BLASTX nr result

ID: Coptis24_contig00013925 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013925
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281644.1| PREDICTED: uncharacterized protein LOC100252...    79   6e-13
emb|CAN65462.1| hypothetical protein VITISV_002198 [Vitis vinifera]    74   2e-11
ref|XP_002527549.1| conserved hypothetical protein [Ricinus comm...    73   4e-11
ref|XP_002315841.1| predicted protein [Populus trichocarpa] gi|2...    69   6e-10
ref|XP_003524142.1| PREDICTED: uncharacterized protein LOC100809...    59   8e-07

>ref|XP_002281644.1| PREDICTED: uncharacterized protein LOC100252594 [Vitis vinifera]
          Length = 698

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 60/170 (35%), Positives = 74/170 (43%), Gaps = 5/170 (2%)
 Frame = -2

Query: 586  TTGVLPMP-PIHQQHLPPPNSMQLMFITSXXXXXXXXXXXXXXXXASSGWAAVXXXXXXX 410
            TTGVLP P P  +  LPPPN MQ +F+T+                 S GW A        
Sbjct: 533  TTGVLPAPAPPMRPQLPPPNGMQPLFVTTAVAPAMPFPAPVPLPTGSPGWPAAPPRHPPP 592

Query: 409  XXXXXPGTGVFLXXXXXXXXXXXXXXXXXXAIPVNSVVETLSSLQKENGLESFNCNSNT- 233
                  GTGVFL                      ++ VET +  +KENG    + NSNT 
Sbjct: 593  RLPVP-GTGVFLPPPGSGNSSSPQHISTEA---TSTSVETAAPTEKENGSGKSSSNSNTV 648

Query: 232  SPKSKLDAKAQSQECNGS---SGIHFGGTMLEEQQKDGIENLGSKAMGAI 92
            SPK KLD K   QECNGS   +G+       EEQQ +    + SK  GA+
Sbjct: 649  SPKGKLDGKVHRQECNGSMDETGVDERAVTKEEQQHNDELKVASKPAGAV 698


>emb|CAN65462.1| hypothetical protein VITISV_002198 [Vitis vinifera]
          Length = 1145

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 57/155 (36%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
 Frame = -2

Query: 586 TTGVLPMP-PIHQQHLPPPNSMQLMFITSXXXXXXXXXXXXXXXXASSGWAAVXXXXXXX 410
           TTGVLP P P  +  LPPPN MQ +F+T+                 S GW A        
Sbjct: 546 TTGVLPAPAPPMRPQLPPPNGMQPLFVTTAVAPAMPFPAPXPLPTGSPGWPAAPPRHPPP 605

Query: 409 XXXXXPGTGVFLXXXXXXXXXXXXXXXXXXAIPVNSVVETLSSLQKENGLESFNCNSNT- 233
                 GTGVFL                      ++ VET +  +KENG    + NSNT 
Sbjct: 606 RLPVP-GTGVFLPPPGSGNSSSPQHISTEA---TSTSVETAAPTEKENGSGKSSSNSNTV 661

Query: 232 SPKSKLDAKAQSQECNGS---SGIHFGGTMLEEQQ 137
           SPK KLD K   QECNGS   +G+       EEQQ
Sbjct: 662 SPKGKLDGKVHRQECNGSMDETGVDERAVTKEEQQ 696


>ref|XP_002527549.1| conserved hypothetical protein [Ricinus communis]
           gi|223533099|gb|EEF34858.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 697

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 53/150 (35%), Positives = 65/150 (43%)
 Frame = -2

Query: 586 TTGVLPMPPIHQQHLPPPNSMQLMFITSXXXXXXXXXXXXXXXXASSGWAAVXXXXXXXX 407
           TTGVLP P I  Q + PPN +Q +F+T+                 S+GW A         
Sbjct: 539 TTGVLPAPSIRPQ-IAPPNGVQPLFVTAPVAAPMPFPAPVPMPPVSTGWPAAPRHPPNRL 597

Query: 406 XXXXPGTGVFLXXXXXXXXXXXXXXXXXXAIPVNSVVETLSSLQKENGLESFNCNSNTSP 227
               PGTGVFL                     +N   ET S   KENGL   N  +  SP
Sbjct: 598 PVPVPGTGVFLPPPGSGNASSPQIPNATE---INFPAETASLQDKENGLGKSNHGTCASP 654

Query: 226 KSKLDAKAQSQECNGSSGIHFGGTMLEEQQ 137
           K KL+AK+Q Q+CNG +     GT  E QQ
Sbjct: 655 KEKLEAKSQKQDCNGITD-GKAGTKEEHQQ 683


>ref|XP_002315841.1| predicted protein [Populus trichocarpa] gi|222864881|gb|EEF02012.1|
            predicted protein [Populus trichocarpa]
          Length = 699

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 54/166 (32%), Positives = 75/166 (45%), Gaps = 1/166 (0%)
 Frame = -2

Query: 586  TTGVLPMPPIHQQHLPPPNSMQLMFITSXXXXXXXXXXXXXXXXASSGW-AAVXXXXXXX 410
            T GVLP+PPI  Q +PPPN +Q +F+T+                 S+GW  A        
Sbjct: 543  TAGVLPVPPIRPQ-IPPPNGVQPIFMTTTVPFPAPVPIPPV----STGWLTASPRHPSAR 597

Query: 409  XXXXXPGTGVFLXXXXXXXXXXXXXXXXXXAIPVNSVVETLSSLQKENGLESFNCNSNTS 230
                 PGTGVFL                     +N   ET S  +KENGL   NC+++ S
Sbjct: 598  LPVPIPGTGVFLPPPGSGNASSPLQLSTAAT-EMNFHTETASLPEKENGLGKSNCDTSAS 656

Query: 229  PKSKLDAKAQSQECNGSSGIHFGGTMLEEQQKDGIENLGSKAMGAI 92
            PK KL  K Q  +CN   GI  G  + +E+Q+     +  ++ GA+
Sbjct: 657  PKEKLAEKTQRLDCN---GILDGRAVKKEEQQSVNHTVADQSAGAV 699


>ref|XP_003524142.1| PREDICTED: uncharacterized protein LOC100809865 [Glycine max]
          Length = 681

 Score = 58.5 bits (140), Expect = 8e-07
 Identities = 48/147 (32%), Positives = 62/147 (42%)
 Frame = -2

Query: 586 TTGVLPMPPIHQQHLPPPNSMQLMFITSXXXXXXXXXXXXXXXXASSGWAAVXXXXXXXX 407
           TTGVLP PPI  Q +  P  MQ +F+T+                 S+GW           
Sbjct: 529 TTGVLPSPPIRPQ-MAAPVGMQPLFVTAPVVPPMPFPAPVAFPPGSTGWTGAPPPRHPPP 587

Query: 406 XXXXPGTGVFLXXXXXXXXXXXXXXXXXXAIPVNSVVETLSSLQKENGLESFNCNSNTSP 227
               PGTGVFL                     VN   ET + L+KENG  + N +++ SP
Sbjct: 588 RVPAPGTGVFL--PPPGSGNSSQQLPAGTLAEVNPSTETPTMLEKENGKTNHN-STSASP 644

Query: 226 KSKLDAKAQSQECNGSSGIHFGGTMLE 146
           K K+    Q QECNG +     GT +E
Sbjct: 645 KGKV----QKQECNGHAA---DGTQVE 664


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