BLASTX nr result

ID: Coptis24_contig00013926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013926
         (1343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002451486.1| hypothetical protein SORBIDRAFT_04g002725 [S...   260   6e-67
gb|AEF33496.1| putative transposase [Saccharum hybrid cultivar R...   252   1e-64
ref|NP_001060325.2| Os07g0624100 [Oryza sativa Japonica Group] g...   237   4e-60
gb|AAO18461.1| hypothetical protein [Oryza sativa Japonica Group]     234   3e-59
ref|NP_001051732.2| Os03g0822100 [Oryza sativa Japonica Group] g...   234   3e-59

>ref|XP_002451486.1| hypothetical protein SORBIDRAFT_04g002725 [Sorghum bicolor]
            gi|241931317|gb|EES04462.1| hypothetical protein
            SORBIDRAFT_04g002725 [Sorghum bicolor]
          Length = 604

 Score =  260 bits (664), Expect = 6e-67
 Identities = 137/448 (30%), Positives = 259/448 (57%), Gaps = 8/448 (1%)
 Frame = -3

Query: 1326 KARCRYCRKLMSCVASNGTSHLRRHTESCLSK-NTHSIRPEQVTTTPPGEVVVNSPFDQA 1150
            + RC++C ++ +   ++GTSH+RRH E+C  +   H +  +  + +    V+ N  FD  
Sbjct: 24   QGRCKHCYEVFAAARTSGTSHMRRHLENCEPRLKMHDLVEKLQSVSTESAVLTNWRFDPK 83

Query: 1149 RACRDTAKLVIELELPFSWAEDSHFEEWVHSFNPHLEPISRHTIKDIVLEKFEEEKSVLR 970
                +  +L++  ELPFS+ E   F  +  S NP  E +SR TIK+ +LE ++  ++ L+
Sbjct: 84   LTRCELVRLIVLHELPFSFVEYDGFRRYSASLNPLAETVSRTTIKENILEAYKNHRTALK 143

Query: 969  SLLQSISGKVCLTSTLWTTDQSMGYVCITAHFVDQDWKLNKRTVSFPMPEYPNTEFTIFE 790
             + ++ + +  LT+ LWT++Q++GY+C+T H++D DWK+ KR + F + + P+  F ++ 
Sbjct: 144  EMFENCNFRFSLTADLWTSNQNIGYMCVTCHYIDDDWKVQKRIIKFCVVKTPHDGFNLYT 203

Query: 789  AIYSSILSWNLSEKVFTITLDDDISTDVTRRL--KDLLFTNNHSLGKQLFHVRCSTYILN 616
            ++  +I  +N+ +K+F+ITLD+  S +    +   +LL  +       LFHVRC+ +++N
Sbjct: 204  SMLRTIRFYNIEDKLFSITLDNATSNNTMMDILKANLLKMDLLHCDGDLFHVRCAAHVIN 263

Query: 615  KIVDEGLEGIHHSLENIRRSIRHVRSSKVNLQKFSELCKRAGMIFKNLPP-DIPCHWNTT 439
             IV +GL+ I   + NIR S++++R S+   +KF ++ +  G+  ++ P  D+   WN+T
Sbjct: 264  LIVKDGLQAIDGVINNIRESVKYIRGSQSRKEKFEDIIEELGIRCRSAPQIDVANRWNST 323

Query: 438  YYMLDAAIPYQRIF-ELFFYDSIHDFIPSIIDWKNATVMRDLLKAFCESSKLFSGISNVS 262
            Y M+ +A+P++  F EL   DS + + PS  DW+ A  +  LLK F +++K+ SG +  +
Sbjct: 324  YDMIQSAMPFKDAFLELKVKDSNYTYCPSSQDWQRANAVCKLLKVFKKATKVVSGSTYPT 383

Query: 261  SSKFCHQLSNICLILSK--YENDSSCRGVVGSMKSKLSEYWREIPLVLGLAACMDPRYKL 88
            S+ + HQ+ ++  +L +  +  + +   +V  M++K  +YW    L   +   +DPR+K 
Sbjct: 384  SNLYFHQIWSVRQVLEEEAFSPNETIAAMVLEMQAKFDKYWMISYLTNCVPVVLDPRFKF 443

Query: 87   TFLEVCLEVICG-YEETHRLGGVVEKIK 7
             F+E  L+   G +   H L  V + I+
Sbjct: 444  GFIEFRLKQAFGQHGSVHHLDKVDQAIR 471


>gb|AEF33496.1| putative transposase [Saccharum hybrid cultivar R570]
          Length = 607

 Score =  252 bits (644), Expect = 1e-64
 Identities = 137/449 (30%), Positives = 256/449 (57%), Gaps = 9/449 (2%)
 Frame = -3

Query: 1326 KARCRYCRKLMSCVASNGTSHLRRHTESCLSK-NTHSIRPE-QVTTTPPGEVVVNSPFDQ 1153
            + RC++C ++ +   ++GTSH+RRH E C  +   H    + Q + T    ++ N  FD 
Sbjct: 27   QGRCKHCYEVFAAARTSGTSHMRRHLEICEPRLKMHDFVDKLQSSVTTKSAILTNWRFDP 86

Query: 1152 ARACRDTAKLVIELELPFSWAEDSHFEEWVHSFNPHLEPISRHTIKDIVLEKFEEEKSVL 973
                 +  +L++  ELPFS+ E   F  +  S NP  E +SR TIK+  LE ++  ++ L
Sbjct: 87   KLTRCELVRLIVLHELPFSFVEYDEFRSYSASLNPLAETVSRTTIKENYLEAYKNHRTTL 146

Query: 972  RSLLQSISGKVCLTSTLWTTDQSMGYVCITAHFVDQDWKLNKRTVSFPMPEYPNTEFTIF 793
            R + ++ + +  LT+ LWT++Q++GY+C+T H++D DWK+ KR + F + + P+  F ++
Sbjct: 147  REMFENCNFRFSLTADLWTSNQNIGYMCVTCHYIDDDWKVRKRIIRFCVVKTPHDGFNLY 206

Query: 792  EAIYSSILSWNLSEKVFTITLDDDISTDVTRRL--KDLLFTNNHSLGKQLFHVRCSTYIL 619
             ++  +I  +N+ +K+F+ITLD+  + +    +   +LL  +       LFH+RC+ +++
Sbjct: 207  TSMLRTIKFYNIEDKLFSITLDNAATNNTMMDILKANLLKMDMLHCDGDLFHIRCAAHVI 266

Query: 618  NKIVDEGLEGIHHSLENIRRSIRHVRSSKVNLQKFSELCKRAGMIFKNLPP-DIPCHWNT 442
            N IV +GL+ I   + NIR S+++VR+S+   +KF ++    G+  +++P  D+   WN+
Sbjct: 267  NLIVKDGLQAIDGVINNIRESVKYVRASQSRKEKFEDIVVELGIRCRSVPKIDVENRWNS 326

Query: 441  TYYMLDAAIPYQRIF-ELFFYDSIHDFIPSIIDWKNATVMRDLLKAFCESSKLFSGISNV 265
            T  M+++A+P++  F EL   DS + + PS  DW+ A  +  LLK F ++ ++ SG S  
Sbjct: 327  TCDMIESAMPFKEAFLELKVKDSNYSYCPSSQDWERANAVCKLLKVFKKAMEVVSGTSYP 386

Query: 264  SSSKFCHQLSNICLILSK--YENDSSCRGVVGSMKSKLSEYWREIPLVLGLAACMDPRYK 91
            +S+ + H++ +I  +L +  +  + +   +V  M++K  +YW    L   +   +DPR+K
Sbjct: 387  TSNLYFHEIWSIKQVLEEEAFSPNETIVTMVSEMQAKFDKYWMISYLTNCVPVILDPRFK 446

Query: 90   LTFLEVCLEVICG-YEETHRLGGVVEKIK 7
              F+E  L+   G Y     L  V + I+
Sbjct: 447  FGFIEFRLKQAFGEYGSVQHLDKVDQAIR 475


>ref|NP_001060325.2| Os07g0624100 [Oryza sativa Japonica Group]
            gi|255677983|dbj|BAF22239.2| Os07g0624100 [Oryza sativa
            Japonica Group]
          Length = 762

 Score =  237 bits (605), Expect = 4e-60
 Identities = 133/446 (29%), Positives = 239/446 (53%), Gaps = 9/446 (2%)
 Frame = -3

Query: 1320 RCRYCRKLMSCVASNGTSHLRRHTESCLSKNT--HSIRPEQVTTTPPGEV-VVNSPFDQA 1150
            +C++C   +      GTS LR+H   C  + +    +     T   P  V + N  FD  
Sbjct: 143  KCKHCDTEIRAKRGAGTSSLRKHLTRCKKRISALKIVGNLDFTLMSPNSVRLKNWSFDPE 202

Query: 1149 RACRDTAKLVIELELPFSWAEDSHFEEWVHSFNPHLEPISRHTIKDIVLEKFEEEKSVLR 970
             + ++  ++++  ELPF + E   F  +  S NP+ + ISR TI++  +  F+E+K  ++
Sbjct: 203  VSRKELMRMIVLHELPFQFVEYDGFRSFAASLNPYFKIISRTTIRNDCIAAFKEQKLAMK 262

Query: 969  SLLQSISGKVCLTSTLWTTDQSMGYVCITAHFVDQDWKLNKRTVSFPMPEYPNTEFTIFE 790
             + +  + +  LT+ +WT++Q+MGY+C+T HF+D DW++ KR + F   + P+T   +F 
Sbjct: 263  DMFKGANCRFSLTADMWTSNQTMGYMCVTCHFIDTDWRVQKRIIKFFGVKTPHTGVQMFN 322

Query: 789  AIYSSILSWNLSEKVFTITLDDDISTDVTRRLK--DLLFTNNHSLGKQLFHVRCSTYILN 616
            A+ S I  WN+++K+F++TLD+  + D   +L   +L        G +L H RC  +++N
Sbjct: 323  AMLSCIQDWNIADKIFSVTLDNASANDSMAKLLKCNLKAKKTIPAGGKLLHNRCVAHVIN 382

Query: 615  KIVDEGLEGIHHSLENIRRSIRHVRSSKVNLQKFSELCKRAGMIFKNLPP-DIPCHWNTT 439
             I  +GL+ I   + NIR S++++ +S    +KF E+  + G+  +  P  D+  HWN+T
Sbjct: 383  LIAKDGLKVIDSIVCNIRESVKYMDNSPSRKEKFEEIIAQEGITCELHPTVDVCTHWNST 442

Query: 438  YYMLDAAIPYQRIF-ELFFYDSIHDFIPSIIDWKNATVMRDLLKAFCESSKLFSGISNVS 262
            Y ML+AA P+ R +  L   +  + + PS   W+ AT++  +LK   +++ + SG    +
Sbjct: 443  YLMLNAAFPFMRAYASLVVQEKNYKYAPSPDQWERATIVSGILKVLYDATMVVSGSLYPT 502

Query: 261  SSKFCHQLSNICLILSK--YENDSSCRGVVGSMKSKLSEYWREIPLVLGLAACMDPRYKL 88
            S+ + H++  I L+L K    ND+    +V  MK K  +YW +    L +    DPR+K 
Sbjct: 503  SNLYFHEMWKIKLVLDKERSNNDTEVASMVKKMKDKFDKYWLKSYKYLCIPVIFDPRFKF 562

Query: 87   TFLEVCLEVICGYEETHRLGGVVEKI 10
             F+E  L    G     R+  V +++
Sbjct: 563  KFVEFRLGQAFGENAKERIDKVKKRM 588


>gb|AAO18461.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 669

 Score =  234 bits (598), Expect = 3e-59
 Identities = 132/447 (29%), Positives = 239/447 (53%), Gaps = 10/447 (2%)
 Frame = -3

Query: 1320 RCRYCRKLMSCVASNGTSHLRRHTESCLSKNTHSIRP----EQVTTTPPGEVVVNSPFDQ 1153
            +C++C   +      GTS LR+H   C  K   +++     +    +P    + N  FD 
Sbjct: 180  KCKHCDTEIRAKRGAGTSSLRKHLTRC-KKRISALKIVGNLDSTLMSPNSVRLKNWSFDP 238

Query: 1152 ARACRDTAKLVIELELPFSWAEDSHFEEWVHSFNPHLEPISRHTIKDIVLEKFEEEKSVL 973
              + ++  ++++  ELPF + E   F  +  S NP+ + ISR TI++  +  F+E+K  +
Sbjct: 239  EVSRKELMRMIVLHELPFQFVEYDGFRSFAASLNPYFKIISRTTIRNDCIAAFKEQKLAM 298

Query: 972  RSLLQSISGKVCLTSTLWTTDQSMGYVCITAHFVDQDWKLNKRTVSFPMPEYPNTEFTIF 793
            + + +  + +  LT+ +WT++Q+MGY+C+T HF+D DW++ KR + F   + P+T   +F
Sbjct: 299  KDMFKGANCRFSLTADMWTSNQTMGYMCVTCHFIDTDWRVQKRIIKFFGVKTPHTGVQMF 358

Query: 792  EAIYSSILSWNLSEKVFTITLDDDISTDVTRRLK--DLLFTNNHSLGKQLFHVRCSTYIL 619
             A+ S I  WN+++K+F++TLD   + D   +L   +L        G +L H RC+T+++
Sbjct: 359  NAMLSCIQDWNIADKIFSVTLDYASANDSMAKLLKCNLKAKKTIPAGGKLLHNRCATHVI 418

Query: 618  NKIVDEGLEGIHHSLENIRRSIRHVRSSKVNLQKFSELCKRAGMIFKNLPP-DIPCHWNT 442
            N I  +GL+ I   + NIR S+++  +S    +KF E+  + G+  +  P  D+   WN+
Sbjct: 419  NLIAKDGLKVIDSIVCNIRESVKYRDNSLSRKEKFEEIIAQEGITCELHPTVDVCTRWNS 478

Query: 441  TYYMLDAAIPYQRIF-ELFFYDSIHDFIPSIIDWKNATVMRDLLKAFCESSKLFSGISNV 265
            TY ML+AA P+ R +  L   D  + + PS   W+ +T++  +LK   +++ + SG    
Sbjct: 479  TYLMLNAAFPFMRAYASLAVQDKNYKYAPSPDQWERSTIVSGILKVLYDATMVVSGSLYP 538

Query: 264  SSSKFCHQLSNICLILSK--YENDSSCRGVVGSMKSKLSEYWREIPLVLGLAACMDPRYK 91
            +S+ + H++  I L+L K    ND+    +V  MK K  +YW +    L +    DPR+K
Sbjct: 539  TSNLYFHEMWKIKLVLDKEHSNNDTEVASMVQKMKDKFDKYWLKSYKYLCIPVIFDPRFK 598

Query: 90   LTFLEVCLEVICGYEETHRLGGVVEKI 10
              F+E  L    G     R+  V +++
Sbjct: 599  FNFVEFRLGQAFGENAKERIDKVKKRM 625


>ref|NP_001051732.2| Os03g0822100 [Oryza sativa Japonica Group]
            gi|108711807|gb|ABF99602.1| BED zinc finger family
            protein, expressed [Oryza sativa Japonica Group]
            gi|108711808|gb|ABF99603.1| BED zinc finger family
            protein, expressed [Oryza sativa Japonica Group]
            gi|215704882|dbj|BAG94910.1| unnamed protein product
            [Oryza sativa Japonica Group]
            gi|255675011|dbj|BAF13646.2| Os03g0822100 [Oryza sativa
            Japonica Group]
          Length = 612

 Score =  234 bits (598), Expect = 3e-59
 Identities = 132/447 (29%), Positives = 239/447 (53%), Gaps = 10/447 (2%)
 Frame = -3

Query: 1320 RCRYCRKLMSCVASNGTSHLRRHTESCLSKNTHSIRP----EQVTTTPPGEVVVNSPFDQ 1153
            +C++C   +      GTS LR+H   C  K   +++     +    +P    + N  FD 
Sbjct: 123  KCKHCDTEIRAKRGAGTSSLRKHLTRC-KKRISALKIVGNLDSTLMSPNSVRLKNWSFDP 181

Query: 1152 ARACRDTAKLVIELELPFSWAEDSHFEEWVHSFNPHLEPISRHTIKDIVLEKFEEEKSVL 973
              + ++  ++++  ELPF + E   F  +  S NP+ + ISR TI++  +  F+E+K  +
Sbjct: 182  EVSRKELMRMIVLHELPFQFVEYDGFRSFAASLNPYFKIISRTTIRNDCIAAFKEQKLAM 241

Query: 972  RSLLQSISGKVCLTSTLWTTDQSMGYVCITAHFVDQDWKLNKRTVSFPMPEYPNTEFTIF 793
            + + +  + +  LT+ +WT++Q+MGY+C+T HF+D DW++ KR + F   + P+T   +F
Sbjct: 242  KDMFKGANCRFSLTADMWTSNQTMGYMCVTCHFIDTDWRVQKRIIKFFGVKTPHTGVQMF 301

Query: 792  EAIYSSILSWNLSEKVFTITLDDDISTDVTRRLK--DLLFTNNHSLGKQLFHVRCSTYIL 619
             A+ S I  WN+++K+F++TLD   + D   +L   +L        G +L H RC+T+++
Sbjct: 302  NAMLSCIQDWNIADKIFSVTLDYASANDSMAKLLKCNLKAKKTIPAGGKLLHNRCATHVI 361

Query: 618  NKIVDEGLEGIHHSLENIRRSIRHVRSSKVNLQKFSELCKRAGMIFKNLPP-DIPCHWNT 442
            N I  +GL+ I   + NIR S+++  +S    +KF E+  + G+  +  P  D+   WN+
Sbjct: 362  NLIAKDGLKVIDSIVCNIRESVKYRDNSLSRKEKFEEIIAQEGITCELHPTVDVCTRWNS 421

Query: 441  TYYMLDAAIPYQRIF-ELFFYDSIHDFIPSIIDWKNATVMRDLLKAFCESSKLFSGISNV 265
            TY ML+AA P+ R +  L   D  + + PS   W+ +T++  +LK   +++ + SG    
Sbjct: 422  TYLMLNAAFPFMRAYASLAVQDKNYKYAPSPDQWERSTIVSGILKVLYDATMVVSGSLYP 481

Query: 264  SSSKFCHQLSNICLILSK--YENDSSCRGVVGSMKSKLSEYWREIPLVLGLAACMDPRYK 91
            +S+ + H++  I L+L K    ND+    +V  MK K  +YW +    L +    DPR+K
Sbjct: 482  TSNLYFHEMWKIKLVLDKEHSNNDTEVASMVQKMKDKFDKYWLKSYKYLCIPVIFDPRFK 541

Query: 90   LTFLEVCLEVICGYEETHRLGGVVEKI 10
              F+E  L    G     R+  V +++
Sbjct: 542  FNFVEFRLGQAFGENAKERIDKVKKRM 568


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