BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013943
         (788 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512247.1| 40S ribosomal protein S24, putative [Ricinus...   203   3e-50
ref|XP_003591024.1| 40S ribosomal protein S24 [Medicago truncatu...   203   3e-50
gb|AFK40021.1| unknown [Lotus japonicus] gi|388516189|gb|AFK4615...   202   5e-50
gb|AFK34036.1| unknown [Lotus japonicus]                              202   5e-50
ref|XP_002518257.1| 40S ribosomal protein S24, putative [Ricinus...   202   5e-50

>ref|XP_002512247.1| 40S ribosomal protein S24, putative [Ricinus communis]
           gi|223548208|gb|EEF49699.1| 40S ribosomal protein S24,
           putative [Ricinus communis]
          Length = 137

 Score =  203 bits (517), Expect = 3e-50
 Identities = 105/146 (71%), Positives = 113/146 (77%)
 Frame = +2

Query: 2   RTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLSKIYEVXXXXXXXXXXXXXXXXX 181
           RTRKFMTNRLLSRKQF+IDVLHPGRANVSKAELKEKLS IYE                  
Sbjct: 9   RTRKFMTNRLLSRKQFIIDVLHPGRANVSKAELKEKLSSIYE------------------ 50

Query: 182 XXXXXXXXXSKIYEVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSIENAKKFEPKYRLIRN 361
                         VKDPN+IFVFKFRTHFGGGKSTGFGLIYDS+ENAKK+EPKYRLIRN
Sbjct: 51  --------------VKDPNTIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRN 96

Query: 362 GLDTKVEKSRKQLKERKNRAKKIRGV 439
           GLDTK+EKSRKQ+KERKNR+KK+RGV
Sbjct: 97  GLDTKIEKSRKQMKERKNRSKKVRGV 122


>ref|XP_003591024.1| 40S ribosomal protein S24 [Medicago truncatula]
           gi|217075254|gb|ACJ85987.1| unknown [Medicago
           truncatula] gi|355480072|gb|AES61275.1| 40S ribosomal
           protein S24 [Medicago truncatula]
           gi|388501578|gb|AFK38855.1| unknown [Medicago
           truncatula] gi|388521723|gb|AFK48923.1| unknown
           [Medicago truncatula]
          Length = 137

 Score =  203 bits (517), Expect = 3e-50
 Identities = 105/146 (71%), Positives = 114/146 (78%)
 Frame = +2

Query: 2   RTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLSKIYEVXXXXXXXXXXXXXXXXX 181
           RTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKL++IY+V                 
Sbjct: 9   RTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARIYDV----------------- 51

Query: 182 XXXXXXXXXSKIYEVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSIENAKKFEPKYRLIRN 361
                          KDPN++FVFKFRTHFGGGKSTGFGLIYDS+ENAKK+EPKYRL+RN
Sbjct: 52  ---------------KDPNTVFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLVRN 96

Query: 362 GLDTKVEKSRKQLKERKNRAKKIRGV 439
           GLDTKVEKSRKQ+KERKNRAKKIRGV
Sbjct: 97  GLDTKVEKSRKQMKERKNRAKKIRGV 122


>gb|AFK40021.1| unknown [Lotus japonicus] gi|388516189|gb|AFK46156.1| unknown
           [Lotus japonicus]
          Length = 137

 Score =  202 bits (515), Expect = 5e-50
 Identities = 104/146 (71%), Positives = 114/146 (78%)
 Frame = +2

Query: 2   RTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLSKIYEVXXXXXXXXXXXXXXXXX 181
           RTRKFMTNRLLSRKQF++DVLHPGRANVSKAELKEKL+++Y+V                 
Sbjct: 9   RTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDV----------------- 51

Query: 182 XXXXXXXXXSKIYEVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSIENAKKFEPKYRLIRN 361
                          KDPN++FVFKFRTHFGGGKSTGFGLIYDS+ENAKK+EPKYRLIRN
Sbjct: 52  ---------------KDPNTVFVFKFRTHFGGGKSTGFGLIYDSLENAKKYEPKYRLIRN 96

Query: 362 GLDTKVEKSRKQLKERKNRAKKIRGV 439
           GLDTKVEKSRKQLKERKNRAKKIRGV
Sbjct: 97  GLDTKVEKSRKQLKERKNRAKKIRGV 122


>gb|AFK34036.1| unknown [Lotus japonicus]
          Length = 137

 Score =  202 bits (515), Expect = 5e-50
 Identities = 104/146 (71%), Positives = 114/146 (78%)
 Frame = +2

Query: 2   RTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLSKIYEVXXXXXXXXXXXXXXXXX 181
           RTRKFMTNRLLSRKQF++DVLHPGRANVSKAELKEKL+++Y+V                 
Sbjct: 9   RTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDV----------------- 51

Query: 182 XXXXXXXXXSKIYEVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSIENAKKFEPKYRLIRN 361
                          KDPN++FVFKFRTHFGGGKSTGFGLIYDS+ENAKK+EPKYRLIRN
Sbjct: 52  ---------------KDPNTVFVFKFRTHFGGGKSTGFGLIYDSLENAKKYEPKYRLIRN 96

Query: 362 GLDTKVEKSRKQLKERKNRAKKIRGV 439
           GLDTKVEKSRKQLKERKNRAKKIRGV
Sbjct: 97  GLDTKVEKSRKQLKERKNRAKKIRGV 122


>ref|XP_002518257.1| 40S ribosomal protein S24, putative [Ricinus communis]
           gi|223542604|gb|EEF44143.1| 40S ribosomal protein S24,
           putative [Ricinus communis]
          Length = 137

 Score =  202 bits (515), Expect = 5e-50
 Identities = 105/146 (71%), Positives = 113/146 (77%)
 Frame = +2

Query: 2   RTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLSKIYEVXXXXXXXXXXXXXXXXX 181
           RTRKFMTNRLLSRKQF+IDVLHPGRANVSKAELKEKL+ IYEV                 
Sbjct: 9   RTRKFMTNRLLSRKQFIIDVLHPGRANVSKAELKEKLASIYEV----------------- 51

Query: 182 XXXXXXXXXSKIYEVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSIENAKKFEPKYRLIRN 361
                          KDPN+IFVFKFRTHFGGGKSTGFGLIYDS+ENAKK+EPKYRLIRN
Sbjct: 52  ---------------KDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRN 96

Query: 362 GLDTKVEKSRKQLKERKNRAKKIRGV 439
           GLDTKVEKSRKQ+KERKNR+KK+RGV
Sbjct: 97  GLDTKVEKSRKQMKERKNRSKKVRGV 122