BLASTX nr result

ID: Coptis24_contig00013942 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013942
         (999 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266989.1| PREDICTED: uncharacterized protein LOC100248...   248   2e-63
ref|XP_002329220.1| predicted protein [Populus trichocarpa] gi|2...   243   4e-62
ref|XP_002520901.1| conserved hypothetical protein [Ricinus comm...   229   1e-57
ref|XP_003544269.1| PREDICTED: uncharacterized protein LOC100802...   197   4e-48
ref|XP_003518284.1| PREDICTED: uncharacterized protein LOC100788...   188   2e-45

>ref|XP_002266989.1| PREDICTED: uncharacterized protein LOC100248425 [Vitis vinifera]
           gi|297736648|emb|CBI25519.3| unnamed protein product
           [Vitis vinifera]
          Length = 323

 Score =  248 bits (633), Expect = 2e-63
 Identities = 149/330 (45%), Positives = 183/330 (55%), Gaps = 18/330 (5%)
 Frame = +2

Query: 50  MAKICAEICIISARGLRRSSALWKLQWFAVGWIDPKSKYCTKIDTSGSTNPTWRTKFSAL 229
           M KI  E+C+ISARGL+RSS LWKLQWFAVGW+DP +KYCTKID SG+ NP W+TKFS L
Sbjct: 1   MGKIWIEVCLISARGLQRSS-LWKLQWFAVGWVDPNNKYCTKIDASGNANPVWKTKFSTL 59

Query: 230 IDNSEAKWQGLALHIELYSRDAIFLRENLQGTAVVVLKEFLAKH--KSDASNNGVEQVGS 403
           +D+SE+K+Q LAL++E+YSR+ IFLRE LQGTA V LKEFLAKH   S+AS  G + VGS
Sbjct: 60  VDDSESKFQDLALYVEVYSREPIFLREKLQGTATVNLKEFLAKHIKNSEASKPGTQDVGS 119

Query: 404 FQLRKKTSGKVQGLVXXXXXXXXXXXXXXXXXXYPGNEEGFQLKDEGNGISLGTGNGSFS 583
           FQLRK+ S K  G V                  Y G EEGF+L D  +GI+L   + S  
Sbjct: 120 FQLRKRKSSKPHGFV---DISIRISEEREEPDSYSGKEEGFELMDHSSGITLAPADASTQ 176

Query: 584 SQSHNQT-----ENYTQPQTQMSSVYDPRPNFYGKQSSVGDPNY----------XXXXXX 718
           +    +      +    PQT     +           ++G P+Y                
Sbjct: 177 AYPPQRPLAPLGQPQNPPQTNFPYSHPMPFPTNNSNPALGGPSYPSAGGTSYPPPRSPPP 236

Query: 719 XXXXXXSHVGYLPTFLPRTDQLAGTWVNLXXXXXXXXXXXXXXXXNFXXXXXXXXXXXXX 898
                 S+VGY+PTFLPRTD L GT+VN+                 F             
Sbjct: 237 PPPPPPSNVGYIPTFLPRTDHLPGTYVNM---PPSGSGAGSSRGPGFGMGVGAGALAAGA 293

Query: 899 VIFGDDFMSGFELPT-LQDPSLIISIDSPF 985
           VIFGDDFMSGF+ PT LQD SL IS D  F
Sbjct: 294 VIFGDDFMSGFDFPTGLQDASLTISTDPLF 323


>ref|XP_002329220.1| predicted protein [Populus trichocarpa] gi|222871001|gb|EEF08132.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score =  243 bits (621), Expect = 4e-62
 Identities = 148/326 (45%), Positives = 186/326 (57%), Gaps = 14/326 (4%)
 Frame = +2

Query: 50  MAKICAEICIISARGLRRSSALWKLQWFAVGWIDPKSKYCTKIDTSGSTNPTWRTKFSAL 229
           M KI  E+C+ISARGLRR+S+LWKLQWFAVGWIDPK+KYCTKID SG+ NPTW+TKF+ L
Sbjct: 1   MGKIWVEVCLISARGLRRTSSLWKLQWFAVGWIDPKNKYCTKIDASGNANPTWKTKFATL 60

Query: 230 IDNSEAKWQGLALHIELYSRDAIFLRENLQGTAVVVLKEFLAKH--KSDASNNGVEQVGS 403
           +D+S+  +Q +ALH+E+YSR+ IFLRE L+GTA VVLKEFLAK+   ++AS  G E+VGS
Sbjct: 61  LDDSD--FQDMALHVEVYSREPIFLRERLEGTATVVLKEFLAKYSNSNEASRPGTEEVGS 118

Query: 404 FQLRKKTSGKVQGLVXXXXXXXXXXXXXXXXXXYPGNEEGFQLKDEGNGISLGTGNGSFS 583
           +QLRK+ S K QGLV                  YPGNE G  L D  N I+L T     +
Sbjct: 119 YQLRKRNSSKPQGLV---DVSIHISEEREQPSSYPGNEGGIMLMDHNNKITLPTEGSGKA 175

Query: 584 SQSHNQTENYTQPQTQMSSV-YD---PRPNFYGKQSSVG-------DPNYXXXXXXXXXX 730
             S     +  QP+   SSV Y+   P P  Y   S  G        P+Y          
Sbjct: 176 FPSELPLGSLRQPENHPSSVAYNHPLPYPANYSNPSVGGPSYPPAAGPSYQPSRTPPPPP 235

Query: 731 XXSHVGYLPTFLPRTDQLAGTWVNLXXXXXXXXXXXXXXXXNFXXXXXXXXXXXXXVIFG 910
             S+VGY+PT LP TD     ++N+                               VIFG
Sbjct: 236 PPSNVGYMPTILPNTD-----YINM--PSSVAAAGPRGPRPGLAMGVGAGALAAGAVIFG 288

Query: 911 DDFMSGFELPT-LQDPSLIISIDSPF 985
           DDFMSGF++ T L DPSL I+ + PF
Sbjct: 289 DDFMSGFDILTGLHDPSLTITTNPPF 314


>ref|XP_002520901.1| conserved hypothetical protein [Ricinus communis]
           gi|223540032|gb|EEF41610.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 378

 Score =  229 bits (583), Expect = 1e-57
 Identities = 142/332 (42%), Positives = 181/332 (54%), Gaps = 20/332 (6%)
 Frame = +2

Query: 50  MAKICAEICIISARGLRRSSALWKLQWFAVGWIDPKSKYCTKIDTSGSTNPTWRTKFSAL 229
           MAKI  E+C+ISARGLRR+S+LWKLQWFAVGWIDP +KYCTKID SG+ NP W+TKF+ L
Sbjct: 72  MAKIWVEVCLISARGLRRTSSLWKLQWFAVGWIDPNNKYCTKIDPSGNANPIWKTKFATL 131

Query: 230 IDNSEAKWQGLALHIELYSRDAIFLRENLQGTAVVVLKEFLAKHKSDASNNGVEQVGSFQ 409
           +D+S   +Q +ALH+E+YSR+ +FLRE+LQGTA V LKEFLAK        G E+VGS+Q
Sbjct: 132 VDDS--NFQDMALHVEVYSREPLFLRESLQGTATVALKEFLAK------TPGKEEVGSYQ 183

Query: 410 LRKKTSGKVQGLVXXXXXXXXXXXXXXXXXXYPGNEEGFQLKDEGNGISL---GTGNGSF 580
           LR+++S K QG V                  Y GNE   +L D  + I+L   G    +F
Sbjct: 184 LRRRSSSKPQGFV---DISIHISEDKGDPSSYTGNEGQLKLMDHHHNIALSSEGVSGKTF 240

Query: 581 SSQ--------SHNQTENYTQPQTQMSSVYDPRPNFYGKQSSVG--------DPNYXXXX 712
            S+          NQ+ N++           P P  Y  QS VG         P+Y    
Sbjct: 241 PSELPLAPPRRPENQSSNFSYAHPM------PYPTNYSSQSLVGPSYPPAAAGPSYNPPL 294

Query: 713 XXXXXXXXSHVGYLPTFLPRTDQLAGTWVNLXXXXXXXXXXXXXXXXNFXXXXXXXXXXX 892
                   S+VGY+PTFLP +D     ++N+                             
Sbjct: 295 TPPPPPPPSNVGYVPTFLPNSD-----YINM---PSSLAPSGRGARPGLAMGVGAGALAA 346

Query: 893 XXVIFGDDFMSGFELP-TLQDPSLIISIDSPF 985
             VIFGDDFMSGF++P TL DPSL IS D PF
Sbjct: 347 GAVIFGDDFMSGFDIPATLPDPSLTISTDPPF 378


>ref|XP_003544269.1| PREDICTED: uncharacterized protein LOC100802456 [Glycine max]
          Length = 313

 Score =  197 bits (500), Expect = 4e-48
 Identities = 127/325 (39%), Positives = 166/325 (51%), Gaps = 13/325 (4%)
 Frame = +2

Query: 50  MAKICAEICIISARGLRRSSALWKLQWFAVGWIDPKSKYCTKIDTSGSTNPTWRTKFSAL 229
           MAKI  E+C+ISARG+R S +LWK QW+AVGW+DPKSKYCTK+DTSG+TNP WRTKF+  
Sbjct: 1   MAKIWIEVCLISARGVRGSPSLWKRQWYAVGWVDPKSKYCTKVDTSGNTNPIWRTKFAVH 60

Query: 230 IDNSEAKWQGLALHIELYSRDAIFLRENLQGTAVVVLKEFLAKHKSDASNNGVEQVGSFQ 409
           +D+SE     LALH+E+YS D +FL E L G+A VVL+EFLAK      +N  E+VGS+Q
Sbjct: 61  VDDSE---PDLALHVEVYSIDPVFLTEKLHGSATVVLREFLAKE----VHNNSEEVGSYQ 113

Query: 410 LRKKTSGKVQGLVXXXXXXXXXXXXXXXXXXYPGNEEGFQLKDEGNG----ISLGTGNGS 577
           LRKK S K  G V                    G+  G  L D GN     ++ GTG G 
Sbjct: 114 LRKKKSNKPSGFVDVSIRVSEDKEEPNFHP--QGDGGGIVLLDYGNNSTIHLTTGTGFGQ 171

Query: 578 -FSSQSHNQTENYTQPQTQMSSVYD---PRPNFYGKQSSVGDPNY-----XXXXXXXXXX 730
            +  Q    + +  Q Q Q +  +    P P  Y     VG P+Y               
Sbjct: 172 PYPQQKAQASFHGPQKQAQTNVPHSHPVPFPADYATNPYVGGPSYAPAGPSYQPPRTTTP 231

Query: 731 XXSHVGYLPTFLPRTDQLAGTWVNLXXXXXXXXXXXXXXXXNFXXXXXXXXXXXXXVIFG 910
             S+V Y P F P +  +A ++ N+                 F             VIFG
Sbjct: 232 SPSNVNYAPNFFPSSGGMAPSYFNMPSSSSSGAGPRPRGPPGFAIGAGAGALAAGAVIFG 291

Query: 911 DDFMSGFELPTLQDPSLIISIDSPF 985
           D+ MSGF+   + DP+L I+ D  F
Sbjct: 292 DNIMSGFD---VGDPTLTIATDPLF 313


>ref|XP_003518284.1| PREDICTED: uncharacterized protein LOC100788042 [Glycine max]
          Length = 324

 Score =  188 bits (477), Expect = 2e-45
 Identities = 123/334 (36%), Positives = 167/334 (50%), Gaps = 22/334 (6%)
 Frame = +2

Query: 50  MAKICAEICIISARGLRRSSALWKLQWFAVGWIDPKSKYCTKIDTSGSTNPTWRTKFSAL 229
           MAKI  E+C+ISARG+R S +LWK QW+AVGW+DPKSKYCTK+D SG+ NP WRTKF+  
Sbjct: 1   MAKIWIEVCLISARGVRGSPSLWKRQWYAVGWVDPKSKYCTKVDASGNANPVWRTKFALQ 60

Query: 230 IDNSEAKWQGLALHIELYSRDAIFLRENLQGTAVVVLKEFLAKHKSDASNNGVEQVGSFQ 409
           +DNSE     LALH+E+YSRD +FL E L G+A VVL+EFL K      +N  E+VGS+Q
Sbjct: 61  VDNSE---PDLALHVEVYSRDPVFLTEKLHGSATVVLREFLTKE----VHNNSEEVGSYQ 113

Query: 410 LRKKTSGKVQGLVXXXXXXXXXXXXXXXXXXYPGNEEGFQLKDEGNG---ISLGTGNGS- 577
           LRK  S K  G V                  +P  + G  + D GN    ++ G G G  
Sbjct: 114 LRKNKSNKPSGFV---DVSIRVSEDKEELNFHPQGDGGGIILDYGNSTTHLTTGAGFGQP 170

Query: 578 FSSQSHNQTENYTQPQTQMSSVYD---PRPNFYGKQSSVGDPNY-----------XXXXX 715
           +  +  + + +  Q Q Q +  Y    P P  Y     +G P+Y                
Sbjct: 171 YPQKRAHGSFHGPQKQAQTNFPYSHPVPFPADYATDPYMGGPSYAPAGPSYQPPRTITPP 230

Query: 716 XXXXXXXSHVGYLPTFLPRTDQLAGTWVNL--XXXXXXXXXXXXXXXXNFXXXXXXXXXX 889
                  S+V Y P F P +  +A ++ N+                   F          
Sbjct: 231 PPPPPPPSNVNYAPNFFPSSGGMAPSYFNMPSSSSSSSGAGPRPRGPPGFAIGAGAGALA 290

Query: 890 XXXVIFGDDFMSGFELPT--LQDPSLIISIDSPF 985
              V+FGD+FMSGF++P+    DP+L I+ D  F
Sbjct: 291 AGAVMFGDNFMSGFDVPSGFGGDPTLTIATDPLF 324


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