BLASTX nr result

ID: Coptis24_contig00013861 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013861
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155958.1| PREDICTED: AT-rich interactive domain-contai...    76   3e-12
ref|XP_004141824.1| PREDICTED: AT-rich interactive domain-contai...    76   3e-12
gb|EEC83666.1| hypothetical protein OsI_29439 [Oryza sativa Indi...    73   3e-11
ref|NP_001061946.1| Os08g0451400 [Oryza sativa Japonica Group] g...    73   3e-11
ref|XP_003627434.1| Fiber protein Fb21 [Medicago truncatula] gi|...    72   5e-11

>ref|XP_004155958.1| PREDICTED: AT-rich interactive domain-containing protein 4-like
           [Cucumis sativus]
          Length = 781

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/57 (63%), Positives = 44/57 (77%)
 Frame = +3

Query: 99  KDKQEDVKRYPFPELTSSGCLEVQTLINPTIDEFRQVMESLKPNMVYLLGEQLVNEE 269
           KD  ED +RYPFP+L SSG LEVQ L NP+ D+F + +ES KPN+VYL GEQL N+E
Sbjct: 30  KDNPEDQQRYPFPQLNSSGRLEVQVLSNPSKDQFCRTLESYKPNIVYLQGEQLENDE 86


>ref|XP_004141824.1| PREDICTED: AT-rich interactive domain-containing protein 4-like
           [Cucumis sativus]
          Length = 781

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/57 (63%), Positives = 44/57 (77%)
 Frame = +3

Query: 99  KDKQEDVKRYPFPELTSSGCLEVQTLINPTIDEFRQVMESLKPNMVYLLGEQLVNEE 269
           KD  ED +RYPFP+L SSG LEVQ L NP+ D+F + +ES KPN+VYL GEQL N+E
Sbjct: 30  KDNPEDQQRYPFPQLNSSGRLEVQVLSNPSKDQFCRTLESYKPNIVYLQGEQLENDE 86


>gb|EEC83666.1| hypothetical protein OsI_29439 [Oryza sativa Indica Group]
          Length = 761

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 37/70 (52%), Positives = 51/70 (72%), Gaps = 11/70 (15%)
 Frame = +3

Query: 93  RLKDKQE-------DVKR----YPFPELTSSGCLEVQTLINPTIDEFRQVMESLKPNMVY 239
           ++ DKQ+       +VKR    YPFPEL SSG LEV TLINPT+D+FR+  ++++PN++Y
Sbjct: 21  KVTDKQQKPPGLVPEVKRPRLSYPFPELISSGRLEVHTLINPTVDQFRKAQQAVQPNLMY 80

Query: 240 LLGEQLVNEE 269
           L G+QL NEE
Sbjct: 81  LQGQQLENEE 90


>ref|NP_001061946.1| Os08g0451400 [Oryza sativa Japonica Group]
           gi|113623915|dbj|BAF23860.1| Os08g0451400 [Oryza sativa
           Japonica Group] gi|222640662|gb|EEE68794.1| hypothetical
           protein OsJ_27533 [Oryza sativa Japonica Group]
          Length = 761

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 37/70 (52%), Positives = 51/70 (72%), Gaps = 11/70 (15%)
 Frame = +3

Query: 93  RLKDKQE-------DVKR----YPFPELTSSGCLEVQTLINPTIDEFRQVMESLKPNMVY 239
           ++ DKQ+       +VKR    YPFPEL SSG LEV TLINPT+D+FR+  ++++PN++Y
Sbjct: 21  KVTDKQQKPPGLVPEVKRPRLSYPFPELISSGRLEVHTLINPTVDQFRKAQQAVQPNLMY 80

Query: 240 LLGEQLVNEE 269
           L G+QL NEE
Sbjct: 81  LQGQQLENEE 90


>ref|XP_003627434.1| Fiber protein Fb21 [Medicago truncatula]
           gi|355521456|gb|AET01910.1| Fiber protein Fb21 [Medicago
           truncatula]
          Length = 769

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/53 (62%), Positives = 43/53 (81%)
 Frame = +3

Query: 111 EDVKRYPFPELTSSGCLEVQTLINPTIDEFRQVMESLKPNMVYLLGEQLVNEE 269
           ++ ++YPFPEL SSG LEVQTL NP  ++FR+V+ES KPN VY  GEQL++EE
Sbjct: 32  QNQQKYPFPELVSSGRLEVQTLCNPEKEQFRKVLESCKPNFVYFQGEQLLDEE 84


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