BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013948
         (1375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267236.1| PREDICTED: 5'-3' exonuclease-like [Vitis vin...   439   e-120
emb|CBI18184.3| unnamed protein product [Vitis vinifera]              439   e-120
gb|ABK93472.1| unknown [Populus trichocarpa]                          436   e-120
ref|XP_002327332.1| predicted protein [Populus trichocarpa] gi|2...   428   e-117
ref|XP_003548949.1| PREDICTED: 5'-3' exonuclease-like [Glycine max]   409   e-112

>ref|XP_002267236.1| PREDICTED: 5'-3' exonuclease-like [Vitis vinifera]
          Length = 366

 Score =  439 bits (1128), Expect = e-120
 Identities = 220/343 (64%), Positives = 257/343 (74%), Gaps = 5/343 (1%)
 Frame = +3

Query: 12   SFSLPWRTRTSPPPTALSCFPSSIALYQPSGWRL-----AMCSNNKDNLTTSKKSRERVF 176
            S SLPW+   S     ++   ++        W L      +    +++     +S++RVF
Sbjct: 13   SLSLPWKKLRSKTRLKITVADATGNSRGSFTWALNQTVGGLLLPRRESCEEKVRSKKRVF 72

Query: 177  FLDVNPLCYNGSSPNLHSFAHWISLFFSQVSLTDPVIAVIDGEGGNEYRRKLLPSYKAHR 356
            FLDVNPLCY GS+P+LHSF HW+SLFF QVSL+DPVIAVIDGE  NEYR+KLLPSYKAHR
Sbjct: 73   FLDVNPLCYTGSTPSLHSFGHWVSLFFQQVSLSDPVIAVIDGERCNEYRQKLLPSYKAHR 132

Query: 357  RKLTTQFPPSHQFPRGVGEREHTIKDVLNKCNVPVVKVEGHEADDVIATLAEQALQNGTR 536
            RK + Q P         G     ++DVL KCNVPV+K+EG EADDV+ATL  Q LQ G R
Sbjct: 133  RKFSKQLPSQRFSSVSAGRSRQVVRDVLRKCNVPVLKIEGCEADDVVATLVGQVLQRGYR 192

Query: 537  VVIGSPDKDFKQLITEDLQIVMPMPELGRWSFYTLKHYIDQYTCDPSSDLSLRCILGDEV 716
            VVI SPDKDFKQLI+E++QIVMPMPE GRWSFYTLKHYI QY CDP SDLSLRCI+GDEV
Sbjct: 193  VVIASPDKDFKQLISEEVQIVMPMPEFGRWSFYTLKHYIAQYNCDPCSDLSLRCIMGDEV 252

Query: 717  DGVPGIQHVAPGFGRKTALKLLKKHGSLECLLSAAKVRTVGKQYVQEALNKHADYLLKNY 896
            DGVPGIQHVAPGFGRKTALKLLKKHGSLE LL+AA VRTVG+QY Q AL K+AD+L +NY
Sbjct: 253  DGVPGIQHVAPGFGRKTALKLLKKHGSLENLLNAAAVRTVGRQYAQNALTKYADFLRRNY 312

Query: 897  EVLSLRRDVGVHLEDEWLQKRETSNDAATLSEFAKLLGEPQKL 1025
            E+LSLRRDV V LE+EWL  R++ ND+  LS F KLLGE QKL
Sbjct: 313  EILSLRRDVDVQLEEEWLFDRDSRNDSVVLSNFFKLLGETQKL 355


>emb|CBI18184.3| unnamed protein product [Vitis vinifera]
          Length = 380

 Score =  439 bits (1128), Expect = e-120
 Identities = 220/343 (64%), Positives = 257/343 (74%), Gaps = 5/343 (1%)
 Frame = +3

Query: 12   SFSLPWRTRTSPPPTALSCFPSSIALYQPSGWRL-----AMCSNNKDNLTTSKKSRERVF 176
            S SLPW+   S     ++   ++        W L      +    +++     +S++RVF
Sbjct: 27   SLSLPWKKLRSKTRLKITVADATGNSRGSFTWALNQTVGGLLLPRRESCEEKVRSKKRVF 86

Query: 177  FLDVNPLCYNGSSPNLHSFAHWISLFFSQVSLTDPVIAVIDGEGGNEYRRKLLPSYKAHR 356
            FLDVNPLCY GS+P+LHSF HW+SLFF QVSL+DPVIAVIDGE  NEYR+KLLPSYKAHR
Sbjct: 87   FLDVNPLCYTGSTPSLHSFGHWVSLFFQQVSLSDPVIAVIDGERCNEYRQKLLPSYKAHR 146

Query: 357  RKLTTQFPPSHQFPRGVGEREHTIKDVLNKCNVPVVKVEGHEADDVIATLAEQALQNGTR 536
            RK + Q P         G     ++DVL KCNVPV+K+EG EADDV+ATL  Q LQ G R
Sbjct: 147  RKFSKQLPSQRFSSVSAGRSRQVVRDVLRKCNVPVLKIEGCEADDVVATLVGQVLQRGYR 206

Query: 537  VVIGSPDKDFKQLITEDLQIVMPMPELGRWSFYTLKHYIDQYTCDPSSDLSLRCILGDEV 716
            VVI SPDKDFKQLI+E++QIVMPMPE GRWSFYTLKHYI QY CDP SDLSLRCI+GDEV
Sbjct: 207  VVIASPDKDFKQLISEEVQIVMPMPEFGRWSFYTLKHYIAQYNCDPCSDLSLRCIMGDEV 266

Query: 717  DGVPGIQHVAPGFGRKTALKLLKKHGSLECLLSAAKVRTVGKQYVQEALNKHADYLLKNY 896
            DGVPGIQHVAPGFGRKTALKLLKKHGSLE LL+AA VRTVG+QY Q AL K+AD+L +NY
Sbjct: 267  DGVPGIQHVAPGFGRKTALKLLKKHGSLENLLNAAAVRTVGRQYAQNALTKYADFLRRNY 326

Query: 897  EVLSLRRDVGVHLEDEWLQKRETSNDAATLSEFAKLLGEPQKL 1025
            E+LSLRRDV V LE+EWL  R++ ND+  LS F KLLGE QKL
Sbjct: 327  EILSLRRDVDVQLEEEWLFDRDSRNDSVVLSNFFKLLGETQKL 369


>gb|ABK93472.1| unknown [Populus trichocarpa]
          Length = 375

 Score =  436 bits (1121), Expect = e-120
 Identities = 211/305 (69%), Positives = 253/305 (82%)
 Frame = +3

Query: 108  RLAMCSNNKDNLTTSKKSRERVFFLDVNPLCYNGSSPNLHSFAHWISLFFSQVSLTDPVI 287
            R  +C +NK+     + S++RVFFLDVNPLCY GS+P+LHSFAHWISLFFSQVSLTDPVI
Sbjct: 66   RSELCGSNKEK----RASKKRVFFLDVNPLCYAGSTPSLHSFAHWISLFFSQVSLTDPVI 121

Query: 288  AVIDGEGGNEYRRKLLPSYKAHRRKLTTQFPPSHQFPRGVGEREHTIKDVLNKCNVPVVK 467
            AV+DG+GG+E+RR+LLPSYKAHRRK + +     ++P    ER H + DVL KCNVPVVK
Sbjct: 122  AVLDGDGGSEHRRQLLPSYKAHRRKFSRKSSAPQKYP---AERSHVVMDVLTKCNVPVVK 178

Query: 468  VEGHEADDVIATLAEQALQNGTRVVIGSPDKDFKQLITEDLQIVMPMPELGRWSFYTLKH 647
            +EGHEADDV+ATLA Q LQNG +VVI SPDKDFKQLI+ED+QIV+P+ EL RWSFYTLKH
Sbjct: 179  IEGHEADDVVATLAGQVLQNGHKVVIASPDKDFKQLISEDVQIVLPIAELNRWSFYTLKH 238

Query: 648  YIDQYTCDPSSDLSLRCILGDEVDGVPGIQHVAPGFGRKTALKLLKKHGSLECLLSAAKV 827
            YI QY CDP SDLS RCI+GDEVDGVPGIQ+VAPGFGRKTALKLLKKHGSL+ LL AA V
Sbjct: 239  YISQYNCDPCSDLSFRCIMGDEVDGVPGIQNVAPGFGRKTALKLLKKHGSLQNLLDAAAV 298

Query: 828  RTVGKQYVQEALNKHADYLLKNYEVLSLRRDVGVHLEDEWLQKRETSNDAATLSEFAKLL 1007
            RTVGK+Y Q+AL KH+DYL +NYE+L+LRRDV V L++EWL +R+  ND+  LS F KLL
Sbjct: 299  RTVGKKYAQDALTKHSDYLRRNYEILALRRDVDVQLKEEWLVERDRCNDSIILSNFFKLL 358

Query: 1008 GEPQK 1022
             + ++
Sbjct: 359  EQSKR 363


>ref|XP_002327332.1| predicted protein [Populus trichocarpa] gi|222835702|gb|EEE74137.1|
            predicted protein [Populus trichocarpa]
          Length = 368

 Score =  428 bits (1101), Expect = e-117
 Identities = 210/306 (68%), Positives = 252/306 (82%), Gaps = 1/306 (0%)
 Frame = +3

Query: 108  RLAMCSNNKDNLTTSKKSRERVFFLDVNPLCYNGSSPNLHSFAHWISLFFSQVSLTDPVI 287
            R  +C +NK+     + S++RVFFLDVNPLCY GS+P+LHSFAHWISLFFSQVSLTDPVI
Sbjct: 58   RSELCGSNKEK----RASKKRVFFLDVNPLCYAGSTPSLHSFAHWISLFFSQVSLTDPVI 113

Query: 288  AVIDGEGGNEYRRKLLPSYKAHRRKLTTQFPPSHQFPRGVGEREHTIKDVLNKCNVPVVK 467
            AV+DG+GG+E+RR+LLPSYKAHRRK + +     ++P    ER H + DVL KCNVPVVK
Sbjct: 114  AVLDGDGGSEHRRQLLPSYKAHRRKFSRKSSAPQKYP---AERSHVVMDVLTKCNVPVVK 170

Query: 468  VEGHEADDVIATLAEQALQNGTRVVIGSPDKDFKQLITEDLQIVMPMPELGRWSFYTLKH 647
            +EGHEADDV+ATLA Q LQN  +VVI SPDKDFKQLI+ED+QIV+P+ EL RWSFYTLKH
Sbjct: 171  IEGHEADDVVATLAGQVLQNRHKVVIASPDKDFKQLISEDVQIVLPIAELNRWSFYTLKH 230

Query: 648  YIDQYTCDPSSDLSLRCILGDEVDGVPGIQHVAPGFGRKTALKLLKKHGSLECLLSAAKV 827
            YI QY CDP SDLS RCI+GDEVDGVPGIQ+VAPGFGRKTALKLLKKHGSL+ LL AA V
Sbjct: 231  YISQYNCDPCSDLSFRCIMGDEVDGVPGIQNVAPGFGRKTALKLLKKHGSLQNLLDAAAV 290

Query: 828  RTVGKQYVQEALNKHADYLLKNYEVLSLRR-DVGVHLEDEWLQKRETSNDAATLSEFAKL 1004
            RTVGK+Y Q+AL KH+DYL +NYE+L+LRR DV V L++EWL +R+  ND+  LS F KL
Sbjct: 291  RTVGKKYAQDALTKHSDYLRRNYEILALRRWDVDVQLKEEWLVERDRCNDSIILSNFFKL 350

Query: 1005 LGEPQK 1022
            L + ++
Sbjct: 351  LEQSKR 356


>ref|XP_003548949.1| PREDICTED: 5'-3' exonuclease-like [Glycine max]
          Length = 368

 Score =  409 bits (1051), Expect = e-112
 Identities = 201/296 (67%), Positives = 231/296 (78%), Gaps = 1/296 (0%)
 Frame = +3

Query: 156  KSRERVFFLDVNPLCYNGSSPNLHSFAHWISLFFSQVSLTDPVIAVIDGEGGNEYRRKLL 335
            + ++RVFFLDVNPLCY GS P+LHS   W+SLF  QVS TDPVIAVIDGE G+E+RRKLL
Sbjct: 67   EKKKRVFFLDVNPLCYEGSKPSLHSLGRWLSLFLEQVSHTDPVIAVIDGERGSEHRRKLL 126

Query: 336  PSYKAHRRKLTTQFPPSHQFPRG-VGEREHTIKDVLNKCNVPVVKVEGHEADDVIATLAE 512
            PSYKAHRRK T       +F  G VG     I DVL KCNVPV+KV+GHEADDV+ATLA 
Sbjct: 127  PSYKAHRRKFTRHISSLQRFSSGHVGRSLQVINDVLGKCNVPVIKVDGHEADDVVATLAG 186

Query: 513  QALQNGTRVVIGSPDKDFKQLITEDLQIVMPMPELGRWSFYTLKHYIDQYTCDPSSDLSL 692
            Q L  G RVVI SPDKDFKQLI++D+QIVMP+PEL RWSFYTL+HY DQY CDP SDLSL
Sbjct: 187  QVLNKGFRVVIASPDKDFKQLISDDVQIVMPLPELQRWSFYTLRHYRDQYNCDPESDLSL 246

Query: 693  RCILGDEVDGVPGIQHVAPGFGRKTALKLLKKHGSLECLLSAAKVRTVGKQYVQEALNKH 872
            RCI+GDEVDGVPGIQH+ P FGRKTALKL+KKHGSLE LL+AA +RTVG+ Y Q+AL  H
Sbjct: 247  RCIVGDEVDGVPGIQHLVPSFGRKTALKLIKKHGSLETLLNAAAIRTVGRPYAQDALKNH 306

Query: 873  ADYLLKNYEVLSLRRDVGVHLEDEWLQKRETSNDAATLSEFAKLLGEPQKLKEPKR 1040
            ADYL +NYEVL+L+RDV V L +EWL KR+  ND   LS F K L E ++L    R
Sbjct: 307  ADYLRRNYEVLALKRDVNVQLIEEWLIKRDNRNDKIALSAFFKYLEESKELTNSGR 362