BLASTX nr result

ID: Coptis24_contig00013897 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013897
         (1086 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36956.3| unnamed protein product [Vitis vinifera]              271   2e-70
ref|XP_002270750.2| PREDICTED: LOW QUALITY PROTEIN: WRKY transcr...   254   3e-65
ref|XP_002515275.1| conserved hypothetical protein [Ricinus comm...   251   2e-64
ref|XP_002320972.1| predicted protein [Populus trichocarpa] gi|2...   234   3e-59
gb|ACV92005.1| WRKY transcription factor 3 [(Populus tomentosa x...   223   5e-56

>emb|CBI36956.3| unnamed protein product [Vitis vinifera]
          Length = 242

 Score =  271 bits (693), Expect = 2e-70
 Identities = 148/247 (59%), Positives = 171/247 (69%), Gaps = 11/247 (4%)
 Frame = +1

Query: 235 MESNYSSLREHKNTENLTSKRRKVADKTVVTVRIEANAGKQKTEGPPTDFWSWRKYGQKP 414
           M+ +    +E K+ E   SK+R+V  KTVVTVRIEAN GKQK EGPP+DFWSWRKYGQKP
Sbjct: 1   MDGSVKVSKELKH-ETQASKKRRVVQKTVVTVRIEANVGKQKNEGPPSDFWSWRKYGQKP 59

Query: 415 IKGSPYPRGYYRCSTSKGCSAKKQVERCRTDASVLIITYTSEHNHPGPDISTCTNFSLEL 594
           IKGSPYPRGYYRCSTSKGCSAKKQVERCRTDAS+LIITYTS HNHPGPD+ST  N   + 
Sbjct: 60  IKGSPYPRGYYRCSTSKGCSAKKQVERCRTDASMLIITYTSSHNHPGPDLSTTPNSLNQP 119

Query: 595 QPPNTESIEVLSSTP--DQQP-------TIEEHNEDHQLHYFQSPTDCSEEIIHNQVVED 747
           + P T+ IE   +TP  D QP       + E+ +EDH  HYFQS       I H    ED
Sbjct: 120 KDPQTQPIEETPTTPKEDHQPQQPITMASDEDASEDH-FHYFQS------TISHE---ED 169

Query: 748 PLTLTLEKTHESFSVLFDEEPLSYPHLMTFSSIPKSXXXXXXXXXXXXPTSSSLTGIMRT 927
           P  + LEKTH+S  V+FDE+PL+YPHLMTFS+ PKS            PTSSS T  MR+
Sbjct: 170 PFKVNLEKTHDSLGVVFDEQPLAYPHLMTFST-PKSEENDFFDELEELPTSSSFTSFMRS 228

Query: 928 --NFFDD 942
             NFFDD
Sbjct: 229 GFNFFDD 235


>ref|XP_002270750.2| PREDICTED: LOW QUALITY PROTEIN: WRKY transcription factor 22 [Vitis
           vinifera]
          Length = 233

 Score =  254 bits (648), Expect = 3e-65
 Identities = 135/216 (62%), Positives = 157/216 (72%), Gaps = 9/216 (4%)
 Frame = +1

Query: 235 MESNYSSLREHKNTENLTSKRRKVADKTVVTVRIEANAGKQKTEGPPTDFWSWRKYGQKP 414
           M+ +    +E K+ E   SK+R+V  KTVVTVRIEAN GKQK EGPP+DFWSWRKYGQKP
Sbjct: 1   MDGSVKVSKELKH-ETQASKKRRVVQKTVVTVRIEANVGKQKNEGPPSDFWSWRKYGQKP 59

Query: 415 IKGSPYPRGYYRCSTSKGCSAKKQVERCRTDASVLIITYTSEHNHPGPDISTCTNFSLEL 594
           IKGSPYPRGYYRCSTSKGCSAKKQVERCRTDAS+LIITYTS HNHPGPD+ST  N   + 
Sbjct: 60  IKGSPYPRGYYRCSTSKGCSAKKQVERCRTDASMLIITYTSSHNHPGPDLSTTPNSLNQP 119

Query: 595 QPPNTESIEVLSSTP--DQQP-------TIEEHNEDHQLHYFQSPTDCSEEIIHNQVVED 747
           + P T+ IE   +TP  D QP       + E+ +EDH  HYFQS       I H    ED
Sbjct: 120 KDPQTQPIEETPTTPKEDHQPQQPITMASDEDASEDH-FHYFQS------TISHE---ED 169

Query: 748 PLTLTLEKTHESFSVLFDEEPLSYPHLMTFSSIPKS 855
           P  + LEKTH+S  V+FDE+PL+YPHLMTFS+ PKS
Sbjct: 170 PFKVNLEKTHDSLGVVFDEQPLAYPHLMTFST-PKS 204


>ref|XP_002515275.1| conserved hypothetical protein [Ricinus communis]
           gi|223545755|gb|EEF47259.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 265

 Score =  251 bits (642), Expect = 2e-64
 Identities = 138/260 (53%), Positives = 172/260 (66%), Gaps = 23/260 (8%)
 Frame = +1

Query: 232 RMESNYSSLREHKNTENLTSKRRKVADKTVVTVRIEANAGKQKTEGPPTDFWSWRKYGQK 411
           ++ES  S L+    +E   SKRRKV +KTVVTV+IEANA K K +GPP+DFWSWRKYGQK
Sbjct: 8   KLESEVSDLK----SETRASKRRKVVEKTVVTVKIEANARKLKNDGPPSDFWSWRKYGQK 63

Query: 412 PIKGSPYPRGYYRCSTSKGCSAKKQVERCRTDASVLIITYTSEHNHPGPDI-STCTNFSL 588
           PIKGSPYPRGYYRCSTSKGCSAKKQVERCRTDASVLIITYTS HNHPGPD+ ST  N  L
Sbjct: 64  PIKGSPYPRGYYRCSTSKGCSAKKQVERCRTDASVLIITYTSNHNHPGPDLHSTGLNKQL 123

Query: 589 ELQ--PPNTESIEVLSSTP--DQQPTIEEHNE-------------DHQLHYFQSPTDCSE 717
                 P+T+  +   +TP  +++  IE+H++             DH  HY QSP +CS+
Sbjct: 124 NASQTQPSTDDQDHPITTPKQEEEDEIEKHDQQPVESISHKDESADHNFHYLQSPVNCSQ 183

Query: 718 EII-----HNQVVEDPLTLTLEKTHESFSVLFDEEPLSYPHLMTFSSIPKSXXXXXXXXX 882
           +I+     H  +VE+    + E+TH +  ++ DEEP+S P LMTFS+ P S         
Sbjct: 184 DIMITQEDHPFIVEN----SSEETHNTLGIVLDEEPISRPRLMTFST-PASEENDFFDEL 238

Query: 883 XXXPTSSSLTGIMRTNFFDD 942
              PT SS T  MR+NFFD+
Sbjct: 239 EELPTYSSFTSFMRSNFFDE 258


>ref|XP_002320972.1| predicted protein [Populus trichocarpa] gi|222861745|gb|EEE99287.1|
           predicted protein [Populus trichocarpa]
          Length = 262

 Score =  234 bits (597), Expect = 3e-59
 Identities = 126/255 (49%), Positives = 159/255 (62%), Gaps = 18/255 (7%)
 Frame = +1

Query: 232 RMESNYSSLREHKNTENLTSKRRKVADKTVVTVRIEANAGKQKTEGPPTDFWSWRKYGQK 411
           +++SN S L      E  TSKRRK+ +K VV VRI  NA K K EGPP+DFWSWRKYGQK
Sbjct: 8   KLDSNVSEL----TPETQTSKRRKMVEKIVVRVRIGENAVKLKNEGPPSDFWSWRKYGQK 63

Query: 412 PIKGSPYPRGYYRCSTSKGCSAKKQVERCRTDASVLIITYTSEHNHPGPDISTCTNFSLE 591
           PIKGSPYPRGYYRCSTSKGCSAKKQVERCRTDASVLI+TYTS HNHPGPD+   +N + +
Sbjct: 64  PIKGSPYPRGYYRCSTSKGCSAKKQVERCRTDASVLIVTYTSNHNHPGPDLHD-SNVNQQ 122

Query: 592 LQPPNTESIEVLSS--TPDQQ----------------PTIEEHNEDHQLHYFQSPTDCSE 717
            + P T   +++    TP Q+                 T E+ +E H  HY +SP    +
Sbjct: 123 PRDPETPPTDLVDHPITPKQEKPEEETGERHDHPIMPSTDEDVSEGHNFHYLESPIRIPQ 182

Query: 718 EIIHNQVVEDPLTLTLEKTHESFSVLFDEEPLSYPHLMTFSSIPKSXXXXXXXXXXXXPT 897
           +I+ +Q  + P T   EK+H++  ++FDEEP+    LMTFS+                PT
Sbjct: 183 DIMISQ--DYPFTENSEKSHDTLGIVFDEEPICCSRLMTFSAPKSEENNDFFDELEELPT 240

Query: 898 SSSLTGIMRTNFFDD 942
           SSS T  +R NFFD+
Sbjct: 241 SSSFTSFVRGNFFDE 255


>gb|ACV92005.1| WRKY transcription factor 3 [(Populus tomentosa x P. bolleana) x P.
           tomentosa]
          Length = 245

 Score =  223 bits (569), Expect = 5e-56
 Identities = 122/220 (55%), Positives = 148/220 (67%), Gaps = 18/220 (8%)
 Frame = +1

Query: 250 SSLREHKNTENLTSKRRKVADKTVVTVRIEANAGKQKTEGPPTDFWSWRKYGQKPIKGSP 429
           S++ EH   E   SKRRKV +KTVV VRI  NAGK K EGPP+DFWSWRKYGQKPIKGSP
Sbjct: 11  SNVSEHTQ-EIQASKRRKVVEKTVVRVRIGKNAGKLKNEGPPSDFWSWRKYGQKPIKGSP 69

Query: 430 YPRGYYRCSTSKGCSAKKQVERCRTDASVLIITYTSEHNHPGPDI--STCTNFSLELQPP 603
           +PRGYYRCSTSKGCSAKKQVERCRTDASVLIITYTS HNHPGPD+  S+    S + + P
Sbjct: 70  HPRGYYRCSTSKGCSAKKQVERCRTDASVLIITYTSNHNHPGPDLHESSLNQQSKDPETP 129

Query: 604 NTESIEVLSSTPDQQPTIEEHNEDH----------------QLHYFQSPTDCSEEIIHNQ 735
            T+ ++   +TP Q+   EE  E+H                  HY QSP   S++I+ +Q
Sbjct: 130 PTDHVD-HPTTPRQEKPEEETEEEHGHPIVPSAGENASEGNSFHYLQSPIRISQDIMISQ 188

Query: 736 VVEDPLTLTLEKTHESFSVLFDEEPLSYPHLMTFSSIPKS 855
             ED      EK+H++  ++ DEEP+S   LMTFS+ PKS
Sbjct: 189 --EDTFAENAEKSHDTLGIVLDEEPVSCSRLMTFSA-PKS 225


Top