BLASTX nr result
ID: Coptis24_contig00013960
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00013960 (717 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002322799.1| predicted protein [Populus trichocarpa] gi|2... 131 1e-28 emb|CAN67410.1| hypothetical protein VITISV_025621 [Vitis vinifera] 124 1e-26 ref|XP_002530155.1| conserved hypothetical protein [Ricinus comm... 100 3e-19 ref|XP_003553616.1| PREDICTED: uncharacterized protein LOC100786... 94 4e-17 ref|XP_003520710.1| PREDICTED: uncharacterized protein LOC100804... 87 3e-15 >ref|XP_002322799.1| predicted protein [Populus trichocarpa] gi|222867429|gb|EEF04560.1| predicted protein [Populus trichocarpa] Length = 165 Score = 131 bits (330), Expect = 1e-28 Identities = 83/160 (51%), Positives = 103/160 (64%), Gaps = 4/160 (2%) Frame = +2 Query: 242 SLRRRNSM-TSPLLPKDLHIPNLKQQXXXXXXXXXXXXXXVDLELLSLKPT-AYTSLKEI 415 +LRRRNS+ TS ++P L +L +D+ LL LK + +YTS+K++ Sbjct: 12 TLRRRNSIATSFVIPTKL---SLHTSSLPPSHLNGTLPSHLDISLLPLKSSLSYTSIKDL 68 Query: 416 LPSLSAVQSPTGAS--TQSIYEIPIRNHLVKQAAWAYLQPMSASPGSANRHSFRHMWGRF 589 LPS + V SPT A+ T S YEIPIRN LVKQAAWAYLQPMS+SP S+ H R +W R Sbjct: 69 LPS-ATVNSPTSATSNTTSTYEIPIRNRLVKQAAWAYLQPMSSSPDSSGTHFLRRLWLRL 127 Query: 590 STWYLRNPINACYEFICQRVIPTITRAFDLILGAIRVLIN 709 ST +NPI AC+ FI RVIP+IT AFD IL AIRV N Sbjct: 128 ST---KNPITACFGFISFRVIPSITNAFDRILRAIRVHFN 164 >emb|CAN67410.1| hypothetical protein VITISV_025621 [Vitis vinifera] Length = 735 Score = 124 bits (312), Expect = 1e-26 Identities = 78/169 (46%), Positives = 95/169 (56%), Gaps = 15/169 (8%) Frame = +2 Query: 239 NSLRRRNSMTSPLLPKDLHIPN-------------LKQQXXXXXXXXXXXXXXVDLELLS 379 ++LRRRNS+ + +P L +P+ ++ VD EL+S Sbjct: 566 SNLRRRNSIGTAAIPTKLTLPSKAHYSSSFPRPNGVRVSSSTSSSSPQSSFPNVDFELIS 625 Query: 380 LKPTAYTSLKEILPSLSAVQSPTGASTQS--IYEIPIRNHLVKQAAWAYLQPMSASPGSA 553 LK AYTSLK++LPS SA QSPT A T S YEI IRN LVKQAAWAYLQPMSASPGS+ Sbjct: 626 LKSLAYTSLKDLLPSTSAAQSPTAAGTGSGSCYEISIRNRLVKQAAWAYLQPMSASPGSS 685 Query: 554 NRHSFRHMWGRFSTWYLRNPINACYEFICQRVIPTITRAFDLILGAIRV 700 F M FS LRN ++ C FI + + I RAFD IL I V Sbjct: 686 GGRLFDRMLLGFSMECLRNRVSTCLGFINRHIFSAIIRAFDRILRMIGV 734 >ref|XP_002530155.1| conserved hypothetical protein [Ricinus communis] gi|223530316|gb|EEF32210.1| conserved hypothetical protein [Ricinus communis] Length = 181 Score = 100 bits (249), Expect = 3e-19 Identities = 74/174 (42%), Positives = 93/174 (53%), Gaps = 18/174 (10%) Frame = +2 Query: 242 SLRRRNSM-TSPLLPKDLHIPNLK-----------QQXXXXXXXXXXXXXXVDLELLSLK 385 SLRRRNS+ TS +P L +P+ V EL S K Sbjct: 19 SLRRRNSISTSVFIPAKLTLPSQPFHTSSLPPQSTTNGTINCNGSGNGNDVVAFELASFK 78 Query: 386 PTA--YTSLKEILPSLSAVQSPTGASTQ----SIYEIPIRNHLVKQAAWAYLQPMSASPG 547 ++ YTSLK+ILPS +AV SPT A+ S YEI IRNHLVKQAAWAYLQPMS+SP Sbjct: 79 SSSLSYTSLKDILPS-TAVNSPTPAAATPTCGSAYEISIRNHLVKQAAWAYLQPMSSSPD 137 Query: 548 SANRHSFRHMWGRFSTWYLRNPINACYEFICQRVIPTITRAFDLILGAIRVLIN 709 S+++H + +W +FST PI AC F IT FD I+ I + +N Sbjct: 138 SSSQHFLQRLWLKFST---AGPITACIRF--------ITLVFDRIICLICIQMN 180 >ref|XP_003553616.1| PREDICTED: uncharacterized protein LOC100786476 [Glycine max] Length = 155 Score = 93.6 bits (231), Expect = 4e-17 Identities = 68/156 (43%), Positives = 83/156 (53%), Gaps = 4/156 (2%) Frame = +2 Query: 245 LRRRNSMTSPLLPKDLHIPNLKQQXXXXXXXXXXXXXXVDLELLSLKP---TAYTSLKEI 415 LRR NS+ +P +PK L +P Q EL+SLK +YTSL+++ Sbjct: 18 LRRHNSIAAPSVPK-LFLPATPPQRT------------TSFELVSLKSPFSASYTSLRDV 64 Query: 416 LPS-LSAVQSPTGASTQSIYEIPIRNHLVKQAAWAYLQPMSASPGSANRHSFRHMWGRFS 592 LPS +AV SPT AS S EI IRN LVKQAAWAYLQPMSASPG A+ F Sbjct: 65 LPSPYAAVNSPT-ASAYSGQEISIRNRLVKQAAWAYLQPMSASPGGASTPHF-------- 115 Query: 593 TWYLRNPINACYEFICQRVIPTITRAFDLILGAIRV 700 LR C F IP ++R F +L A+RV Sbjct: 116 ---LRRLSATCLGFFYHHFIPVVSRVFSRMLHALRV 148 >ref|XP_003520710.1| PREDICTED: uncharacterized protein LOC100804851 [Glycine max] Length = 156 Score = 87.0 bits (214), Expect = 3e-15 Identities = 65/153 (42%), Positives = 79/153 (51%), Gaps = 1/153 (0%) Frame = +2 Query: 245 LRRRNSMTSPLLPKDLHIPNLKQQXXXXXXXXXXXXXXVDLELLSLKPTAYTSLKEILPS 424 L R NS+T P PK L +P Q + L+S +YTSL+++LPS Sbjct: 18 LHRHNSITGPSAPK-LSLPATPPQRTSSFEL---------VSLMSPFSASYTSLRDMLPS 67 Query: 425 -LSAVQSPTGASTQSIYEIPIRNHLVKQAAWAYLQPMSASPGSANRHSFRHMWGRFSTWY 601 +AV SPT AS S EI IRN LVKQAAWAYLQPMSAS G A+ +F Sbjct: 68 PYAAVNSPT-ASVYSGQEISIRNRLVKQAAWAYLQPMSASQGGASTPNF----------- 115 Query: 602 LRNPINACYEFICQRVIPTITRAFDLILGAIRV 700 LR AC F P +TR F +L A+RV Sbjct: 116 LRRLSAACLGFFYHHFFPAVTRFFRRMLHALRV 148