BLASTX nr result

ID: Coptis24_contig00013879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013879
         (581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23742.3| unnamed protein product [Vitis vinifera]               81   1e-13
ref|XP_002282484.1| PREDICTED: uncharacterized protein LOC100249...    81   1e-13
emb|CAN69681.1| hypothetical protein VITISV_003774 [Vitis vinifera]    81   1e-13
ref|XP_002312615.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12
ref|XP_002315595.1| predicted protein [Populus trichocarpa] gi|2...    75   8e-12

>emb|CBI23742.3| unnamed protein product [Vitis vinifera]
          Length = 422

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 45/85 (52%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
 Frame = +3

Query: 3   PPGCEGSLTSFLASAYCXXXXXXXXXXXXXXXXXXXXAGDYSSLPLGILLQFLAALVPLA 182
           P GCEGSLTSFLASA+C                     GDYSSLP+GIL+QFLAALVPL 
Sbjct: 302 PSGCEGSLTSFLASAFCLSSIFSGVFGAGLASLIGITGGDYSSLPVGILIQFLAALVPLG 361

Query: 183 WLSFVPMYKSGVE---KGGRIKRSR 248
           W+  VPM     E   K G  KRSR
Sbjct: 362 WMHLVPMVDPTAEKERKKGTSKRSR 386


>ref|XP_002282484.1| PREDICTED: uncharacterized protein LOC100249433 [Vitis vinifera]
          Length = 551

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 45/85 (52%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
 Frame = +3

Query: 3   PPGCEGSLTSFLASAYCXXXXXXXXXXXXXXXXXXXXAGDYSSLPLGILLQFLAALVPLA 182
           P GCEGSLTSFLASA+C                     GDYSSLP+GIL+QFLAALVPL 
Sbjct: 441 PSGCEGSLTSFLASAFCLSSIFSGVFGAGLASLIGITGGDYSSLPVGILIQFLAALVPLG 500

Query: 183 WLSFVPMYKSGVE---KGGRIKRSR 248
           W+  VPM     E   K G  KRSR
Sbjct: 501 WMHLVPMVDPTAEKERKKGTSKRSR 525


>emb|CAN69681.1| hypothetical protein VITISV_003774 [Vitis vinifera]
          Length = 534

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 45/85 (52%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
 Frame = +3

Query: 3   PPGCEGSLTSFLASAYCXXXXXXXXXXXXXXXXXXXXAGDYSSLPLGILLQFLAALVPLA 182
           P GCEGSLTSFLASA+C                     GDYSSLP+GIL+QFLAALVPL 
Sbjct: 424 PSGCEGSLTSFLASAFCLSSIFSGVFGAGLASLIGIIGGDYSSLPVGILIQFLAALVPLG 483

Query: 183 WLSFVPMYKSGVE---KGGRIKRSR 248
           W+  VPM     E   K G  KRSR
Sbjct: 484 WMHLVPMVDPTAEKERKKGTSKRSR 508


>ref|XP_002312615.1| predicted protein [Populus trichocarpa] gi|222852435|gb|EEE89982.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score = 75.5 bits (184), Expect = 6e-12
 Identities = 42/85 (49%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
 Frame = +3

Query: 3   PPGCEGSLTSFLASAYCXXXXXXXXXXXXXXXXXXXXAGDYSSLPLGILLQFLAALVPLA 182
           P GCEGSLTSFLAS+ C                    +GDYSSLP+GIL+QF AAL+PL 
Sbjct: 302 PQGCEGSLTSFLASSLCLSSIVSGFLGVGLASLIGITSGDYSSLPMGILIQFFAALLPLG 361

Query: 183 WLSFVPMYKSGVE---KGGRIKRSR 248
           W+  VPM +  VE   K G  KR+R
Sbjct: 362 WIHRVPMSEPIVEKERKQGMSKRTR 386


>ref|XP_002315595.1| predicted protein [Populus trichocarpa] gi|222864635|gb|EEF01766.1|
           predicted protein [Populus trichocarpa]
          Length = 470

 Score = 75.1 bits (183), Expect = 8e-12
 Identities = 42/85 (49%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
 Frame = +3

Query: 3   PPGCEGSLTSFLASAYCXXXXXXXXXXXXXXXXXXXXAGDYSSLPLGILLQFLAALVPLA 182
           P GCEGSLTSFLAS+ C                    +G+YSSLP+GIL+QFLAAL+PL 
Sbjct: 363 PQGCEGSLTSFLASSLCLSSIVSGFLGVGLASLIGITSGNYSSLPVGILIQFLAALLPLG 422

Query: 183 WLSFVPMYKSGVEK---GGRIKRSR 248
           W+  +PM K  VEK    G  KR+R
Sbjct: 423 WIHRLPMSKPIVEKERRRGMSKRTR 447


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