BLASTX nr result
ID: Coptis24_contig00013936
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00013936 (248 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003517516.1| PREDICTED: magnesium-chelatase subunit chlD,... 138 5e-31 ref|XP_004140205.1| PREDICTED: magnesium-chelatase subunit ChlD,... 137 1e-30 ref|XP_002513534.1| Magnesium-chelatase subunit chlD, chloroplas... 135 3e-30 ref|XP_003538089.1| PREDICTED: magnesium-chelatase subunit chlD,... 134 6e-30 ref|XP_002314091.1| predicted protein [Populus trichocarpa] gi|2... 132 2e-29 >ref|XP_003517516.1| PREDICTED: magnesium-chelatase subunit chlD, chloroplastic-like [Glycine max] Length = 750 Score = 138 bits (347), Expect = 5e-31 Identities = 65/82 (79%), Positives = 74/82 (90%) Frame = -3 Query: 246 TVMARGRHVVLPPIEVVVGSFSNADPTCPQEWEDGLSEKLEYDAAGNMKTTIVRSPFVPI 67 TVMARG H +LPPIEVVVGS +NADPTCP+EWEDGL+E LEYD+AGN+KT I++SPFV I Sbjct: 115 TVMARGLHAILPPIEVVVGSIANADPTCPEEWEDGLTECLEYDSAGNIKTRIIKSPFVQI 174 Query: 66 LLAVTEDRLIGSVDVEESVKTG 1 L +TEDRLIGSVDVEESVKTG Sbjct: 175 PLGITEDRLIGSVDVEESVKTG 196 >ref|XP_004140205.1| PREDICTED: magnesium-chelatase subunit ChlD, chloroplastic-like [Cucumis sativus] Length = 748 Score = 137 bits (344), Expect = 1e-30 Identities = 64/82 (78%), Positives = 75/82 (91%) Frame = -3 Query: 246 TVMARGRHVVLPPIEVVVGSFSNADPTCPQEWEDGLSEKLEYDAAGNMKTTIVRSPFVPI 67 TVMARG H VLPPIEVVVGS SNADP+CP+EWEDGL++++EYD+AGN+KT IV++PF+ I Sbjct: 112 TVMARGLHAVLPPIEVVVGSISNADPSCPEEWEDGLADRVEYDSAGNIKTQIVKTPFIQI 171 Query: 66 LLAVTEDRLIGSVDVEESVKTG 1 L VTEDRLIGSVDVEESVKTG Sbjct: 172 PLGVTEDRLIGSVDVEESVKTG 193 >ref|XP_002513534.1| Magnesium-chelatase subunit chlD, chloroplast precursor, putative [Ricinus communis] gi|223547442|gb|EEF48937.1| Magnesium-chelatase subunit chlD, chloroplast precursor, putative [Ricinus communis] Length = 760 Score = 135 bits (340), Expect = 3e-30 Identities = 63/82 (76%), Positives = 74/82 (90%) Frame = -3 Query: 246 TVMARGRHVVLPPIEVVVGSFSNADPTCPQEWEDGLSEKLEYDAAGNMKTTIVRSPFVPI 67 TVMARG H +LPPI+VVVGS +NADP+CP+EWEDGL+E++EYD+ GN+KT +VRSPFV I Sbjct: 128 TVMARGLHAILPPIDVVVGSIANADPSCPEEWEDGLAERVEYDSDGNIKTEVVRSPFVQI 187 Query: 66 LLAVTEDRLIGSVDVEESVKTG 1 L VTEDRLIGSVDVEESVKTG Sbjct: 188 PLGVTEDRLIGSVDVEESVKTG 209 >ref|XP_003538089.1| PREDICTED: magnesium-chelatase subunit chlD, chloroplastic-like [Glycine max] Length = 750 Score = 134 bits (338), Expect = 6e-30 Identities = 64/82 (78%), Positives = 72/82 (87%) Frame = -3 Query: 246 TVMARGRHVVLPPIEVVVGSFSNADPTCPQEWEDGLSEKLEYDAAGNMKTTIVRSPFVPI 67 TVMARG H +LPPIEVV GS +NADPTCP+EWEDGL+E LEYD+ GN+KT I++SPFV I Sbjct: 115 TVMARGLHAILPPIEVVEGSIANADPTCPEEWEDGLTECLEYDSTGNIKTRIIKSPFVQI 174 Query: 66 LLAVTEDRLIGSVDVEESVKTG 1 L VTEDRLIGSVDVEESVKTG Sbjct: 175 PLGVTEDRLIGSVDVEESVKTG 196 >ref|XP_002314091.1| predicted protein [Populus trichocarpa] gi|222850499|gb|EEE88046.1| predicted protein [Populus trichocarpa] Length = 786 Score = 132 bits (333), Expect = 2e-29 Identities = 62/82 (75%), Positives = 73/82 (89%) Frame = -3 Query: 246 TVMARGRHVVLPPIEVVVGSFSNADPTCPQEWEDGLSEKLEYDAAGNMKTTIVRSPFVPI 67 TVMARG H VLPPI+VV+GS +NADP CP+EWEDGL+E++EYD+ GN+KT +VRSPF+ I Sbjct: 130 TVMARGLHEVLPPIDVVMGSIANADPVCPEEWEDGLAEQVEYDSDGNIKTQVVRSPFIQI 189 Query: 66 LLAVTEDRLIGSVDVEESVKTG 1 L VTEDRLIGSVDVEESVKTG Sbjct: 190 PLGVTEDRLIGSVDVEESVKTG 211