BLASTX nr result

ID: Coptis24_contig00013936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013936
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517516.1| PREDICTED: magnesium-chelatase subunit chlD,...   138   5e-31
ref|XP_004140205.1| PREDICTED: magnesium-chelatase subunit ChlD,...   137   1e-30
ref|XP_002513534.1| Magnesium-chelatase subunit chlD, chloroplas...   135   3e-30
ref|XP_003538089.1| PREDICTED: magnesium-chelatase subunit chlD,...   134   6e-30
ref|XP_002314091.1| predicted protein [Populus trichocarpa] gi|2...   132   2e-29

>ref|XP_003517516.1| PREDICTED: magnesium-chelatase subunit chlD, chloroplastic-like
           [Glycine max]
          Length = 750

 Score =  138 bits (347), Expect = 5e-31
 Identities = 65/82 (79%), Positives = 74/82 (90%)
 Frame = -3

Query: 246 TVMARGRHVVLPPIEVVVGSFSNADPTCPQEWEDGLSEKLEYDAAGNMKTTIVRSPFVPI 67
           TVMARG H +LPPIEVVVGS +NADPTCP+EWEDGL+E LEYD+AGN+KT I++SPFV I
Sbjct: 115 TVMARGLHAILPPIEVVVGSIANADPTCPEEWEDGLTECLEYDSAGNIKTRIIKSPFVQI 174

Query: 66  LLAVTEDRLIGSVDVEESVKTG 1
            L +TEDRLIGSVDVEESVKTG
Sbjct: 175 PLGITEDRLIGSVDVEESVKTG 196


>ref|XP_004140205.1| PREDICTED: magnesium-chelatase subunit ChlD, chloroplastic-like
           [Cucumis sativus]
          Length = 748

 Score =  137 bits (344), Expect = 1e-30
 Identities = 64/82 (78%), Positives = 75/82 (91%)
 Frame = -3

Query: 246 TVMARGRHVVLPPIEVVVGSFSNADPTCPQEWEDGLSEKLEYDAAGNMKTTIVRSPFVPI 67
           TVMARG H VLPPIEVVVGS SNADP+CP+EWEDGL++++EYD+AGN+KT IV++PF+ I
Sbjct: 112 TVMARGLHAVLPPIEVVVGSISNADPSCPEEWEDGLADRVEYDSAGNIKTQIVKTPFIQI 171

Query: 66  LLAVTEDRLIGSVDVEESVKTG 1
            L VTEDRLIGSVDVEESVKTG
Sbjct: 172 PLGVTEDRLIGSVDVEESVKTG 193


>ref|XP_002513534.1| Magnesium-chelatase subunit chlD, chloroplast precursor, putative
           [Ricinus communis] gi|223547442|gb|EEF48937.1|
           Magnesium-chelatase subunit chlD, chloroplast precursor,
           putative [Ricinus communis]
          Length = 760

 Score =  135 bits (340), Expect = 3e-30
 Identities = 63/82 (76%), Positives = 74/82 (90%)
 Frame = -3

Query: 246 TVMARGRHVVLPPIEVVVGSFSNADPTCPQEWEDGLSEKLEYDAAGNMKTTIVRSPFVPI 67
           TVMARG H +LPPI+VVVGS +NADP+CP+EWEDGL+E++EYD+ GN+KT +VRSPFV I
Sbjct: 128 TVMARGLHAILPPIDVVVGSIANADPSCPEEWEDGLAERVEYDSDGNIKTEVVRSPFVQI 187

Query: 66  LLAVTEDRLIGSVDVEESVKTG 1
            L VTEDRLIGSVDVEESVKTG
Sbjct: 188 PLGVTEDRLIGSVDVEESVKTG 209


>ref|XP_003538089.1| PREDICTED: magnesium-chelatase subunit chlD, chloroplastic-like
           [Glycine max]
          Length = 750

 Score =  134 bits (338), Expect = 6e-30
 Identities = 64/82 (78%), Positives = 72/82 (87%)
 Frame = -3

Query: 246 TVMARGRHVVLPPIEVVVGSFSNADPTCPQEWEDGLSEKLEYDAAGNMKTTIVRSPFVPI 67
           TVMARG H +LPPIEVV GS +NADPTCP+EWEDGL+E LEYD+ GN+KT I++SPFV I
Sbjct: 115 TVMARGLHAILPPIEVVEGSIANADPTCPEEWEDGLTECLEYDSTGNIKTRIIKSPFVQI 174

Query: 66  LLAVTEDRLIGSVDVEESVKTG 1
            L VTEDRLIGSVDVEESVKTG
Sbjct: 175 PLGVTEDRLIGSVDVEESVKTG 196


>ref|XP_002314091.1| predicted protein [Populus trichocarpa] gi|222850499|gb|EEE88046.1|
           predicted protein [Populus trichocarpa]
          Length = 786

 Score =  132 bits (333), Expect = 2e-29
 Identities = 62/82 (75%), Positives = 73/82 (89%)
 Frame = -3

Query: 246 TVMARGRHVVLPPIEVVVGSFSNADPTCPQEWEDGLSEKLEYDAAGNMKTTIVRSPFVPI 67
           TVMARG H VLPPI+VV+GS +NADP CP+EWEDGL+E++EYD+ GN+KT +VRSPF+ I
Sbjct: 130 TVMARGLHEVLPPIDVVMGSIANADPVCPEEWEDGLAEQVEYDSDGNIKTQVVRSPFIQI 189

Query: 66  LLAVTEDRLIGSVDVEESVKTG 1
            L VTEDRLIGSVDVEESVKTG
Sbjct: 190 PLGVTEDRLIGSVDVEESVKTG 211


Top