BLASTX nr result

ID: Coptis24_contig00013920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013920
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324140.1| predicted protein [Populus trichocarpa] gi|2...   170   1e-40
emb|CBI27785.3| unnamed protein product [Vitis vinifera]              169   2e-40
ref|XP_002277706.1| PREDICTED: transmembrane protein 184C-like [...   169   2e-40
ref|XP_003595329.1| Transmembrane protein 184C [Medicago truncat...   169   3e-40
ref|XP_003534953.1| PREDICTED: transmembrane protein 184C-like [...   167   8e-40

>ref|XP_002324140.1| predicted protein [Populus trichocarpa] gi|222865574|gb|EEF02705.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score =  170 bits (430), Expect = 1e-40
 Identities = 74/86 (86%), Positives = 84/86 (97%)
 Frame = -3

Query: 259 QYMILKTFCAFLAFVLELFGVYGDGEFKWHYGYPYLAVVLNFCQMWALFCLVQFYHVTHR 80
           QYMILKTFCAFLAF+LELFGV+GDGEFKW+YGYPY+AVVLNF QMWAL+CLVQFY+VTH 
Sbjct: 162 QYMILKTFCAFLAFLLELFGVFGDGEFKWYYGYPYIAVVLNFSQMWALYCLVQFYNVTHE 221

Query: 79  RLQPIKPLSKFISFKAIVFATWWQGV 2
           RL+PIKPL+KF+SFKAIVFATWWQG+
Sbjct: 222 RLKPIKPLAKFVSFKAIVFATWWQGL 247


>emb|CBI27785.3| unnamed protein product [Vitis vinifera]
          Length = 439

 Score =  169 bits (429), Expect = 2e-40
 Identities = 78/86 (90%), Positives = 81/86 (94%)
 Frame = -3

Query: 259 QYMILKTFCAFLAFVLELFGVYGDGEFKWHYGYPYLAVVLNFCQMWALFCLVQFYHVTHR 80
           QYMILKT CAFLAFVLELFGVYGDGEFKW YGYPY+AVVLNF QMWALFCLVQFY+VTH 
Sbjct: 195 QYMILKTVCAFLAFVLELFGVYGDGEFKWRYGYPYMAVVLNFSQMWALFCLVQFYNVTHG 254

Query: 79  RLQPIKPLSKFISFKAIVFATWWQGV 2
           RLQ IKPL+KFISFKAIVFATWWQGV
Sbjct: 255 RLQSIKPLAKFISFKAIVFATWWQGV 280


>ref|XP_002277706.1| PREDICTED: transmembrane protein 184C-like [Vitis vinifera]
          Length = 432

 Score =  169 bits (429), Expect = 2e-40
 Identities = 78/86 (90%), Positives = 81/86 (94%)
 Frame = -3

Query: 259 QYMILKTFCAFLAFVLELFGVYGDGEFKWHYGYPYLAVVLNFCQMWALFCLVQFYHVTHR 80
           QYMILKT CAFLAFVLELFGVYGDGEFKW YGYPY+AVVLNF QMWALFCLVQFY+VTH 
Sbjct: 170 QYMILKTVCAFLAFVLELFGVYGDGEFKWRYGYPYMAVVLNFSQMWALFCLVQFYNVTHG 229

Query: 79  RLQPIKPLSKFISFKAIVFATWWQGV 2
           RLQ IKPL+KFISFKAIVFATWWQGV
Sbjct: 230 RLQSIKPLAKFISFKAIVFATWWQGV 255


>ref|XP_003595329.1| Transmembrane protein 184C [Medicago truncatula]
           gi|355484377|gb|AES65580.1| Transmembrane protein 184C
           [Medicago truncatula]
          Length = 439

 Score =  169 bits (427), Expect = 3e-40
 Identities = 75/86 (87%), Positives = 82/86 (95%)
 Frame = -3

Query: 259 QYMILKTFCAFLAFVLELFGVYGDGEFKWHYGYPYLAVVLNFCQMWALFCLVQFYHVTHR 80
           QYMILKT CAFLA +LELFGVYGDGEFKW+YGYPY+AVVLNF Q+WAL+CLVQFY+VTH 
Sbjct: 181 QYMILKTVCAFLAMILELFGVYGDGEFKWYYGYPYMAVVLNFSQIWALYCLVQFYNVTHE 240

Query: 79  RLQPIKPLSKFISFKAIVFATWWQGV 2
           RLQPIKPL+KFISFKAIVFATWWQGV
Sbjct: 241 RLQPIKPLAKFISFKAIVFATWWQGV 266


>ref|XP_003534953.1| PREDICTED: transmembrane protein 184C-like [Glycine max]
          Length = 396

 Score =  167 bits (423), Expect = 8e-40
 Identities = 75/86 (87%), Positives = 81/86 (94%)
 Frame = -3

Query: 259 QYMILKTFCAFLAFVLELFGVYGDGEFKWHYGYPYLAVVLNFCQMWALFCLVQFYHVTHR 80
           QYMILKT CA LAF+LEL GVYGDGEFKW+YGYPY+AVVLNF QMWAL+CLVQFY+VTH 
Sbjct: 166 QYMILKTVCALLAFILELAGVYGDGEFKWYYGYPYIAVVLNFSQMWALYCLVQFYNVTHE 225

Query: 79  RLQPIKPLSKFISFKAIVFATWWQGV 2
           RLQPIKPL+KFISFKAIVFATWWQGV
Sbjct: 226 RLQPIKPLAKFISFKAIVFATWWQGV 251


Top