BLASTX nr result

ID: Coptis24_contig00013881 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013881
         (751 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301781.1| predicted protein [Populus trichocarpa] gi|2...   157   2e-36
gb|ABK94910.1| unknown [Populus trichocarpa]                          157   2e-36
ref|XP_002266086.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-...   156   4e-36
ref|XP_002303829.1| predicted protein [Populus trichocarpa] gi|2...   155   9e-36
gb|AFK45695.1| unknown [Medicago truncatula]                          149   5e-34

>ref|XP_002301781.1| predicted protein [Populus trichocarpa] gi|222843507|gb|EEE81054.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score =  157 bits (398), Expect = 2e-36
 Identities = 71/121 (58%), Positives = 88/121 (72%), Gaps = 5/121 (4%)
 Frame = -3

Query: 362 DEVENVEEAFLCSVCLDLLYKPIVLACGHISCFWCVHLEMSGMGESHCPICTCPYSHFPS 183
           D  E   ++F CSVCLDLLYKPIVL+CGHISCFWCVH  MSG+ ES+CPIC  PY+HFP+
Sbjct: 15  DLEEEFSDSFRCSVCLDLLYKPIVLSCGHISCFWCVHKSMSGLRESNCPICRHPYNHFPT 74

Query: 182 ICQLLHFLLLKMYPVAYKRRAKQVLEKEKNQGFFSPQLG-----DNVLSAHSCEKSNCLD 18
           ICQ+LHFLL K+YP+ Y RR +Q LE+E   GFFSPQ G      ++   H  ++ + LD
Sbjct: 75  ICQMLHFLLFKLYPMVYTRREEQTLEEEMEMGFFSPQFGYKECNSDLKHHHPRDRKHALD 134

Query: 17  S 15
           S
Sbjct: 135 S 135


>gb|ABK94910.1| unknown [Populus trichocarpa]
          Length = 469

 Score =  157 bits (398), Expect = 2e-36
 Identities = 71/121 (58%), Positives = 88/121 (72%), Gaps = 5/121 (4%)
 Frame = -3

Query: 362 DEVENVEEAFLCSVCLDLLYKPIVLACGHISCFWCVHLEMSGMGESHCPICTCPYSHFPS 183
           D  E   ++F CSVCLDLLYKPIVL+CGHISCFWCVH  MSG+ ES+CPIC  PY+HFP+
Sbjct: 28  DLEEEFSDSFRCSVCLDLLYKPIVLSCGHISCFWCVHKSMSGLRESNCPICRHPYNHFPT 87

Query: 182 ICQLLHFLLLKMYPVAYKRRAKQVLEKEKNQGFFSPQLG-----DNVLSAHSCEKSNCLD 18
           ICQ+LHFLL K+YP+ Y RR +Q LE+E   GFFSPQ G      ++   H  ++ + LD
Sbjct: 88  ICQMLHFLLFKLYPMVYTRREEQTLEEEMEMGFFSPQFGYKECNSDLKHHHPRDRKHALD 147

Query: 17  S 15
           S
Sbjct: 148 S 148


>ref|XP_002266086.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-like [Vitis vinifera]
          Length = 470

 Score =  156 bits (395), Expect = 4e-36
 Identities = 69/107 (64%), Positives = 81/107 (75%)
 Frame = -3

Query: 353 ENVEEAFLCSVCLDLLYKPIVLACGHISCFWCVHLEMSGMGESHCPICTCPYSHFPSICQ 174
           + +  +F C VCLDLLYKPIVLACGHISCFWCVH  M G  ESHCPIC  PYSHFP+ICQ
Sbjct: 16  DEISRSFTCCVCLDLLYKPIVLACGHISCFWCVHYSMDGAHESHCPICRNPYSHFPTICQ 75

Query: 173 LLHFLLLKMYPVAYKRRAKQVLEKEKNQGFFSPQLGDNVLSAHSCEK 33
           +LHF+LLKMYPVAYKRR KQ LE+E+    FSP+       +H+ +K
Sbjct: 76  MLHFMLLKMYPVAYKRREKQTLEREEETRCFSPRFDAYGGGSHTYKK 122


>ref|XP_002303829.1| predicted protein [Populus trichocarpa] gi|222841261|gb|EEE78808.1|
           predicted protein [Populus trichocarpa]
          Length = 469

 Score =  155 bits (392), Expect = 9e-36
 Identities = 76/135 (56%), Positives = 93/135 (68%), Gaps = 6/135 (4%)
 Frame = -3

Query: 398 NSKTDNLSSLVIDEVENVEEA------FLCSVCLDLLYKPIVLACGHISCFWCVHLEMSG 237
           N KT +   L   E +NV E       F CSVCLDLLYKP+VL CGH+SCFWCV   M+G
Sbjct: 24  NKKTPSPKHLQQIEEDNVREEEDFLDEFQCSVCLDLLYKPVVLGCGHLSCFWCVFYSMNG 83

Query: 236 MGESHCPICTCPYSHFPSICQLLHFLLLKMYPVAYKRRAKQVLEKEKNQGFFSPQLGDNV 57
           + ESHCPIC   ++HFPS+CQLLHFLL+KMYP+AYKRR ++V E+EK  G FSPQ   + 
Sbjct: 84  LRESHCPICRHQFNHFPSVCQLLHFLLMKMYPIAYKRREREVGEEEKKGGRFSPQFVHHP 143

Query: 56  LSAHSCEKSNCLDSP 12
             +HS E+   LD P
Sbjct: 144 FGSHSGEE---LDFP 155


>gb|AFK45695.1| unknown [Medicago truncatula]
          Length = 410

 Score =  149 bits (377), Expect = 5e-34
 Identities = 65/114 (57%), Positives = 81/114 (71%), Gaps = 5/114 (4%)
 Frame = -3

Query: 353 ENVEEAFLCSVCLDLLYKPIVLACGHISCFWCVHLEMSGMGESHCPICTCPYSHFPSICQ 174
           E + ++F C VCLDLLYKPIVL+CGH+ CFWC+H  MSG+ ES CP C   Y HFP++CQ
Sbjct: 16  EEIPDSFCCCVCLDLLYKPIVLSCGHMRCFWCIHKSMSGVRESKCPTCRHQYYHFPTVCQ 75

Query: 173 LLHFLLLKMYPVAYKRRAKQVLEKEKNQGFFSPQLGDNVLSA-----HSCEKSN 27
           LLHFLLLK+YPVAY RR  Q LE+EK  G++SPQ   +   +     HSC  S+
Sbjct: 76  LLHFLLLKLYPVAYNRRTNQTLEEEKKSGYYSPQFDFDTCESQAKFGHSCSPSS 129


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