCVFSAKLLGASLSFWIGRLVFRSSSSAMEWAQRNKYFHL 123

Query: 412 LAKGVERDGWKFVLLARFSPMPSYVINYGLAATKVGFLVDFLLPSVIGCLPMIIQNTXXX 591
           L+KGVE+DGW+FVLLARFSPMPSYVINY LAATKV FLVDFLLP++IGCLPMI+QNT   
Sbjct: 124 LSKGVEQDGWRFVLLARFSPMPSYVINYALAATKVEFLVDFLLPTIIGCLPMILQNTSIG 183

Query: 592 XXXXXXXXXXXXXQKSQIFSYXXXXXXXXXXXXXXXXXXXXXXELSVDEPSSGKDILDTN 771
                        QKS+++SY                      ++++ E S      D+N
Sbjct: 184 SLAGAAVASTSGSQKSKVWSYLFPLLGIISSILISMRIKKYSSDITMVESSPSNHTTDSN 243

Query: 772 KTDDSSQEALREVGSEGLRK 831
              DSS++     G +GL+K
Sbjct: 244 DV-DSSKDLSGNTGGDGLKK 262


>emb|CBI29287.3| unnamed protein product [Vitis vinifera]
          Length = 493

 Score =  281 bits (720), Expect = 1e-73
 Identities = 145/254 (57%), Positives = 180/254 (70%), Gaps = 2/254 (0%)
 Frame = +1

Query: 76  IGILAILRSVSKKFGFE--KDEILELFRDLSDRLGFWAIPIYVLIHTVTLSLCLPYAVFF 249
           +G++     +S+++G E  KD  +ELFR  SDRLG+WAIP+YV IHT+TL+LCLP AVF 
Sbjct: 186 VGVVIAGIVLSRRYGLEWDKDAAVELFRQWSDRLGYWAIPLYVSIHTLTLALCLPSAVFL 245

Query: 250 EAGASLLFGFFTAVICVFCAKILGASLSFWIGRLVFRSSSSTMEWIQKNKYFHILAKGVE 429
           EA ASLLFGF  AV+CVF AK+LGASLSFWIGRL+FRSSS+ MEW Q NKYFH+L++GVE
Sbjct: 246 EAAASLLFGFLPAVLCVFSAKLLGASLSFWIGRLIFRSSSTAMEWAQGNKYFHLLSRGVE 305

Query: 430 RDGWKFVLLARFSPMPSYVINYGLAATKVGFLVDFLLPSVIGCLPMIIQNTXXXXXXXXX 609
           RDGW+FVLLARFSP+PSYVINY LAATKVGF++DFLLPSVIGCLPMI+QNT         
Sbjct: 306 RDGWRFVLLARFSPIPSYVINYALAATKVGFILDFLLPSVIGCLPMILQNTSIGSLAGAA 365

Query: 610 XXXXXXXQKSQIFSYXXXXXXXXXXXXXXXXXXXXXXELSVDEPSSGKDILDTNKTDDSS 789
                  QKSQ++SY                      ++SV + SS +DI D N T +SS
Sbjct: 366 VATASGSQKSQVWSYVFPLLGIVSSILISLRIKKYSTDISVIQSSSSEDIHDCNNTVESS 425

Query: 790 QEALREVGSEGLRK 831
           Q   R+ G++ + K
Sbjct: 426 QTLSRK-GNKNMEK 438


>ref|XP_002273831.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305 isoform 1
           [Vitis vinifera]
          Length = 264

 Score =  281 bits (720), Expect = 1e-73
 Identities = 145/254 (57%), Positives = 180/254 (70%), Gaps = 2/254 (0%)
 Frame = +1

Query: 76  IGILAILRSVSKKFGFE--KDEILELFRDLSDRLGFWAIPIYVLIHTVTLSLCLPYAVFF 249
           +G++     +S+++G E  KD  +ELFR  SDRLG+WAIP+YV IHT+TL+LCLP AVF 
Sbjct: 10  VGVVIAGIVLSRRYGLEWDKDAAVELFRQWSDRLGYWAIPLYVSIHTLTLALCLPSAVFL 69

Query: 250 EAGASLLFGFFTAVICVFCAKILGASLSFWIGRLVFRSSSSTMEWIQKNKYFHILAKGVE 429
           EA ASLLFGF  AV+CVF AK+LGASLSFWIGRL+FRSSS+ MEW Q NKYFH+L++GVE
Sbjct: 70  EAAASLLFGFLPAVLCVFSAKLLGASLSFWIGRLIFRSSSTAMEWAQGNKYFHLLSRGVE 129

Query: 430 RDGWKFVLLARFSPMPSYVINYGLAATKVGFLVDFLLPSVIGCLPMIIQNTXXXXXXXXX 609
           RDGW+FVLLARFSP+PSYVINY LAATKVGF++DFLLPSVIGCLPMI+QNT         
Sbjct: 130 RDGWRFVLLARFSPIPSYVINYALAATKVGFILDFLLPSVIGCLPMILQNTSIGSLAGAA 189

Query: 610 XXXXXXXQKSQIFSYXXXXXXXXXXXXXXXXXXXXXXELSVDEPSSGKDILDTNKTDDSS 789
                  QKSQ++SY                      ++SV + SS +DI D N T +SS
Sbjct: 190 VATASGSQKSQVWSYVFPLLGIVSSILISLRIKKYSTDISVIQSSSSEDIHDCNNTVESS 249

Query: 790 QEALREVGSEGLRK 831
           Q   R+ G++ + K
Sbjct: 250 QTLSRK-GNKNMEK 262


>ref|XP_002273872.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305 isoform 2
           [Vitis vinifera]
          Length = 264

 Score =  275 bits (703), Expect = 1e-71
 Identities = 142/254 (55%), Positives = 177/254 (69%), Gaps = 2/254 (0%)
 Frame = +1

Query: 76  IGILAILRSVSKKFGFE--KDEILELFRDLSDRLGFWAIPIYVLIHTVTLSLCLPYAVFF 249
           +G++     +S+++G E  KD  +ELFR  SDRLG+WAIP+YV IHT+TL+LCLP AVF 
Sbjct: 10  VGVVIAGIVLSRRYGLEWDKDAAVELFRQWSDRLGYWAIPLYVSIHTLTLALCLPSAVFL 69

Query: 250 EAGASLLFGFFTAVICVFCAKILGASLSFWIGRLVFRSSSSTMEWIQKNKYFHILAKGVE 429
           EA ASLLFGF  AV+CVF AK+LGASLSFWIGR VF+ S + MEW Q NKYFH+L++GVE
Sbjct: 70  EAAASLLFGFLPAVLCVFSAKLLGASLSFWIGRFVFKRSLTAMEWAQGNKYFHLLSRGVE 129

Query: 430 RDGWKFVLLARFSPMPSYVINYGLAATKVGFLVDFLLPSVIGCLPMIIQNTXXXXXXXXX 609
           RDGW+FVLLARFSP+PSYVINY LAATKVGF++DFLLPSVIGCLPMI+QNT         
Sbjct: 130 RDGWRFVLLARFSPIPSYVINYALAATKVGFILDFLLPSVIGCLPMILQNTSIGSLAGAA 189

Query: 610 XXXXXXXQKSQIFSYXXXXXXXXXXXXXXXXXXXXXXELSVDEPSSGKDILDTNKTDDSS 789
                  QKSQ++SY                      ++SV + SS +DI D N T +SS
Sbjct: 190 VATASGSQKSQVWSYVFPLLGIVSSILISLRIKKYSTDISVIQSSSSEDIHDCNNTVESS 249

Query: 790 QEALREVGSEGLRK 831
           Q   R+ G++ + K
Sbjct: 250 QTLSRK-GNKNMEK 262


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