BLASTX nr result
ID: Coptis24_contig00013924
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00013924
(1152 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002320771.1| predicted protein [Populus trichocarpa] gi|2... 416 e-138
emb|CBI28665.3| unnamed protein product [Vitis vinifera] 404 e-135
ref|XP_002268533.1| PREDICTED: uncharacterized protein LOC100267... 404 e-135
ref|XP_002892037.1| SET domain-containing protein [Arabidopsis l... 385 e-128
ref|NP_001030933.1| SET domain-containing protein [Arabidopsis t... 382 e-128
>ref|XP_002320771.1| predicted protein [Populus trichocarpa] gi|222861544|gb|EEE99086.1|
predicted protein [Populus trichocarpa]
Length = 551
Score = 416 bits (1068), Expect(2) = e-138
Identities = 212/346 (61%), Positives = 254/346 (73%), Gaps = 24/346 (6%)
Frame = -2
Query: 968 LQKKNLQTVYEDKVKNLVLELL--DGELESEVQFKDFLWANSIFWTRALNIPFPHSYVFP 795
LQ+K L ++YEDKVK LV +LL DG+LESEV F+DFLWANS+FWTRALNIP P SYVFP
Sbjct: 125 LQRKRLLSLYEDKVKGLVQKLLILDGDLESEVCFEDFLWANSVFWTRALNIPLPRSYVFP 184
Query: 794 QAVEEKEGCPSFGKDSDASRMCGEVSSSLKDEKVGNRTDVASNSMHGESIWVEGLVPGID 615
Q E+++ S DS S + S K V + D E++WVEGLVPGID
Sbjct: 185 QVQEDQDSQSSLNIDSGVSHTKALLISGSKVPGVDGQFD--------ETVWVEGLVPGID 236
Query: 614 FCNHGLKAATTWEVDGSGSTTGVPASMYLLSAEKSPFQIDKEVYISYGNKGNEELLYLYG 435
FCNH LKA TWEVDG+G TTGVP SMYLLSAEK+PFQ++KE+ ISYGNKGNEELLYLYG
Sbjct: 237 FCNHDLKAVATWEVDGTGMTTGVPHSMYLLSAEKTPFQMEKEITISYGNKGNEELLYLYG 296
Query: 434 FVIDNNPDDYLMV----------------------HYPIEAFQSLPFADTKGRLLEIQKA 321
FVIDNNPD+YLMV HYP+EA Q++PF+D+K +LLE QKA
Sbjct: 297 FVIDNNPDEYLMVMPLFGFCNSDVVLLGQYFLLDVHYPVEAIQNVPFSDSKMQLLEAQKA 356
Query: 320 EMRCLLPKRLLNHGFFSGVPQQCEDRNTLSDDRICNYSWAGQRKMPSYSSKLVFPEDFVT 141
EMRCLLPKRLL HGFF +D D+IC++SW+GQR+MPSY++KLVFPE+F+T
Sbjct: 357 EMRCLLPKRLLAHGFFPAGTTSNDDNGKGKADKICSFSWSGQRRMPSYANKLVFPEEFLT 416
Query: 140 ALRTIAMKEEELHQASSLLEELVGSDEERQPSDTEVRAAIWEACGD 3
LRTIAM+E+EL +ASS LEELVGS+ RQP+DTEVR A+WEACGD
Sbjct: 417 TLRTIAMQEDELLKASSFLEELVGSEGVRQPTDTEVRTAVWEACGD 462
Score = 104 bits (260), Expect(2) = e-138
Identities = 46/58 (79%), Positives = 53/58 (91%)
Frame = -1
Query: 1152 MFQQGDVDDRFLIILFLTVERLRKNSAWKPYLDMLPTAFGNPLWFTDEEFLELKGTTL 979
MF++G+VDDRFL+ILFL +ERLR NS+WKPYLDMLP FGNPLWFTD+E LELKGTTL
Sbjct: 62 MFEEGEVDDRFLMILFLMLERLRNNSSWKPYLDMLPKTFGNPLWFTDDELLELKGTTL 119
>emb|CBI28665.3| unnamed protein product [Vitis vinifera]
Length = 565
Score = 404 bits (1037), Expect(2) = e-135
Identities = 213/339 (62%), Positives = 253/339 (74%), Gaps = 17/339 (5%)
Frame = -2
Query: 968 LQKKNLQTVYEDKVKNLVLELL--DGELESEVQFKDFLWANSIFWTRALNIPFPHSYVFP 795
LQKK LQ++Y+DKVK+LV +LL DG+ + EV F+DFLWANSIFWTRALNIP P SYVFP
Sbjct: 140 LQKKQLQSLYDDKVKDLVKKLLILDGDSKGEVHFEDFLWANSIFWTRALNIPLPRSYVFP 199
Query: 794 QAVEEKEGC-PSFGKDSDASRMCGEVSS----SLKDEKVGNRTDV----------ASNSM 660
Q EE+ C P+ KDS A ++SS S DEK TDV S+SM
Sbjct: 200 QIQEEQNSCIPNIIKDSGA--FTDQISSGNLVSGMDEK---STDVHGFESQVNRGTSSSM 254
Query: 659 HGESIWVEGLVPGIDFCNHGLKAATTWEVDGSGSTTGVPASMYLLSAEKSPFQIDKEVYI 480
E +WVEGLVPGIDFCNH LKAA TWEVD +G TGVP SMYLLS E+SP + KE+ I
Sbjct: 255 QEEILWVEGLVPGIDFCNHDLKAAATWEVDNTGLKTGVPLSMYLLSVEQSPCHMQKEISI 314
Query: 479 SYGNKGNEELLYLYGFVIDNNPDDYLMVHYPIEAFQSLPFADTKGRLLEIQKAEMRCLLP 300
SYGNKGNEELLYLYGFVIDNNPDDYLMVHYP+E F+++PF+++KG+LLE QKAEMRCLL
Sbjct: 315 SYGNKGNEELLYLYGFVIDNNPDDYLMVHYPMELFKNVPFSESKGQLLEAQKAEMRCLLH 374
Query: 299 KRLLNHGFFSGVPQQCEDRNTLSDDRICNYSWAGQRKMPSYSSKLVFPEDFVTALRTIAM 120
K LL+ GFF + E +D ++CNYSW+GQRK PSY +KLVFPE F+TALRTI+M
Sbjct: 375 KTLLDRGFFPASTLKNEQNGKSTDHQVCNYSWSGQRKTPSYLNKLVFPEAFLTALRTISM 434
Query: 119 KEEELHQASSLLEELVGSDEERQPSDTEVRAAIWEACGD 3
+E+EL + SSLLEEL S RQP D+E RAA+WEACGD
Sbjct: 435 EEDELSRVSSLLEELAESG-GRQPLDSETRAAVWEACGD 472
Score = 104 bits (259), Expect(2) = e-135
Identities = 45/58 (77%), Positives = 54/58 (93%)
Frame = -1
Query: 1152 MFQQGDVDDRFLIILFLTVERLRKNSAWKPYLDMLPTAFGNPLWFTDEEFLELKGTTL 979
MF++G+VDDR L+ILFLTVERLRKNS+WKPYLDMLPT FG PLWF D+EF+ELKGT++
Sbjct: 77 MFEEGEVDDRLLMILFLTVERLRKNSSWKPYLDMLPTTFGTPLWFIDDEFIELKGTSV 134
>ref|XP_002268533.1| PREDICTED: uncharacterized protein LOC100267311 [Vitis vinifera]
Length = 561
Score = 404 bits (1037), Expect(2) = e-135
Identities = 213/339 (62%), Positives = 253/339 (74%), Gaps = 17/339 (5%)
Frame = -2
Query: 968 LQKKNLQTVYEDKVKNLVLELL--DGELESEVQFKDFLWANSIFWTRALNIPFPHSYVFP 795
LQKK LQ++Y+DKVK+LV +LL DG+ + EV F+DFLWANSIFWTRALNIP P SYVFP
Sbjct: 140 LQKKQLQSLYDDKVKDLVKKLLILDGDSKGEVHFEDFLWANSIFWTRALNIPLPRSYVFP 199
Query: 794 QAVEEKEGC-PSFGKDSDASRMCGEVSS----SLKDEKVGNRTDV----------ASNSM 660
Q EE+ C P+ KDS A ++SS S DEK TDV S+SM
Sbjct: 200 QIQEEQNSCIPNIIKDSGA--FTDQISSGNLVSGMDEK---STDVHGFESQVNRGTSSSM 254
Query: 659 HGESIWVEGLVPGIDFCNHGLKAATTWEVDGSGSTTGVPASMYLLSAEKSPFQIDKEVYI 480
E +WVEGLVPGIDFCNH LKAA TWEVD +G TGVP SMYLLS E+SP + KE+ I
Sbjct: 255 QEEILWVEGLVPGIDFCNHDLKAAATWEVDNTGLKTGVPLSMYLLSVEQSPCHMQKEISI 314
Query: 479 SYGNKGNEELLYLYGFVIDNNPDDYLMVHYPIEAFQSLPFADTKGRLLEIQKAEMRCLLP 300
SYGNKGNEELLYLYGFVIDNNPDDYLMVHYP+E F+++PF+++KG+LLE QKAEMRCLL
Sbjct: 315 SYGNKGNEELLYLYGFVIDNNPDDYLMVHYPMELFKNVPFSESKGQLLEAQKAEMRCLLH 374
Query: 299 KRLLNHGFFSGVPQQCEDRNTLSDDRICNYSWAGQRKMPSYSSKLVFPEDFVTALRTIAM 120
K LL+ GFF + E +D ++CNYSW+GQRK PSY +KLVFPE F+TALRTI+M
Sbjct: 375 KTLLDRGFFPASTLKNEQNGKSTDHQVCNYSWSGQRKTPSYLNKLVFPEAFLTALRTISM 434
Query: 119 KEEELHQASSLLEELVGSDEERQPSDTEVRAAIWEACGD 3
+E+EL + SSLLEEL S RQP D+E RAA+WEACGD
Sbjct: 435 EEDELSRVSSLLEELAESG-GRQPLDSETRAAVWEACGD 472
Score = 104 bits (259), Expect(2) = e-135
Identities = 45/58 (77%), Positives = 54/58 (93%)
Frame = -1
Query: 1152 MFQQGDVDDRFLIILFLTVERLRKNSAWKPYLDMLPTAFGNPLWFTDEEFLELKGTTL 979
MF++G+VDDR L+ILFLTVERLRKNS+WKPYLDMLPT FG PLWF D+EF+ELKGT++
Sbjct: 77 MFEEGEVDDRLLMILFLTVERLRKNSSWKPYLDMLPTTFGTPLWFIDDEFIELKGTSV 134
>ref|XP_002892037.1| SET domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297337879|gb|EFH68296.1| SET domain-containing protein
[Arabidopsis lyrata subsp. lyrata]
Length = 548
Score = 385 bits (990), Expect(2) = e-128
Identities = 192/324 (59%), Positives = 241/324 (74%), Gaps = 2/324 (0%)
Frame = -2
Query: 968 LQKKNLQTVYEDKVKNLV--LELLDGELESEVQFKDFLWANSIFWTRALNIPFPHSYVFP 795
LQKKNL ++Y DKV+ LV L +LDG+ +S+V F+ FLWANS+FW+RALNIP PHS+VFP
Sbjct: 143 LQKKNLLSLYHDKVEVLVKNLLILDGDSQSKVSFEHFLWANSVFWSRALNIPLPHSFVFP 202
Query: 794 QAVEEKEGCPSFGKDSDASRMCGEVSSSLKDEKVGNRTDVASNSMHGESIWVEGLVPGID 615
Q+ ++ CPS + + V+S+ E+ GN + G++IWVEGLVPGID
Sbjct: 203 QSQDDIGECPSTSHSPETA----PVNSN---EEKGNLACNYNFMRSGDTIWVEGLVPGID 255
Query: 614 FCNHGLKAATTWEVDGSGSTTGVPASMYLLSAEKSPFQIDKEVYISYGNKGNEELLYLYG 435
FCNH LK TWEVDG+GS + VP SMYLLSA +KE+ ISYGNKGNEELLYLYG
Sbjct: 256 FCNHDLKPMATWEVDGTGSVSRVPFSMYLLSAVAQRLIPNKEISISYGNKGNEELLYLYG 315
Query: 434 FVIDNNPDDYLMVHYPIEAFQSLPFADTKGRLLEIQKAEMRCLLPKRLLNHGFFSGVPQQ 255
FVIDNNPDDYLMVHYP+EA +PF+D+KG+LLE Q A++RCLLPK +LNHGFF
Sbjct: 316 FVIDNNPDDYLMVHYPVEAIPIIPFSDSKGQLLEAQNAQLRCLLPKSVLNHGFFPQTTST 375
Query: 254 CEDRNTLSDDRICNYSWAGQRKMPSYSSKLVFPEDFVTALRTIAMKEEELHQASSLLEEL 75
+ + +R CN+SW+GQRKMPSY +KLVF EDF+T LRTIAM+EEE+++ S++LEEL
Sbjct: 376 IRESDEKETERSCNFSWSGQRKMPSYMNKLVFREDFMTGLRTIAMQEEEINKVSAMLEEL 435
Query: 74 VGSDEERQPSDTEVRAAIWEACGD 3
V S QPS+TEVR A+WEACGD
Sbjct: 436 VESRPGEQPSETEVRMAVWEACGD 459
Score = 101 bits (251), Expect(2) = e-128
Identities = 46/58 (79%), Positives = 50/58 (86%)
Frame = -1
Query: 1152 MFQQGDVDDRFLIILFLTVERLRKNSAWKPYLDMLPTAFGNPLWFTDEEFLELKGTTL 979
MFQ G VDDRFLIILFLT ERLR NS+WKPYLDMLPT FGNPLWF+D++ LEL GT L
Sbjct: 80 MFQDGQVDDRFLIILFLTFERLRINSSWKPYLDMLPTRFGNPLWFSDDDILELNGTNL 137
>ref|NP_001030933.1| SET domain-containing protein [Arabidopsis thaliana]
gi|63003834|gb|AAY25446.1| At1g01920 [Arabidopsis
thaliana] gi|332189233|gb|AEE27354.1| SET
domain-containing protein [Arabidopsis thaliana]
Length = 547
Score = 382 bits (982), Expect(2) = e-128
Identities = 188/324 (58%), Positives = 243/324 (75%), Gaps = 2/324 (0%)
Frame = -2
Query: 968 LQKKNLQTVYEDKVKNLVLELL--DGELESEVQFKDFLWANSIFWTRALNIPFPHSYVFP 795
LQKK L ++Y DKV+ LV +LL DG+ ES+V F+ FLWANS+FW+RALNIP PHS+VFP
Sbjct: 143 LQKKKLLSLYHDKVEVLVTKLLILDGDSESKVSFEHFLWANSVFWSRALNIPLPHSFVFP 202
Query: 794 QAVEEKEGCPSFGKDSDASRMCGEVSSSLKDEKVGNRTDVASNSMHGESIWVEGLVPGID 615
Q+ ++ C S + + + + +S +++++ + A + G++IWVEGLVPGID
Sbjct: 203 QSQDDTGECTSTSESPETAPV-----NSNEEKEI--QAQPAPSVGSGDTIWVEGLVPGID 255
Query: 614 FCNHGLKAATTWEVDGSGSTTGVPASMYLLSAEKSPFQIDKEVYISYGNKGNEELLYLYG 435
FCNH LK TWEVDG GS + VP SMYLLS + P KE+ ISYGNKGNEELLYLYG
Sbjct: 256 FCNHDLKPVATWEVDGIGSVSRVPFSMYLLSVAQRPIP-KKEISISYGNKGNEELLYLYG 314
Query: 434 FVIDNNPDDYLMVHYPIEAFQSLPFADTKGRLLEIQKAEMRCLLPKRLLNHGFFSGVPQQ 255
FVIDNNPDDYLMVHYP+EA S+PF+D+KG+LLE Q A++RCLLPK +LNHGFF
Sbjct: 315 FVIDNNPDDYLMVHYPVEAIPSIPFSDSKGQLLEAQNAQLRCLLPKSVLNHGFFPRTTSV 374
Query: 254 CEDRNTLSDDRICNYSWAGQRKMPSYSSKLVFPEDFVTALRTIAMKEEELHQASSLLEEL 75
+ + R CN+SW+G+RKMP+Y +KLVFPEDF+T LRTIAM+EEE+++ S++LEEL
Sbjct: 375 IRESDEKETVRSCNFSWSGKRKMPTYMNKLVFPEDFMTGLRTIAMQEEEIYKVSAMLEEL 434
Query: 74 VGSDEERQPSDTEVRAAIWEACGD 3
V S + QPS+TEVR A+WEACGD
Sbjct: 435 VESRQGEQPSETEVRMAVWEACGD 458
Score = 103 bits (257), Expect(2) = e-128
Identities = 46/58 (79%), Positives = 53/58 (91%)
Frame = -1
Query: 1152 MFQQGDVDDRFLIILFLTVERLRKNSAWKPYLDMLPTAFGNPLWFTDEEFLELKGTTL 979
MF+QG VDDRFL+ILFLT+ERLR NS+WKPYLDMLPT FGNPLWF+D++ LELKGT L
Sbjct: 80 MFEQGQVDDRFLMILFLTLERLRINSSWKPYLDMLPTRFGNPLWFSDDDILELKGTNL 137