BLASTX nr result

ID: Coptis24_contig00013956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013956
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323694.1| predicted protein [Populus trichocarpa] gi|2...    78   9e-13
ref|XP_003548338.1| PREDICTED: uncharacterized protein LOC100793...    74   1e-11
ref|XP_003626628.1| hypothetical protein MTR_8g005060 [Medicago ...    72   5e-11
gb|ABE93043.1| Harpin-induced 1 [Medicago truncatula] gi|3884982...    72   5e-11
ref|XP_002531822.1| conserved hypothetical protein [Ricinus comm...    71   8e-11

>ref|XP_002323694.1| predicted protein [Populus trichocarpa] gi|222868324|gb|EEF05455.1|
           predicted protein [Populus trichocarpa]
          Length = 196

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 46/107 (42%), Positives = 62/107 (57%), Gaps = 1/107 (0%)
 Frame = +3

Query: 3   SPYDHKKKRNICXXXXXXXXXXXXXXXXXXXXXX-KPKHPITNINSIDLNSLQVSFDLPR 179
           SP  HK+ RNIC                       KPK P T ++S  ++ ++VSFD+ R
Sbjct: 5   SPKKHKR-RNICLGVTAAVILFIFLLLLILGLTVFKPKQPTTTVDSTSISDMKVSFDIAR 63

Query: 180 LKLDLNLTLIVNLSITNPNKASFKYGNDSISFLYYRNDVVGQVFIPA 320
           L++D+N++L V+LSI NPNK S KY N S +FL YR  VVG+  IPA
Sbjct: 64  LRVDVNVSLDVDLSIKNPNKVSVKYKNSS-AFLNYRGQVVGEAPIPA 109


>ref|XP_003548338.1| PREDICTED: uncharacterized protein LOC100793994 [Glycine max]
          Length = 192

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 34/72 (47%), Positives = 50/72 (69%)
 Frame = +3

Query: 105 KPKHPITNINSIDLNSLQVSFDLPRLKLDLNLTLIVNLSITNPNKASFKYGNDSISFLYY 284
           K KHP+T ++S  L    +  D P+L++DLN+TL V++S+ NPNK  FKY +DS + L Y
Sbjct: 35  KAKHPVTTVDSTKLEDFHMGLDTPKLRVDLNVTLHVDVSVKNPNKVGFKY-SDSTAHLNY 93

Query: 285 RNDVVGQVFIPA 320
           R  ++G+V IPA
Sbjct: 94  RGQLIGEVPIPA 105


>ref|XP_003626628.1| hypothetical protein MTR_8g005060 [Medicago truncatula]
           gi|355520650|gb|AET01104.1| hypothetical protein
           MTR_8g005060 [Medicago truncatula]
          Length = 201

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/72 (45%), Positives = 50/72 (69%)
 Frame = +3

Query: 105 KPKHPITNINSIDLNSLQVSFDLPRLKLDLNLTLIVNLSITNPNKASFKYGNDSISFLYY 284
           K KHP+T +NS+ L    V+ D+ +L++DLN+TL V++S+ NPNK  FKY N + + L Y
Sbjct: 44  KSKHPVTTVNSLKLRDFDVNLDIAKLRVDLNVTLDVDVSVKNPNKVGFKYSN-TTAHLNY 102

Query: 285 RNDVVGQVFIPA 320
           R  ++G+V I A
Sbjct: 103 RGQLIGEVPISA 114


>gb|ABE93043.1| Harpin-induced 1 [Medicago truncatula] gi|388498244|gb|AFK37188.1|
           unknown [Medicago truncatula]
          Length = 192

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/72 (45%), Positives = 50/72 (69%)
 Frame = +3

Query: 105 KPKHPITNINSIDLNSLQVSFDLPRLKLDLNLTLIVNLSITNPNKASFKYGNDSISFLYY 284
           K KHP+T +NS+ L    V+ D+ +L++DLN+TL V++S+ NPNK  FKY N + + L Y
Sbjct: 35  KSKHPVTTVNSLKLRDFDVNLDIAKLRVDLNVTLDVDVSVKNPNKVGFKYSN-TTAHLNY 93

Query: 285 RNDVVGQVFIPA 320
           R  ++G+V I A
Sbjct: 94  RGQLIGEVPISA 105


>ref|XP_002531822.1| conserved hypothetical protein [Ricinus communis]
           gi|223528556|gb|EEF30579.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 217

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 36/72 (50%), Positives = 50/72 (69%)
 Frame = +3

Query: 105 KPKHPITNINSIDLNSLQVSFDLPRLKLDLNLTLIVNLSITNPNKASFKYGNDSISFLYY 284
           K K P T I+SI L +L+V  D  R+ +DLN+T+ V+L++TNPNK   KY N S + L Y
Sbjct: 60  KAKEPTTTIDSISLENLKVDLDAARMGVDLNMTMDVDLTVTNPNKVGLKYKNGS-ALLNY 118

Query: 285 RNDVVGQVFIPA 320
           R ++VG+V IPA
Sbjct: 119 RGELVGEVPIPA 130


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