BLASTX nr result
ID: Coptis24_contig00013876
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00013876
(1381 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004147167.1| PREDICTED: glutamyl-tRNA(Gln) amidotransfera... 700 0.0
ref|XP_002282340.1| PREDICTED: glutamyl-tRNA(Gln) amidotransfera... 700 0.0
ref|XP_002528338.1| Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransfe... 697 0.0
ref|XP_004169939.1| PREDICTED: LOW QUALITY PROTEIN: glutamyl-tRN... 692 0.0
ref|XP_003525222.1| PREDICTED: aspartyl/glutamyl-tRNA(Asn/Gln) a... 686 0.0
>ref|XP_004147167.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit B,
chloroplastic/mitochondrial-like [Cucumis sativus]
Length = 555
Score = 700 bits (1807), Expect = 0.0
Identities = 342/427 (80%), Positives = 386/427 (90%), Gaps = 8/427 (1%)
Frame = +1
Query: 124 QTQQPKPSNPNHKKPTNSKLLTNYESIIGIETHVQLSTQTKAFCSCPYTYGSQPNSNICP 303
+ Q+P +P+ K K+ +YE++IGIETHVQLST TKAFCSCPY YGS PN+NICP
Sbjct: 44 EKQRPMAISPHFDKQIIDKISKDYEAVIGIETHVQLSTLTKAFCSCPYNYGSSPNTNICP 103
Query: 304 ICMGLPGALPVFNSKVIEFAVKLGLALNCKLSLNSKFDRKQYFYPDLPKGYQISQFDVPI 483
ICMGLPGALPV NSKVIE AVKLGLALNC LS NSKFDRKQYFYPDLPKGYQISQFDVPI
Sbjct: 104 ICMGLPGALPVLNSKVIESAVKLGLALNCSLSFNSKFDRKQYFYPDLPKGYQISQFDVPI 163
Query: 484 ASNGFVDLDLPVEFGGGHRRFGITRVHIEEDAGKLLHSDTGTYSQ--------VDLNRAG 639
AS G++DLDLP+E+GGGHRRFGITRVH+EEDAGKLLHS++G+YSQ VDLNRAG
Sbjct: 164 ASGGYIDLDLPIEYGGGHRRFGITRVHMEEDAGKLLHSESGSYSQEMTFYFFQVDLNRAG 223
Query: 640 VPLLEIVSEPDMRTGLEAAEYASEIQRVVRFLDVSNGNMQEGSLRCDVNVSVRPIGQAEF 819
VPLLEIVSEPDMRTG+EAAEYA+E+QR+VR+L VSNGNMQEGSLRCDVNVSVRPIGQ++F
Sbjct: 224 VPLLEIVSEPDMRTGIEAAEYAAELQRLVRYLGVSNGNMQEGSLRCDVNVSVRPIGQSQF 283
Query: 820 GTKVEIKNMNSFSAMHRAIDFEISRQVLLHSQGQEDQIVQETRLWEEGAQKTVTMRKKEG 999
GTKVEIKN+NSFS++ RAIDFEISRQVLLHSQGQ DQIVQETRLWEEGAQKT+TMRKKEG
Sbjct: 284 GTKVEIKNLNSFSSVSRAIDFEISRQVLLHSQGQSDQIVQETRLWEEGAQKTITMRKKEG 343
Query: 1000 LADYRYFPEPDLPEVVLTTEYIDGIKASLLELPELKRRRYESMGLSMQDVLFLANDISVC 1179
L+DYRYFPEPDLPEV+LT EY++ I SL ELPE+KRRRYESMGLSMQDVLFLANDISV
Sbjct: 344 LSDYRYFPEPDLPEVILTKEYVENIHDSLPELPEMKRRRYESMGLSMQDVLFLANDISVA 403
Query: 1180 RFFDAAVAKGADVKMAANWIMGDIAAYLNNEKLSIDEIKLTPEELSELIASIRGGVISGK 1359
FFDA +A+GA+VK+AANWIMGDIAAY+ NEKL+I++IKLTP+EL+ELIASI+GG ISGK
Sbjct: 404 EFFDATIARGAEVKLAANWIMGDIAAYMKNEKLTINDIKLTPQELAELIASIKGGTISGK 463
Query: 1360 IGKEILF 1380
IGKEILF
Sbjct: 464 IGKEILF 470
>ref|XP_002282340.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit B,
chloroplastic/mitochondrial-like [Vitis vinifera]
Length = 556
Score = 700 bits (1806), Expect = 0.0
Identities = 356/471 (75%), Positives = 391/471 (83%), Gaps = 17/471 (3%)
Frame = +1
Query: 19 MASICFKAIQTRPFFXXXXXXXXXXXXXXXXXXXX-QTQQPKPSN--------PNHKKPT 171
MASI F+ +Q RPF QT P N P K
Sbjct: 1 MASILFRGVQARPFLLYPSALFGRKSGVLYCTIKGTQTHTAAPENKQPQLKVSPQTKAKV 60
Query: 172 NSKLLTNYESIIGIETHVQLSTQTKAFCSCPYTYGSQPNSNICPICMGLPGALPVFNSKV 351
K+ +YE+IIGIETHVQLST TKAFCSCPY YGSQPN+ ICPICMGLPG LPV NSKV
Sbjct: 61 LDKISQDYEAIIGIETHVQLSTLTKAFCSCPYNYGSQPNTCICPICMGLPGTLPVLNSKV 120
Query: 352 IEFAVKLGLALNCKLSLNSKFDRKQYFYPDLPKGYQISQFDVPIASNGFVDLDLPVEFGG 531
IEFAVK+GLALN KLSLNSKFDRKQYFYPDLPKGYQISQFD+PIAS G+VDLDLPVEFGG
Sbjct: 121 IEFAVKVGLALNSKLSLNSKFDRKQYFYPDLPKGYQISQFDIPIASGGYVDLDLPVEFGG 180
Query: 532 GHRRFGITRVHIEEDAGKLLHSDTGTYSQ--------VDLNRAGVPLLEIVSEPDMRTGL 687
GHRRFGITRVH+EEDAGKLLHS G+YSQ VDLNRAGVPLLEIVSEPDMR+G+
Sbjct: 181 GHRRFGITRVHMEEDAGKLLHSGNGSYSQEITFSLYSVDLNRAGVPLLEIVSEPDMRSGI 240
Query: 688 EAAEYASEIQRVVRFLDVSNGNMQEGSLRCDVNVSVRPIGQAEFGTKVEIKNMNSFSAMH 867
EA+EYA+E+QR+VR+L VSNGNMQEGSLRCDVNVSVRPIGQ EFGTKVEIKN+NSFSAM+
Sbjct: 241 EASEYAAELQRLVRYLGVSNGNMQEGSLRCDVNVSVRPIGQLEFGTKVEIKNLNSFSAMN 300
Query: 868 RAIDFEISRQVLLHSQGQEDQIVQETRLWEEGAQKTVTMRKKEGLADYRYFPEPDLPEVV 1047
RAIDFEISRQV LHSQGQ DQIVQETRLWEEG QKTVTMRKKEGL+DYRYFPEPDLPEV+
Sbjct: 301 RAIDFEISRQVSLHSQGQSDQIVQETRLWEEGGQKTVTMRKKEGLSDYRYFPEPDLPEVI 360
Query: 1048 LTTEYIDGIKASLLELPELKRRRYESMGLSMQDVLFLANDISVCRFFDAAVAKGADVKMA 1227
LT +Y+ I++SL ELPELKRRRYE MGLSMQDVLFLAND++V FFDA + KGADVK+A
Sbjct: 361 LTEDYVGSIRSSLPELPELKRRRYEKMGLSMQDVLFLANDVNVAGFFDATIGKGADVKLA 420
Query: 1228 ANWIMGDIAAYLNNEKLSIDEIKLTPEELSELIASIRGGVISGKIGKEILF 1380
ANWIMGDIAAY+ NEKLSI+EIKLTP+EL+ELIASI+GG ISGKIGKEILF
Sbjct: 421 ANWIMGDIAAYMKNEKLSINEIKLTPQELAELIASIKGGTISGKIGKEILF 471
>ref|XP_002528338.1| Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, putative
[Ricinus communis] gi|353558725|sp|B9SQR9.1|GATB_RICCO
RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit
B, chloroplastic/mitochondrial; Short=Glu-AdT subunit B;
Flags: Precursor gi|223532206|gb|EEF34010.1|
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit
B, putative [Ricinus communis]
Length = 549
Score = 697 bits (1799), Expect = 0.0
Identities = 354/464 (76%), Positives = 393/464 (84%), Gaps = 10/464 (2%)
Frame = +1
Query: 19 MASICFKAIQTRPF------FXXXXXXXXXXXXXXXXXXXXQTQQPKPS---NPNHKKPT 171
MAS F+ IQT P F Q +Q P +P + +
Sbjct: 1 MASTLFRNIQTHPLLLYPTSFFRRKSSVFYCTVNSTSPTATQEKQQCPRIKVSPQTQSKS 60
Query: 172 NSKLLTNYESIIGIETHVQLSTQTKAFCSCPYTYGSQPNSNICPICMGLPGALPVFNSKV 351
KL +YE+IIGIETHVQLST TKAFCSCPY YG+QPNS ICP+CMGLPGALPV NSKV
Sbjct: 61 LDKLTKDYETIIGIETHVQLSTLTKAFCSCPYNYGAQPNSTICPVCMGLPGALPVLNSKV 120
Query: 352 IEFAVKLGLALNCKLSLNSKFDRKQYFYPDLPKGYQISQFDVPIASNGFVDLDLPVEFGG 531
IEFAVKLGLALNCKLSLNSKFDRKQYFYPDLPKGYQISQFD+PIA++G+VDLDLPVEFGG
Sbjct: 121 IEFAVKLGLALNCKLSLNSKFDRKQYFYPDLPKGYQISQFDIPIATSGYVDLDLPVEFGG 180
Query: 532 GHRRFGITRVHIEEDAGKLLHSDTGTYSQ-VDLNRAGVPLLEIVSEPDMRTGLEAAEYAS 708
GHRRFGITRVH+EEDAGKLLHS G VDLNRAGVPLLEIVSEPDMR G+EAAEYA+
Sbjct: 181 GHRRFGITRVHMEEDAGKLLHSGGGISGAIVDLNRAGVPLLEIVSEPDMRNGIEAAEYAA 240
Query: 709 EIQRVVRFLDVSNGNMQEGSLRCDVNVSVRPIGQAEFGTKVEIKNMNSFSAMHRAIDFEI 888
E+QRVVR+L VSNGNMQEGSLRCDVNVS+RPIGQ+EFGTKVEIKN+NSFS+++RAIDFEI
Sbjct: 241 ELQRVVRYLGVSNGNMQEGSLRCDVNVSIRPIGQSEFGTKVEIKNLNSFSSINRAIDFEI 300
Query: 889 SRQVLLHSQGQEDQIVQETRLWEEGAQKTVTMRKKEGLADYRYFPEPDLPEVVLTTEYID 1068
SRQVLLHSQGQ D IVQETRLWEEGAQKTVTMRKKEGL+DYRYFPEPDLPEVVLT EY+D
Sbjct: 301 SRQVLLHSQGQSDSIVQETRLWEEGAQKTVTMRKKEGLSDYRYFPEPDLPEVVLTEEYVD 360
Query: 1069 GIKASLLELPELKRRRYESMGLSMQDVLFLANDISVCRFFDAAVAKGADVKMAANWIMGD 1248
I++SL ELPE KRRRYE+MGLSMQDVLFLAND SV FFDA +A+GA VK+AANWIMGD
Sbjct: 361 SIQSSLPELPETKRRRYENMGLSMQDVLFLANDTSVAEFFDATIAQGAQVKLAANWIMGD 420
Query: 1249 IAAYLNNEKLSIDEIKLTPEELSELIASIRGGVISGKIGKEILF 1380
IAAY+ NEK+SI+EIKLTP+EL+ELIASI+GG+ISGKIGKEILF
Sbjct: 421 IAAYMKNEKVSINEIKLTPKELAELIASIKGGIISGKIGKEILF 464
>ref|XP_004169939.1| PREDICTED: LOW QUALITY PROTEIN: glutamyl-tRNA(Gln) amidotransferase
subunit B, chloroplastic/mitochondrial-like [Cucumis
sativus]
Length = 556
Score = 692 bits (1786), Expect = 0.0
Identities = 341/428 (79%), Positives = 385/428 (89%), Gaps = 9/428 (2%)
Frame = +1
Query: 124 QTQQPKPSNPNHKKPTNSKLLTNYESIIGIETHVQLSTQTKAFCSCPYTYGSQPNSNICP 303
+ Q+P +P+ K K+ +YE++IGIETHVQLST TKAFCSCPY YGS PN+NICP
Sbjct: 44 EKQRPMAISPHFDKQIIDKISKDYEAVIGIETHVQLSTLTKAFCSCPYNYGSSPNTNICP 103
Query: 304 ICMGLPGALPVFNSKVIEFAVKLGLALNCKLSLNSKFDRKQYFYPDLPKGYQISQFDVPI 483
ICMGLPGALPV NSKVIE AVKLGLALNC LS NSKFDRKQYFYPDLPKGYQISQFDVPI
Sbjct: 104 ICMGLPGALPVLNSKVIESAVKLGLALNCSLSFNSKFDRKQYFYPDLPKGYQISQFDVPI 163
Query: 484 ASNGFVDLDLPVEFGGGHRRFGITRVHIEEDAGKLLHSDTGTYSQ--------VDLNRAG 639
AS G++DLDLP+E+GGGHRRFGITRVH+EEDAGKLLHS++G+YSQ VDLNRAG
Sbjct: 164 ASGGYIDLDLPIEYGGGHRRFGITRVHMEEDAGKLLHSESGSYSQEMTFYFFQVDLNRAG 223
Query: 640 VPLLEIVSEPDMRTGLEAAEYASEIQRVVRFLDVSNGNMQEGSLRCDVNVSVRPIGQAEF 819
VPLLEIVSEPDMRTG+EAAEYA+E+QR+VR+L VSNGNMQEGSLRCDVNVSVRPIGQ++F
Sbjct: 224 VPLLEIVSEPDMRTGIEAAEYAAELQRLVRYLGVSNGNMQEGSLRCDVNVSVRPIGQSQF 283
Query: 820 GTKVEIKNMNSFSAMHRAIDFEISRQVLLHSQGQEDQIVQETRLWEEGAQKTVTMRKKEG 999
GTKVEIKN+NSFS++ RAIDFEISRQVLLHSQGQ DQIVQETRLWEEGAQKT+TMRKKEG
Sbjct: 284 GTKVEIKNLNSFSSVSRAIDFEISRQVLLHSQGQSDQIVQETRLWEEGAQKTITMRKKEG 343
Query: 1000 LADYRYFPEPDLPEVVLTTEYIDGIKASLLELPELKRRRYESMGLSMQDVLFLANDISVC 1179
L+DYRYFPEPDLPEV+LT EY++ I SL ELPE+KRRRYESMGLSMQDVLFLANDISV
Sbjct: 344 LSDYRYFPEPDLPEVILTKEYVENIHDSLPELPEMKRRRYESMGLSMQDVLFLANDISVS 403
Query: 1180 -RFFDAAVAKGADVKMAANWIMGDIAAYLNNEKLSIDEIKLTPEELSELIASIRGGVISG 1356
FDA +A+GA+VK+AANWIMGDIAAY+ NEKL+I++IKLTP+EL+ELIASI+GG ISG
Sbjct: 404 GXVFDATIARGAEVKLAANWIMGDIAAYMKNEKLTINDIKLTPQELAELIASIKGGTISG 463
Query: 1357 KIGKEILF 1380
KIGKEILF
Sbjct: 464 KIGKEILF 471
>ref|XP_003525222.1| PREDICTED: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit
B-like [Glycine max]
Length = 544
Score = 686 bits (1769), Expect = 0.0
Identities = 338/459 (73%), Positives = 388/459 (84%), Gaps = 5/459 (1%)
Frame = +1
Query: 19 MASICFKAIQTRPFFXXXXXXXXXXXXXXXXXXXX-----QTQQPKPSNPNHKKPTNSKL 183
MAS F+++Q PF TQQ K + + + K+
Sbjct: 1 MASTIFRSLQVHPFLLYPTTFLRRRNEVFHLASKATQSQTDTQQTKVTTSSTQSKKLDKI 60
Query: 184 LTNYESIIGIETHVQLSTQTKAFCSCPYTYGSQPNSNICPICMGLPGALPVFNSKVIEFA 363
+YE+IIGIETHVQLST TKAFC CPY+YGS PNS+ICPICMGLPGALPV NSK+I+FA
Sbjct: 61 PKDYEAIIGIETHVQLSTLTKAFCGCPYSYGSPPNSSICPICMGLPGALPVLNSKIIDFA 120
Query: 364 VKLGLALNCKLSLNSKFDRKQYFYPDLPKGYQISQFDVPIASNGFVDLDLPVEFGGGHRR 543
VKLGLALNC L+ NSKFDRKQYFYPDLPKGYQISQFDVPIA+ GF+D+D+PVEFGGGH+R
Sbjct: 121 VKLGLALNCNLAFNSKFDRKQYFYPDLPKGYQISQFDVPIATAGFLDVDIPVEFGGGHKR 180
Query: 544 FGITRVHIEEDAGKLLHSDTGTYSQVDLNRAGVPLLEIVSEPDMRTGLEAAEYASEIQRV 723
FGITRVH+EEDAGKLLH++ G YSQVDLNRAGVPLLEIVSEPDMR G+EAAEYA+E+QR+
Sbjct: 181 FGITRVHMEEDAGKLLHAENGNYSQVDLNRAGVPLLEIVSEPDMRNGIEAAEYAAELQRL 240
Query: 724 VRFLDVSNGNMQEGSLRCDVNVSVRPIGQAEFGTKVEIKNMNSFSAMHRAIDFEISRQVL 903
VR+L VSNGNMQEGSLRCDVNVS+RPIGQ++FGTKVEIKN+NSFS++ RAIDFEISRQV
Sbjct: 241 VRYLGVSNGNMQEGSLRCDVNVSIRPIGQSKFGTKVEIKNLNSFSSVSRAIDFEISRQVQ 300
Query: 904 LHSQGQEDQIVQETRLWEEGAQKTVTMRKKEGLADYRYFPEPDLPEVVLTTEYIDGIKAS 1083
LHSQG+EDQIVQETRLWEEG+Q+T+TMRKKEGLADYRYFPEPDLP V+L+ EY+DGIK S
Sbjct: 301 LHSQGREDQIVQETRLWEEGSQRTITMRKKEGLADYRYFPEPDLPAVILSQEYVDGIKNS 360
Query: 1084 LLELPELKRRRYESMGLSMQDVLFLANDISVCRFFDAAVAKGADVKMAANWIMGDIAAYL 1263
L ELPE+KRRRYE MGLSMQDVLFLAND ++ FFDA +AKGAD K+ ANWIM DIAA++
Sbjct: 361 LPELPEIKRRRYEQMGLSMQDVLFLANDKNIADFFDATLAKGADPKLVANWIMSDIAAFM 420
Query: 1264 NNEKLSIDEIKLTPEELSELIASIRGGVISGKIGKEILF 1380
NEKL+I+EIKLTPEELSELIASI+GG IS KIGKEILF
Sbjct: 421 KNEKLTINEIKLTPEELSELIASIKGGTISSKIGKEILF 459