BLASTX nr result
ID: Coptis24_contig00013926
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00013926
(1343 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002451486.1| hypothetical protein SORBIDRAFT_04g002725 [S... 260 6e-67
gb|AEF33496.1| putative transposase [Saccharum hybrid cultivar R... 252 1e-64
ref|NP_001060325.2| Os07g0624100 [Oryza sativa Japonica Group] g... 237 4e-60
gb|AAO18461.1| hypothetical protein [Oryza sativa Japonica Group] 234 3e-59
ref|NP_001051732.2| Os03g0822100 [Oryza sativa Japonica Group] g... 234 3e-59
>ref|XP_002451486.1| hypothetical protein SORBIDRAFT_04g002725 [Sorghum bicolor]
gi|241931317|gb|EES04462.1| hypothetical protein
SORBIDRAFT_04g002725 [Sorghum bicolor]
Length = 604
Score = 260 bits (664), Expect = 6e-67
Identities = 137/448 (30%), Positives = 259/448 (57%), Gaps = 8/448 (1%)
Frame = -3
Query: 1326 KARCRYCRKLMSCVASNGTSHLRRHTESCLSK-NTHSIRPEQVTTTPPGEVVVNSPFDQA 1150
+ RC++C ++ + ++GTSH+RRH E+C + H + + + + V+ N FD
Sbjct: 24 QGRCKHCYEVFAAARTSGTSHMRRHLENCEPRLKMHDLVEKLQSVSTESAVLTNWRFDPK 83
Query: 1149 RACRDTAKLVIELELPFSWAEDSHFEEWVHSFNPHLEPISRHTIKDIVLEKFEEEKSVLR 970
+ +L++ ELPFS+ E F + S NP E +SR TIK+ +LE ++ ++ L+
Sbjct: 84 LTRCELVRLIVLHELPFSFVEYDGFRRYSASLNPLAETVSRTTIKENILEAYKNHRTALK 143
Query: 969 SLLQSISGKVCLTSTLWTTDQSMGYVCITAHFVDQDWKLNKRTVSFPMPEYPNTEFTIFE 790
+ ++ + + LT+ LWT++Q++GY+C+T H++D DWK+ KR + F + + P+ F ++
Sbjct: 144 EMFENCNFRFSLTADLWTSNQNIGYMCVTCHYIDDDWKVQKRIIKFCVVKTPHDGFNLYT 203
Query: 789 AIYSSILSWNLSEKVFTITLDDDISTDVTRRL--KDLLFTNNHSLGKQLFHVRCSTYILN 616
++ +I +N+ +K+F+ITLD+ S + + +LL + LFHVRC+ +++N
Sbjct: 204 SMLRTIRFYNIEDKLFSITLDNATSNNTMMDILKANLLKMDLLHCDGDLFHVRCAAHVIN 263
Query: 615 KIVDEGLEGIHHSLENIRRSIRHVRSSKVNLQKFSELCKRAGMIFKNLPP-DIPCHWNTT 439
IV +GL+ I + NIR S++++R S+ +KF ++ + G+ ++ P D+ WN+T
Sbjct: 264 LIVKDGLQAIDGVINNIRESVKYIRGSQSRKEKFEDIIEELGIRCRSAPQIDVANRWNST 323
Query: 438 YYMLDAAIPYQRIF-ELFFYDSIHDFIPSIIDWKNATVMRDLLKAFCESSKLFSGISNVS 262
Y M+ +A+P++ F EL DS + + PS DW+ A + LLK F +++K+ SG + +
Sbjct: 324 YDMIQSAMPFKDAFLELKVKDSNYTYCPSSQDWQRANAVCKLLKVFKKATKVVSGSTYPT 383
Query: 261 SSKFCHQLSNICLILSK--YENDSSCRGVVGSMKSKLSEYWREIPLVLGLAACMDPRYKL 88
S+ + HQ+ ++ +L + + + + +V M++K +YW L + +DPR+K
Sbjct: 384 SNLYFHQIWSVRQVLEEEAFSPNETIAAMVLEMQAKFDKYWMISYLTNCVPVVLDPRFKF 443
Query: 87 TFLEVCLEVICG-YEETHRLGGVVEKIK 7
F+E L+ G + H L V + I+
Sbjct: 444 GFIEFRLKQAFGQHGSVHHLDKVDQAIR 471
>gb|AEF33496.1| putative transposase [Saccharum hybrid cultivar R570]
Length = 607
Score = 252 bits (644), Expect = 1e-64
Identities = 137/449 (30%), Positives = 256/449 (57%), Gaps = 9/449 (2%)
Frame = -3
Query: 1326 KARCRYCRKLMSCVASNGTSHLRRHTESCLSK-NTHSIRPE-QVTTTPPGEVVVNSPFDQ 1153
+ RC++C ++ + ++GTSH+RRH E C + H + Q + T ++ N FD
Sbjct: 27 QGRCKHCYEVFAAARTSGTSHMRRHLEICEPRLKMHDFVDKLQSSVTTKSAILTNWRFDP 86
Query: 1152 ARACRDTAKLVIELELPFSWAEDSHFEEWVHSFNPHLEPISRHTIKDIVLEKFEEEKSVL 973
+ +L++ ELPFS+ E F + S NP E +SR TIK+ LE ++ ++ L
Sbjct: 87 KLTRCELVRLIVLHELPFSFVEYDEFRSYSASLNPLAETVSRTTIKENYLEAYKNHRTTL 146
Query: 972 RSLLQSISGKVCLTSTLWTTDQSMGYVCITAHFVDQDWKLNKRTVSFPMPEYPNTEFTIF 793
R + ++ + + LT+ LWT++Q++GY+C+T H++D DWK+ KR + F + + P+ F ++
Sbjct: 147 REMFENCNFRFSLTADLWTSNQNIGYMCVTCHYIDDDWKVRKRIIRFCVVKTPHDGFNLY 206
Query: 792 EAIYSSILSWNLSEKVFTITLDDDISTDVTRRL--KDLLFTNNHSLGKQLFHVRCSTYIL 619
++ +I +N+ +K+F+ITLD+ + + + +LL + LFH+RC+ +++
Sbjct: 207 TSMLRTIKFYNIEDKLFSITLDNAATNNTMMDILKANLLKMDMLHCDGDLFHIRCAAHVI 266
Query: 618 NKIVDEGLEGIHHSLENIRRSIRHVRSSKVNLQKFSELCKRAGMIFKNLPP-DIPCHWNT 442
N IV +GL+ I + NIR S+++VR+S+ +KF ++ G+ +++P D+ WN+
Sbjct: 267 NLIVKDGLQAIDGVINNIRESVKYVRASQSRKEKFEDIVVELGIRCRSVPKIDVENRWNS 326
Query: 441 TYYMLDAAIPYQRIF-ELFFYDSIHDFIPSIIDWKNATVMRDLLKAFCESSKLFSGISNV 265
T M+++A+P++ F EL DS + + PS DW+ A + LLK F ++ ++ SG S
Sbjct: 327 TCDMIESAMPFKEAFLELKVKDSNYSYCPSSQDWERANAVCKLLKVFKKAMEVVSGTSYP 386
Query: 264 SSSKFCHQLSNICLILSK--YENDSSCRGVVGSMKSKLSEYWREIPLVLGLAACMDPRYK 91
+S+ + H++ +I +L + + + + +V M++K +YW L + +DPR+K
Sbjct: 387 TSNLYFHEIWSIKQVLEEEAFSPNETIVTMVSEMQAKFDKYWMISYLTNCVPVILDPRFK 446
Query: 90 LTFLEVCLEVICG-YEETHRLGGVVEKIK 7
F+E L+ G Y L V + I+
Sbjct: 447 FGFIEFRLKQAFGEYGSVQHLDKVDQAIR 475
>ref|NP_001060325.2| Os07g0624100 [Oryza sativa Japonica Group]
gi|255677983|dbj|BAF22239.2| Os07g0624100 [Oryza sativa
Japonica Group]
Length = 762
Score = 237 bits (605), Expect = 4e-60
Identities = 133/446 (29%), Positives = 239/446 (53%), Gaps = 9/446 (2%)
Frame = -3
Query: 1320 RCRYCRKLMSCVASNGTSHLRRHTESCLSKNT--HSIRPEQVTTTPPGEV-VVNSPFDQA 1150
+C++C + GTS LR+H C + + + T P V + N FD
Sbjct: 143 KCKHCDTEIRAKRGAGTSSLRKHLTRCKKRISALKIVGNLDFTLMSPNSVRLKNWSFDPE 202
Query: 1149 RACRDTAKLVIELELPFSWAEDSHFEEWVHSFNPHLEPISRHTIKDIVLEKFEEEKSVLR 970
+ ++ ++++ ELPF + E F + S NP+ + ISR TI++ + F+E+K ++
Sbjct: 203 VSRKELMRMIVLHELPFQFVEYDGFRSFAASLNPYFKIISRTTIRNDCIAAFKEQKLAMK 262
Query: 969 SLLQSISGKVCLTSTLWTTDQSMGYVCITAHFVDQDWKLNKRTVSFPMPEYPNTEFTIFE 790
+ + + + LT+ +WT++Q+MGY+C+T HF+D DW++ KR + F + P+T +F
Sbjct: 263 DMFKGANCRFSLTADMWTSNQTMGYMCVTCHFIDTDWRVQKRIIKFFGVKTPHTGVQMFN 322
Query: 789 AIYSSILSWNLSEKVFTITLDDDISTDVTRRLK--DLLFTNNHSLGKQLFHVRCSTYILN 616
A+ S I WN+++K+F++TLD+ + D +L +L G +L H RC +++N
Sbjct: 323 AMLSCIQDWNIADKIFSVTLDNASANDSMAKLLKCNLKAKKTIPAGGKLLHNRCVAHVIN 382
Query: 615 KIVDEGLEGIHHSLENIRRSIRHVRSSKVNLQKFSELCKRAGMIFKNLPP-DIPCHWNTT 439
I +GL+ I + NIR S++++ +S +KF E+ + G+ + P D+ HWN+T
Sbjct: 383 LIAKDGLKVIDSIVCNIRESVKYMDNSPSRKEKFEEIIAQEGITCELHPTVDVCTHWNST 442
Query: 438 YYMLDAAIPYQRIF-ELFFYDSIHDFIPSIIDWKNATVMRDLLKAFCESSKLFSGISNVS 262
Y ML+AA P+ R + L + + + PS W+ AT++ +LK +++ + SG +
Sbjct: 443 YLMLNAAFPFMRAYASLVVQEKNYKYAPSPDQWERATIVSGILKVLYDATMVVSGSLYPT 502
Query: 261 SSKFCHQLSNICLILSK--YENDSSCRGVVGSMKSKLSEYWREIPLVLGLAACMDPRYKL 88
S+ + H++ I L+L K ND+ +V MK K +YW + L + DPR+K
Sbjct: 503 SNLYFHEMWKIKLVLDKERSNNDTEVASMVKKMKDKFDKYWLKSYKYLCIPVIFDPRFKF 562
Query: 87 TFLEVCLEVICGYEETHRLGGVVEKI 10
F+E L G R+ V +++
Sbjct: 563 KFVEFRLGQAFGENAKERIDKVKKRM 588
>gb|AAO18461.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 669
Score = 234 bits (598), Expect = 3e-59
Identities = 132/447 (29%), Positives = 239/447 (53%), Gaps = 10/447 (2%)
Frame = -3
Query: 1320 RCRYCRKLMSCVASNGTSHLRRHTESCLSKNTHSIRP----EQVTTTPPGEVVVNSPFDQ 1153
+C++C + GTS LR+H C K +++ + +P + N FD
Sbjct: 180 KCKHCDTEIRAKRGAGTSSLRKHLTRC-KKRISALKIVGNLDSTLMSPNSVRLKNWSFDP 238
Query: 1152 ARACRDTAKLVIELELPFSWAEDSHFEEWVHSFNPHLEPISRHTIKDIVLEKFEEEKSVL 973
+ ++ ++++ ELPF + E F + S NP+ + ISR TI++ + F+E+K +
Sbjct: 239 EVSRKELMRMIVLHELPFQFVEYDGFRSFAASLNPYFKIISRTTIRNDCIAAFKEQKLAM 298
Query: 972 RSLLQSISGKVCLTSTLWTTDQSMGYVCITAHFVDQDWKLNKRTVSFPMPEYPNTEFTIF 793
+ + + + + LT+ +WT++Q+MGY+C+T HF+D DW++ KR + F + P+T +F
Sbjct: 299 KDMFKGANCRFSLTADMWTSNQTMGYMCVTCHFIDTDWRVQKRIIKFFGVKTPHTGVQMF 358
Query: 792 EAIYSSILSWNLSEKVFTITLDDDISTDVTRRLK--DLLFTNNHSLGKQLFHVRCSTYIL 619
A+ S I WN+++K+F++TLD + D +L +L G +L H RC+T+++
Sbjct: 359 NAMLSCIQDWNIADKIFSVTLDYASANDSMAKLLKCNLKAKKTIPAGGKLLHNRCATHVI 418
Query: 618 NKIVDEGLEGIHHSLENIRRSIRHVRSSKVNLQKFSELCKRAGMIFKNLPP-DIPCHWNT 442
N I +GL+ I + NIR S+++ +S +KF E+ + G+ + P D+ WN+
Sbjct: 419 NLIAKDGLKVIDSIVCNIRESVKYRDNSLSRKEKFEEIIAQEGITCELHPTVDVCTRWNS 478
Query: 441 TYYMLDAAIPYQRIF-ELFFYDSIHDFIPSIIDWKNATVMRDLLKAFCESSKLFSGISNV 265
TY ML+AA P+ R + L D + + PS W+ +T++ +LK +++ + SG
Sbjct: 479 TYLMLNAAFPFMRAYASLAVQDKNYKYAPSPDQWERSTIVSGILKVLYDATMVVSGSLYP 538
Query: 264 SSSKFCHQLSNICLILSK--YENDSSCRGVVGSMKSKLSEYWREIPLVLGLAACMDPRYK 91
+S+ + H++ I L+L K ND+ +V MK K +YW + L + DPR+K
Sbjct: 539 TSNLYFHEMWKIKLVLDKEHSNNDTEVASMVQKMKDKFDKYWLKSYKYLCIPVIFDPRFK 598
Query: 90 LTFLEVCLEVICGYEETHRLGGVVEKI 10
F+E L G R+ V +++
Sbjct: 599 FNFVEFRLGQAFGENAKERIDKVKKRM 625
>ref|NP_001051732.2| Os03g0822100 [Oryza sativa Japonica Group]
gi|108711807|gb|ABF99602.1| BED zinc finger family
protein, expressed [Oryza sativa Japonica Group]
gi|108711808|gb|ABF99603.1| BED zinc finger family
protein, expressed [Oryza sativa Japonica Group]
gi|215704882|dbj|BAG94910.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|255675011|dbj|BAF13646.2| Os03g0822100 [Oryza sativa
Japonica Group]
Length = 612
Score = 234 bits (598), Expect = 3e-59
Identities = 132/447 (29%), Positives = 239/447 (53%), Gaps = 10/447 (2%)
Frame = -3
Query: 1320 RCRYCRKLMSCVASNGTSHLRRHTESCLSKNTHSIRP----EQVTTTPPGEVVVNSPFDQ 1153
+C++C + GTS LR+H C K +++ + +P + N FD
Sbjct: 123 KCKHCDTEIRAKRGAGTSSLRKHLTRC-KKRISALKIVGNLDSTLMSPNSVRLKNWSFDP 181
Query: 1152 ARACRDTAKLVIELELPFSWAEDSHFEEWVHSFNPHLEPISRHTIKDIVLEKFEEEKSVL 973
+ ++ ++++ ELPF + E F + S NP+ + ISR TI++ + F+E+K +
Sbjct: 182 EVSRKELMRMIVLHELPFQFVEYDGFRSFAASLNPYFKIISRTTIRNDCIAAFKEQKLAM 241
Query: 972 RSLLQSISGKVCLTSTLWTTDQSMGYVCITAHFVDQDWKLNKRTVSFPMPEYPNTEFTIF 793
+ + + + + LT+ +WT++Q+MGY+C+T HF+D DW++ KR + F + P+T +F
Sbjct: 242 KDMFKGANCRFSLTADMWTSNQTMGYMCVTCHFIDTDWRVQKRIIKFFGVKTPHTGVQMF 301
Query: 792 EAIYSSILSWNLSEKVFTITLDDDISTDVTRRLK--DLLFTNNHSLGKQLFHVRCSTYIL 619
A+ S I WN+++K+F++TLD + D +L +L G +L H RC+T+++
Sbjct: 302 NAMLSCIQDWNIADKIFSVTLDYASANDSMAKLLKCNLKAKKTIPAGGKLLHNRCATHVI 361
Query: 618 NKIVDEGLEGIHHSLENIRRSIRHVRSSKVNLQKFSELCKRAGMIFKNLPP-DIPCHWNT 442
N I +GL+ I + NIR S+++ +S +KF E+ + G+ + P D+ WN+
Sbjct: 362 NLIAKDGLKVIDSIVCNIRESVKYRDNSLSRKEKFEEIIAQEGITCELHPTVDVCTRWNS 421
Query: 441 TYYMLDAAIPYQRIF-ELFFYDSIHDFIPSIIDWKNATVMRDLLKAFCESSKLFSGISNV 265
TY ML+AA P+ R + L D + + PS W+ +T++ +LK +++ + SG
Sbjct: 422 TYLMLNAAFPFMRAYASLAVQDKNYKYAPSPDQWERSTIVSGILKVLYDATMVVSGSLYP 481
Query: 264 SSSKFCHQLSNICLILSK--YENDSSCRGVVGSMKSKLSEYWREIPLVLGLAACMDPRYK 91
+S+ + H++ I L+L K ND+ +V MK K +YW + L + DPR+K
Sbjct: 482 TSNLYFHEMWKIKLVLDKEHSNNDTEVASMVQKMKDKFDKYWLKSYKYLCIPVIFDPRFK 541
Query: 90 LTFLEVCLEVICGYEETHRLGGVVEKI 10
F+E L G R+ V +++
Sbjct: 542 FNFVEFRLGQAFGENAKERIDKVKKRM 568