BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013959
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinu...   135   4e-39
ref|XP_003544395.1| PREDICTED: probable pre-mRNA-splicing factor...   137   8e-39
ref|XP_003549455.1| PREDICTED: probable pre-mRNA-splicing factor...   137   8e-39
ref|XP_002331832.1| predicted protein [Populus trichocarpa] gi|2...   134   8e-39
ref|XP_002318357.1| predicted protein [Populus trichocarpa] gi|2...   135   1e-38

>ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223551474|gb|EEF52960.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 1177

 Score =  135 bits (341), Expect(2) = 4e-39
 Identities = 62/67 (92%), Positives = 65/67 (97%)
 Frame = +1

Query: 151 TMLDSIPKDLNRPWKDPMPETGERHLAQELRGIGLSGYDMPEWKKDAYGKTLTFGQRSKL 330
           TMLDSIPKDLNRPW+DPMPETGERHLAQELRG+GLS YDMPEWKKDA+GK LTFGQRSKL
Sbjct: 456 TMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFGKALTFGQRSKL 515

Query: 331 SIQEQRQ 351
           SIQEQRQ
Sbjct: 516 SIQEQRQ 522



 Score = 50.8 bits (120), Expect(2) = 4e-39
 Identities = 22/25 (88%), Positives = 23/25 (92%)
 Frame = +2

Query: 2   PAFLHGQTRYSIDMSPVKILKNPEG 76
           PAFL GQTRYS+DMSPVKI KNPEG
Sbjct: 406 PAFLQGQTRYSVDMSPVKIFKNPEG 430


>ref|XP_003544395.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like [Glycine max]
          Length = 1203

 Score =  137 bits (344), Expect(2) = 8e-39
 Identities = 62/67 (92%), Positives = 66/67 (98%)
 Frame = +1

Query: 151 TMLDSIPKDLNRPWKDPMPETGERHLAQELRGIGLSGYDMPEWKKDAYGKTLTFGQRSKL 330
           TMLDSIPKDLNRPW+DPMPE+GERHLAQELRG+GLS YDMPEWKKDAYGKT+TFGQRSKL
Sbjct: 482 TMLDSIPKDLNRPWEDPMPESGERHLAQELRGVGLSAYDMPEWKKDAYGKTITFGQRSKL 541

Query: 331 SIQEQRQ 351
           SIQEQRQ
Sbjct: 542 SIQEQRQ 548



 Score = 48.5 bits (114), Expect(2) = 8e-39
 Identities = 21/25 (84%), Positives = 23/25 (92%)
 Frame = +2

Query: 2   PAFLHGQTRYSIDMSPVKILKNPEG 76
           PAFL GQ+RYS+DMSPVKI KNPEG
Sbjct: 432 PAFLQGQSRYSMDMSPVKIFKNPEG 456


>ref|XP_003549455.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like [Glycine max]
          Length = 1197

 Score =  137 bits (344), Expect(2) = 8e-39
 Identities = 62/67 (92%), Positives = 66/67 (98%)
 Frame = +1

Query: 151 TMLDSIPKDLNRPWKDPMPETGERHLAQELRGIGLSGYDMPEWKKDAYGKTLTFGQRSKL 330
           TMLDSIPKDLNRPW+DPMPE+GERHLAQELRG+GLS YDMPEWKKDAYGKT+TFGQRSKL
Sbjct: 476 TMLDSIPKDLNRPWEDPMPESGERHLAQELRGVGLSAYDMPEWKKDAYGKTITFGQRSKL 535

Query: 331 SIQEQRQ 351
           SIQEQRQ
Sbjct: 536 SIQEQRQ 542



 Score = 48.5 bits (114), Expect(2) = 8e-39
 Identities = 21/25 (84%), Positives = 23/25 (92%)
 Frame = +2

Query: 2   PAFLHGQTRYSIDMSPVKILKNPEG 76
           PAFL GQ+RYS+DMSPVKI KNPEG
Sbjct: 426 PAFLQGQSRYSMDMSPVKIFKNPEG 450


>ref|XP_002331832.1| predicted protein [Populus trichocarpa] gi|222875070|gb|EEF12201.1|
           predicted protein [Populus trichocarpa]
          Length = 1171

 Score =  134 bits (338), Expect(2) = 8e-39
 Identities = 61/67 (91%), Positives = 65/67 (97%)
 Frame = +1

Query: 151 TMLDSIPKDLNRPWKDPMPETGERHLAQELRGIGLSGYDMPEWKKDAYGKTLTFGQRSKL 330
           TMLDSIPKDLNRPW+DPMPETGERHLAQELRG+GLS YDMPEWKKDA+GK LT+GQRSKL
Sbjct: 450 TMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFGKALTYGQRSKL 509

Query: 331 SIQEQRQ 351
           SIQEQRQ
Sbjct: 510 SIQEQRQ 516



 Score = 50.8 bits (120), Expect(2) = 8e-39
 Identities = 22/25 (88%), Positives = 23/25 (92%)
 Frame = +2

Query: 2   PAFLHGQTRYSIDMSPVKILKNPEG 76
           PAFL GQTRYS+DMSPVKI KNPEG
Sbjct: 400 PAFLQGQTRYSVDMSPVKIFKNPEG 424


>ref|XP_002318357.1| predicted protein [Populus trichocarpa] gi|222859030|gb|EEE96577.1|
           predicted protein [Populus trichocarpa]
          Length = 1207

 Score =  135 bits (341), Expect(2) = 1e-38
 Identities = 62/67 (92%), Positives = 65/67 (97%)
 Frame = +1

Query: 151 TMLDSIPKDLNRPWKDPMPETGERHLAQELRGIGLSGYDMPEWKKDAYGKTLTFGQRSKL 330
           TMLDSIPKDLNRPW+DPMPETGERHLAQELRG+GLS YDMPEWKKDA+GK LTFGQRSKL
Sbjct: 486 TMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFGKALTFGQRSKL 545

Query: 331 SIQEQRQ 351
           SIQEQRQ
Sbjct: 546 SIQEQRQ 552



 Score = 49.3 bits (116), Expect(2) = 1e-38
 Identities = 21/25 (84%), Positives = 23/25 (92%)
 Frame = +2

Query: 2   PAFLHGQTRYSIDMSPVKILKNPEG 76
           PAFL GQTRYS+D+SPVKI KNPEG
Sbjct: 436 PAFLQGQTRYSVDVSPVKIFKNPEG 460