BLASTX nr result

ID: Coptis24_contig00013935 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013935
         (857 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517939.1| Beta-expansin 3 precursor, putative [Ricinus...   399   e-109
ref|XP_002329415.1| hypothetical protein POPTRDRAFT_836962 [Popu...   392   e-107
ref|XP_002319359.1| hypothetical protein POPTRDRAFT_243090 [Popu...   385   e-105
ref|XP_004139938.1| PREDICTED: expansin-B3-like [Cucumis sativus]     383   e-104
ref|XP_002267127.2| PREDICTED: expansin-B3-like [Vitis vinifera]...   380   e-103

>ref|XP_002517939.1| Beta-expansin 3 precursor, putative [Ricinus communis]
           gi|223542921|gb|EEF44457.1| Beta-expansin 3 precursor,
           putative [Ricinus communis]
          Length = 259

 Score =  399 bits (1026), Expect = e-109
 Identities = 190/256 (74%), Positives = 208/256 (81%), Gaps = 4/256 (1%)
 Frame = +3

Query: 93  QFLALVLVSMF--FPV--NPLPQLTDLHWKPATATWYGSPEXXXXXXXXXXXXPLVDVKP 260
           QFLAL +V     F V      ++TDLHWKPATATWYGSP+             LVDVKP
Sbjct: 2   QFLALYIVVFLKCFVVYGQVHHRVTDLHWKPATATWYGSPDGDGSDGGACGYGSLVDVKP 61

Query: 261 LKARVGAASPILFKNGEGCGACYKVKCLEKSICSRRAVTVIITDECPGGYCSSGRTHFDL 440
           LKARVGA SPILFKNGEGCGACYKVKCL+KSICSRRAVT+I+TDECPGGYCS+GRTHFDL
Sbjct: 62  LKARVGAVSPILFKNGEGCGACYKVKCLDKSICSRRAVTIIVTDECPGGYCSNGRTHFDL 121

Query: 441 SGAAFGRMAVSGNSGQLRNRGEISVIFRRTPCKYPGKNVAFHVNEGSTEYWLSLLVEYED 620
           SGAAFGRMA++G SGQLRNRGE+ V +RRTPCKYPGKN+AFHVNEGST YWLSLLVE+ED
Sbjct: 122 SGAAFGRMAITGESGQLRNRGELPVTYRRTPCKYPGKNIAFHVNEGSTNYWLSLLVEFED 181

Query: 621 GDGDIGSMHIKPASSTEWLEMKHLWGANWCIIGGPLQGPFSVKXXXXXXXXXXXARGVIP 800
           GDGD+GSMHI+ A  +EWLEM HLWGANWCIIGGPL+GPFSVK           AR VIP
Sbjct: 182 GDGDVGSMHIREAGGSEWLEMNHLWGANWCIIGGPLKGPFSVKLTTLSTGRGLSARDVIP 241

Query: 801 RNWSPKATYTSRLNFY 848
           RNWSPKATYTSRL FY
Sbjct: 242 RNWSPKATYTSRLKFY 257


>ref|XP_002329415.1| hypothetical protein POPTRDRAFT_836962 [Populus trichocarpa]
           gi|222870465|gb|EEF07596.1| hypothetical protein
           POPTRDRAFT_836962 [Populus trichocarpa]
          Length = 267

 Score =  392 bits (1007), Expect = e-107
 Identities = 178/248 (71%), Positives = 202/248 (81%)
 Frame = +3

Query: 105 LVLVSMFFPVNPLPQLTDLHWKPATATWYGSPEXXXXXXXXXXXXPLVDVKPLKARVGAA 284
           L L+     V+P   + DLHWKPATATWYGSP+             LVDVKP +ARVGA 
Sbjct: 19  LFLLGWSLQVHPQHNVADLHWKPATATWYGSPDGDGSDGGACGYGSLVDVKPFRARVGAV 78

Query: 285 SPILFKNGEGCGACYKVKCLEKSICSRRAVTVIITDECPGGYCSSGRTHFDLSGAAFGRM 464
           SP+LFKNGEGCGACYKV+CL+KSICSRRAVT+I+TDECPGGYCS+G THFDLSGAAFGRM
Sbjct: 79  SPVLFKNGEGCGACYKVRCLDKSICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRM 138

Query: 465 AVSGNSGQLRNRGEISVIFRRTPCKYPGKNVAFHVNEGSTEYWLSLLVEYEDGDGDIGSM 644
           A+SG +GQLRNRGEI VI+RRTPCKYPGKN+AFHVNEGST+YWLS+LVE+EDGDGD+GSM
Sbjct: 139 AISGENGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSILVEFEDGDGDVGSM 198

Query: 645 HIKPASSTEWLEMKHLWGANWCIIGGPLQGPFSVKXXXXXXXXXXXARGVIPRNWSPKAT 824
           HI+ A  TEWLEM H+WGA WCII GPL+GPFSVK           AR VIPRNW+PKAT
Sbjct: 199 HIREAGGTEWLEMNHVWGATWCIIRGPLKGPFSVKLTTLTTGRTLSAREVIPRNWAPKAT 258

Query: 825 YTSRLNFY 848
           YTSRLNF+
Sbjct: 259 YTSRLNFF 266


>ref|XP_002319359.1| hypothetical protein POPTRDRAFT_243090 [Populus trichocarpa]
           gi|222857735|gb|EEE95282.1| hypothetical protein
           POPTRDRAFT_243090 [Populus trichocarpa]
          Length = 237

 Score =  385 bits (989), Expect = e-105
 Identities = 175/232 (75%), Positives = 193/232 (83%)
 Frame = +3

Query: 150 LTDLHWKPATATWYGSPEXXXXXXXXXXXXPLVDVKPLKARVGAASPILFKNGEGCGACY 329
           + DLHWKPATATWYGSP+             LVDVKPL+ARVGA SPILFKNGEGCGACY
Sbjct: 6   VADLHWKPATATWYGSPDGDGSNGGACGYGSLVDVKPLRARVGAVSPILFKNGEGCGACY 65

Query: 330 KVKCLEKSICSRRAVTVIITDECPGGYCSSGRTHFDLSGAAFGRMAVSGNSGQLRNRGEI 509
           KV+CL+KSICS RAVT+I+TDECPGGYCS+G THFDLSGAAFG MA+SG +GQLRNRGEI
Sbjct: 66  KVRCLDKSICSERAVTIIVTDECPGGYCSNGNTHFDLSGAAFGHMAISGENGQLRNRGEI 125

Query: 510 SVIFRRTPCKYPGKNVAFHVNEGSTEYWLSLLVEYEDGDGDIGSMHIKPASSTEWLEMKH 689
            VI+RRTPCKYPGKN+AFHVNEGST+YWLSLLVE+EDGDGD+GSMHI+ A  TEWLEM H
Sbjct: 126 PVIYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDVGSMHIREAGGTEWLEMNH 185

Query: 690 LWGANWCIIGGPLQGPFSVKXXXXXXXXXXXARGVIPRNWSPKATYTSRLNF 845
           LWGANWC+I GPL+GP SVK           AR VIPRNW PKATYTSRLNF
Sbjct: 186 LWGANWCVIRGPLKGPLSVKLTTLSTGRTLSARDVIPRNWVPKATYTSRLNF 237


>ref|XP_004139938.1| PREDICTED: expansin-B3-like [Cucumis sativus]
          Length = 269

 Score =  383 bits (984), Expect = e-104
 Identities = 182/271 (67%), Positives = 206/271 (76%), Gaps = 14/271 (5%)
 Frame = +3

Query: 78  MQLFPQFLALVLVSMFFPV--------------NPLPQLTDLHWKPATATWYGSPEXXXX 215
           MQLF       L++ FF                +P+P   DLHW PATATWYGSPE    
Sbjct: 1   MQLFLHRSTFRLITAFFSAAALLHWFAAAAHLQHPVP---DLHWLPATATWYGSPEGDGS 57

Query: 216 XXXXXXXXPLVDVKPLKARVGAASPILFKNGEGCGACYKVKCLEKSICSRRAVTVIITDE 395
                    LVDVKPLKARVGA SP+LF+NGEGCGACYKVKCL+ +ICSRRAVT+I+TDE
Sbjct: 58  DGGACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDE 117

Query: 396 CPGGYCSSGRTHFDLSGAAFGRMAVSGNSGQLRNRGEISVIFRRTPCKYPGKNVAFHVNE 575
           CPGGYCS+G THFDLSGAAFGRMA++G  GQLRNRGEI VI+RRTPCKYPGKN+AFHVNE
Sbjct: 118 CPGGYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNE 177

Query: 576 GSTEYWLSLLVEYEDGDGDIGSMHIKPASSTEWLEMKHLWGANWCIIGGPLQGPFSVKXX 755
           GST+YWLSLLVE+EDGDGDIG+M IK  +S EWL+M HLWGANWCIIGGPL+GPFSV+  
Sbjct: 178 GSTDYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLT 237

Query: 756 XXXXXXXXXARGVIPRNWSPKATYTSRLNFY 848
                    AR +IPRNWSPKATYTSRL F+
Sbjct: 238 TLSTGRTLSARDIIPRNWSPKATYTSRLKFF 268


>ref|XP_002267127.2| PREDICTED: expansin-B3-like [Vitis vinifera]
           gi|297739116|emb|CBI28767.3| unnamed protein product
           [Vitis vinifera]
          Length = 259

 Score =  380 bits (977), Expect = e-103
 Identities = 173/233 (74%), Positives = 196/233 (84%)
 Frame = +3

Query: 150 LTDLHWKPATATWYGSPEXXXXXXXXXXXXPLVDVKPLKARVGAASPILFKNGEGCGACY 329
           L++ HW  ATATWYGSP+             LVDVKP +ARVGA SP+LFK G GCGACY
Sbjct: 27  LSNAHWHSATATWYGSPDGDGSDGGACGYGSLVDVKPFRARVGAVSPVLFKGGVGCGACY 86

Query: 330 KVKCLEKSICSRRAVTVIITDECPGGYCSSGRTHFDLSGAAFGRMAVSGNSGQLRNRGEI 509
           KVKCL+ +ICSRRAVT+I+TDECPGGYCS GRTHFDLSGAAFGRMAV+GN+ QLR+RGEI
Sbjct: 87  KVKCLDHNICSRRAVTIIVTDECPGGYCSGGRTHFDLSGAAFGRMAVAGNNNQLRDRGEI 146

Query: 510 SVIFRRTPCKYPGKNVAFHVNEGSTEYWLSLLVEYEDGDGDIGSMHIKPASSTEWLEMKH 689
           SVIFRRTPCKYPGKN+AFHVNEGST+YWLSLLVE+EDGDGD+GSMHI+ ASSTEWLEM+H
Sbjct: 147 SVIFRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDVGSMHIREASSTEWLEMRH 206

Query: 690 LWGANWCIIGGPLQGPFSVKXXXXXXXXXXXARGVIPRNWSPKATYTSRLNFY 848
           +WGA+WCI GGPL+GPFSVK           AR VIPRNW+PKATYTSRLNF+
Sbjct: 207 VWGASWCITGGPLKGPFSVKLTTLSTGRTLSAREVIPRNWAPKATYTSRLNFF 259


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