BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013850
         (2020 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24510.3| unnamed protein product [Vitis vinifera]              914   0.0  
ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation spec...   914   0.0  
ref|XP_004169296.1| PREDICTED: cleavage and polyadenylation spec...   870   0.0  
ref|XP_004152876.1| PREDICTED: cleavage and polyadenylation spec...   870   0.0  
ref|XP_002510905.1| cleavage and polyadenylation specificity fac...   862   0.0  

>emb|CBI24510.3| unnamed protein product [Vitis vinifera]
          Length = 1448

 Score =  914 bits (2363), Expect = 0.0
 Identities = 441/514 (85%), Positives = 484/514 (94%)
 Frame = +2

Query: 2    KNVGGYQGLFLSGYRPTWFMVCRERLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGF 181
            KN+GG QGLFLSG RP WFMV RER+RVHPQLCDGSIVAFTVLHN+NCNHGLIYVTSQGF
Sbjct: 935  KNIGGCQGLFLSGSRPLWFMVFRERIRVHPQLCDGSIVAFTVLHNINCNHGLIYVTSQGF 994

Query: 182  LKICQLPSVLNYDNYWPVQKIPLKATPHQVTYFAEKSLYPLIVSVPVVKPLNQVLSSLVD 361
            LKICQLP+V +YDNYWPVQKIPLK TPHQVTYFAEK+LYPLIVSVPV+KPLN VLSSLVD
Sbjct: 995  LKICQLPAVSSYDNYWPVQKIPLKGTPHQVTYFAEKNLYPLIVSVPVLKPLNHVLSSLVD 1054

Query: 362  QDAGQQMEHDNLTSDELHTTYTTEEFEVRILEPEKSGGPWQTRARISMQNSENALTVRMV 541
            Q+AG Q+E+DNL+SDELH +Y+ +EFEVR+LEPEKSG PWQTRA I MQ+SENALTVR+V
Sbjct: 1055 QEAGHQLENDNLSSDELHRSYSVDEFEVRVLEPEKSGAPWQTRATIPMQSSENALTVRVV 1114

Query: 542  TLFNTTTKENETLLAIGTAYVQGEDVAARGRILLFSLGRNTDNSQDLVSEVYSKELKGAI 721
            TLFNTTTKENETLLAIGTAYVQGEDVAARGR+LLFS+G+NTDNSQ+LVSE+YSKELKGAI
Sbjct: 1115 TLFNTTTKENETLLAIGTAYVQGEDVAARGRVLLFSVGKNTDNSQNLVSEIYSKELKGAI 1174

Query: 722  SALAPLQGHLLIASGPKVTLHDWTGSELNAVAFYDAPPLHVVSLNIVKNFILVGDIHKSI 901
            SA+A LQGHLLIASGPK+ LH WTG+ELN VAF+DAPPL+VVSLNIVKNFIL+GDIH+SI
Sbjct: 1175 SAVASLQGHLLIASGPKIILHKWTGTELNGVAFFDAPPLYVVSLNIVKNFILLGDIHRSI 1234

Query: 902  YFLSWKEQGAQLTLLAKDFGNLDCFSTEFLIDGSTLSLVVSDEQKNVQIFYYAPKTSESW 1081
            YFLSWKEQGAQL LLAKDFG+LDCF+TEFLIDGSTLSL+VSD+QKN+QIFYYAPK SESW
Sbjct: 1235 YFLSWKEQGAQLNLLAKDFGSLDCFATEFLIDGSTLSLIVSDDQKNIQIFYYAPKMSESW 1294

Query: 1082 KGSKLLPRAEFHIGAHVTKFLRLQMRPTSSDRTNGTSGSDKTNRFALLFGTLDGSVGCIA 1261
            KG KLL RAEFH+GAHVTKFLRLQM P SSDRT+ T GSDKTNRFALLFGTLDGS+GCIA
Sbjct: 1295 KGQKLLSRAEFHVGAHVTKFLRLQMLPASSDRTSATQGSDKTNRFALLFGTLDGSIGCIA 1354

Query: 1262 PLDELTFRRLQTLQKKLVDAVPHTGGLNPRSFRQFHTNGKAHRPGPENMVDCELLCHYEM 1441
            PLDELTFRRLQ+LQKKLVDAVPH  GLNPRSFRQF +NGKAHRPGP+N+VDCELLCHYEM
Sbjct: 1355 PLDELTFRRLQSLQKKLVDAVPHVAGLNPRSFRQFRSNGKAHRPGPDNIVDCELLCHYEM 1414

Query: 1442 LPFEDQLEIAHQIGTTRGQILTNLNDLSLGTSFL 1543
            LPFE+QLEIA QIGTTR QIL+NLNDLSLGTSFL
Sbjct: 1415 LPFEEQLEIAQQIGTTRMQILSNLNDLSLGTSFL 1448


>ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Vitis vinifera]
          Length = 1442

 Score =  914 bits (2363), Expect = 0.0
 Identities = 441/514 (85%), Positives = 484/514 (94%)
 Frame = +2

Query: 2    KNVGGYQGLFLSGYRPTWFMVCRERLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGF 181
            KN+GG QGLFLSG RP WFMV RER+RVHPQLCDGSIVAFTVLHN+NCNHGLIYVTSQGF
Sbjct: 929  KNIGGCQGLFLSGSRPLWFMVFRERIRVHPQLCDGSIVAFTVLHNINCNHGLIYVTSQGF 988

Query: 182  LKICQLPSVLNYDNYWPVQKIPLKATPHQVTYFAEKSLYPLIVSVPVVKPLNQVLSSLVD 361
            LKICQLP+V +YDNYWPVQKIPLK TPHQVTYFAEK+LYPLIVSVPV+KPLN VLSSLVD
Sbjct: 989  LKICQLPAVSSYDNYWPVQKIPLKGTPHQVTYFAEKNLYPLIVSVPVLKPLNHVLSSLVD 1048

Query: 362  QDAGQQMEHDNLTSDELHTTYTTEEFEVRILEPEKSGGPWQTRARISMQNSENALTVRMV 541
            Q+AG Q+E+DNL+SDELH +Y+ +EFEVR+LEPEKSG PWQTRA I MQ+SENALTVR+V
Sbjct: 1049 QEAGHQLENDNLSSDELHRSYSVDEFEVRVLEPEKSGAPWQTRATIPMQSSENALTVRVV 1108

Query: 542  TLFNTTTKENETLLAIGTAYVQGEDVAARGRILLFSLGRNTDNSQDLVSEVYSKELKGAI 721
            TLFNTTTKENETLLAIGTAYVQGEDVAARGR+LLFS+G+NTDNSQ+LVSE+YSKELKGAI
Sbjct: 1109 TLFNTTTKENETLLAIGTAYVQGEDVAARGRVLLFSVGKNTDNSQNLVSEIYSKELKGAI 1168

Query: 722  SALAPLQGHLLIASGPKVTLHDWTGSELNAVAFYDAPPLHVVSLNIVKNFILVGDIHKSI 901
            SA+A LQGHLLIASGPK+ LH WTG+ELN VAF+DAPPL+VVSLNIVKNFIL+GDIH+SI
Sbjct: 1169 SAVASLQGHLLIASGPKIILHKWTGTELNGVAFFDAPPLYVVSLNIVKNFILLGDIHRSI 1228

Query: 902  YFLSWKEQGAQLTLLAKDFGNLDCFSTEFLIDGSTLSLVVSDEQKNVQIFYYAPKTSESW 1081
            YFLSWKEQGAQL LLAKDFG+LDCF+TEFLIDGSTLSL+VSD+QKN+QIFYYAPK SESW
Sbjct: 1229 YFLSWKEQGAQLNLLAKDFGSLDCFATEFLIDGSTLSLIVSDDQKNIQIFYYAPKMSESW 1288

Query: 1082 KGSKLLPRAEFHIGAHVTKFLRLQMRPTSSDRTNGTSGSDKTNRFALLFGTLDGSVGCIA 1261
            KG KLL RAEFH+GAHVTKFLRLQM P SSDRT+ T GSDKTNRFALLFGTLDGS+GCIA
Sbjct: 1289 KGQKLLSRAEFHVGAHVTKFLRLQMLPASSDRTSATQGSDKTNRFALLFGTLDGSIGCIA 1348

Query: 1262 PLDELTFRRLQTLQKKLVDAVPHTGGLNPRSFRQFHTNGKAHRPGPENMVDCELLCHYEM 1441
            PLDELTFRRLQ+LQKKLVDAVPH  GLNPRSFRQF +NGKAHRPGP+N+VDCELLCHYEM
Sbjct: 1349 PLDELTFRRLQSLQKKLVDAVPHVAGLNPRSFRQFRSNGKAHRPGPDNIVDCELLCHYEM 1408

Query: 1442 LPFEDQLEIAHQIGTTRGQILTNLNDLSLGTSFL 1543
            LPFE+QLEIA QIGTTR QIL+NLNDLSLGTSFL
Sbjct: 1409 LPFEEQLEIAQQIGTTRMQILSNLNDLSLGTSFL 1442


>ref|XP_004169296.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like, partial [Cucumis sativus]
          Length = 741

 Score =  870 bits (2247), Expect = 0.0
 Identities = 422/514 (82%), Positives = 467/514 (90%)
 Frame = +2

Query: 2    KNVGGYQGLFLSGYRPTWFMVCRERLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGF 181
            KN+ GYQGLFL G RP WFMV RERLRVHPQLCDG IVAF VLHNVNCNHGLIYVTSQG 
Sbjct: 230  KNISGYQGLFLCGSRPAWFMVFRERLRVHPQLCDGPIVAFAVLHNVNCNHGLIYVTSQGV 289

Query: 182  LKICQLPSVLNYDNYWPVQKIPLKATPHQVTYFAEKSLYPLIVSVPVVKPLNQVLSSLVD 361
            LKICQLPS  NYDNYWPVQK+PLK TPHQVTYF EK+LYP+I+S PV KPLNQVLSS+VD
Sbjct: 290  LKICQLPSTSNYDNYWPVQKVPLKGTPHQVTYFHEKNLYPVIISAPVQKPLNQVLSSMVD 349

Query: 362  QDAGQQMEHDNLTSDELHTTYTTEEFEVRILEPEKSGGPWQTRARISMQNSENALTVRMV 541
            QD G  +E+ NL++DEL  TY+ EEFE+RILEPEKSGGPWQTRA I+M +SENALT+R+V
Sbjct: 350  QDVGH-VENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVV 408

Query: 542  TLFNTTTKENETLLAIGTAYVQGEDVAARGRILLFSLGRNTDNSQDLVSEVYSKELKGAI 721
            TL NTTTKENETLLA+GTAYVQGEDVAARGR+LLFS+G++ DNSQ LVSEVYSKELKGAI
Sbjct: 409  TLLNTTTKENETLLAVGTAYVQGEDVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAI 468

Query: 722  SALAPLQGHLLIASGPKVTLHDWTGSELNAVAFYDAPPLHVVSLNIVKNFILVGDIHKSI 901
            SALA LQGHLLIASGPK+ LH WTG+ELN +AFYD PPL+VVSLNIVKNFIL+GDIHKSI
Sbjct: 469  SALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSI 528

Query: 902  YFLSWKEQGAQLTLLAKDFGNLDCFSTEFLIDGSTLSLVVSDEQKNVQIFYYAPKTSESW 1081
            YFLSWKEQGAQL+LLAKDFG+LDC++TEFLIDGSTLSL VSD+QKN+QIFYYAPK++ESW
Sbjct: 529  YFLSWKEQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESW 588

Query: 1082 KGSKLLPRAEFHIGAHVTKFLRLQMRPTSSDRTNGTSGSDKTNRFALLFGTLDGSVGCIA 1261
            KG KLL RAEFH+GAHVTKFLRLQM  TSSD+   T  SDKTNRFALLFGTLDGS+GCIA
Sbjct: 589  KGQKLLSRAEFHVGAHVTKFLRLQMLSTSSDKACSTV-SDKTNRFALLFGTLDGSIGCIA 647

Query: 1262 PLDELTFRRLQTLQKKLVDAVPHTGGLNPRSFRQFHTNGKAHRPGPENMVDCELLCHYEM 1441
            PLDELTFRRLQ+LQKKL DAVPH GGLNPRSFRQFH+NGK HR GP+++VDCELLCHYEM
Sbjct: 648  PLDELTFRRLQSLQKKLGDAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEM 707

Query: 1442 LPFEDQLEIAHQIGTTRGQILTNLNDLSLGTSFL 1543
            LP E+QL+IAHQIGTTR QIL+NLNDLSLGTSFL
Sbjct: 708  LPLEEQLDIAHQIGTTRSQILSNLNDLSLGTSFL 741


>ref|XP_004152876.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Cucumis sativus]
          Length = 1504

 Score =  870 bits (2247), Expect = 0.0
 Identities = 422/514 (82%), Positives = 467/514 (90%)
 Frame = +2

Query: 2    KNVGGYQGLFLSGYRPTWFMVCRERLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGF 181
            KN+ GYQGLFL G RP WFMV RERLRVHPQLCDG IVAF VLHNVNCNHGLIYVTSQG 
Sbjct: 993  KNISGYQGLFLCGSRPAWFMVFRERLRVHPQLCDGPIVAFAVLHNVNCNHGLIYVTSQGV 1052

Query: 182  LKICQLPSVLNYDNYWPVQKIPLKATPHQVTYFAEKSLYPLIVSVPVVKPLNQVLSSLVD 361
            LKICQLPS  NYDNYWPVQK+PLK TPHQVTYF EK+LYP+I+S PV KPLNQVLSS+VD
Sbjct: 1053 LKICQLPSTSNYDNYWPVQKVPLKGTPHQVTYFHEKNLYPVIISAPVQKPLNQVLSSMVD 1112

Query: 362  QDAGQQMEHDNLTSDELHTTYTTEEFEVRILEPEKSGGPWQTRARISMQNSENALTVRMV 541
            QD G  +E+ NL++DEL  TY+ EEFE+RILEPEKSGGPWQTRA I+M +SENALT+R+V
Sbjct: 1113 QDVGH-VENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVV 1171

Query: 542  TLFNTTTKENETLLAIGTAYVQGEDVAARGRILLFSLGRNTDNSQDLVSEVYSKELKGAI 721
            TL NTTTKENETLLA+GTAYVQGEDVAARGR+LLFS+G++ DNSQ LVSEVYSKELKGAI
Sbjct: 1172 TLLNTTTKENETLLAVGTAYVQGEDVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAI 1231

Query: 722  SALAPLQGHLLIASGPKVTLHDWTGSELNAVAFYDAPPLHVVSLNIVKNFILVGDIHKSI 901
            SALA LQGHLLIASGPK+ LH WTG+ELN +AFYD PPL+VVSLNIVKNFIL+GDIHKSI
Sbjct: 1232 SALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSI 1291

Query: 902  YFLSWKEQGAQLTLLAKDFGNLDCFSTEFLIDGSTLSLVVSDEQKNVQIFYYAPKTSESW 1081
            YFLSWKEQGAQL+LLAKDFG+LDC++TEFLIDGSTLSL VSD+QKN+QIFYYAPK++ESW
Sbjct: 1292 YFLSWKEQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESW 1351

Query: 1082 KGSKLLPRAEFHIGAHVTKFLRLQMRPTSSDRTNGTSGSDKTNRFALLFGTLDGSVGCIA 1261
            KG KLL RAEFH+GAHVTKFLRLQM  TSSD+   T  SDKTNRFALLFGTLDGS+GCIA
Sbjct: 1352 KGQKLLSRAEFHVGAHVTKFLRLQMLSTSSDKACSTV-SDKTNRFALLFGTLDGSIGCIA 1410

Query: 1262 PLDELTFRRLQTLQKKLVDAVPHTGGLNPRSFRQFHTNGKAHRPGPENMVDCELLCHYEM 1441
            PLDELTFRRLQ+LQKKL DAVPH GGLNPRSFRQFH+NGK HR GP+++VDCELLCHYEM
Sbjct: 1411 PLDELTFRRLQSLQKKLGDAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEM 1470

Query: 1442 LPFEDQLEIAHQIGTTRGQILTNLNDLSLGTSFL 1543
            LP E+QL+IAHQIGTTR QIL+NLNDLSLGTSFL
Sbjct: 1471 LPLEEQLDIAHQIGTTRSQILSNLNDLSLGTSFL 1504


>ref|XP_002510905.1| cleavage and polyadenylation specificity factor cpsf, putative
            [Ricinus communis] gi|223550020|gb|EEF51507.1| cleavage
            and polyadenylation specificity factor cpsf, putative
            [Ricinus communis]
          Length = 1461

 Score =  862 bits (2226), Expect = 0.0
 Identities = 421/513 (82%), Positives = 462/513 (90%)
 Frame = +2

Query: 5    NVGGYQGLFLSGYRPTWFMVCRERLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGFL 184
            N+ G+QG FL G RP WFMV RERLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQG L
Sbjct: 949  NISGHQGFFLLGSRPAWFMVFRERLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGNL 1008

Query: 185  KICQLPSVLNYDNYWPVQKIPLKATPHQVTYFAEKSLYPLIVSVPVVKPLNQVLSSLVDQ 364
            KICQLPS  NYDNYWPVQKIPLK TPHQVTYF EK+LYPLIVSVPV KP+NQVLSSLVDQ
Sbjct: 1009 KICQLPSFSNYDNYWPVQKIPLKGTPHQVTYFPEKNLYPLIVSVPVHKPVNQVLSSLVDQ 1068

Query: 365  DAGQQMEHDNLTSDELHTTYTTEEFEVRILEPEKSGGPWQTRARISMQNSENALTVRMVT 544
            + G Q+E+ NL+SDEL  TY+ EEFEVRILE E  GGPWQT+A I MQ+SENALTVR+VT
Sbjct: 1069 EVGHQIENHNLSSDELLQTYSVEEFEVRILESENGGGPWQTKATIPMQSSENALTVRVVT 1128

Query: 545  LFNTTTKENETLLAIGTAYVQGEDVAARGRILLFSLGRNTDNSQDLVSEVYSKELKGAIS 724
            LFN TTKENETLLAIGTAYVQGEDVAARGR+LLFS+ ++T+NSQ LVSEVYSKELKGAIS
Sbjct: 1129 LFNATTKENETLLAIGTAYVQGEDVAARGRVLLFSVVKSTENSQVLVSEVYSKELKGAIS 1188

Query: 725  ALAPLQGHLLIASGPKVTLHDWTGSELNAVAFYDAPPLHVVSLNIVKNFILVGDIHKSIY 904
            ALA LQGHLLIASGPK+ LH WTG+ELN VAFYDAPPL+V S+NIVKNFIL+GDIHKSIY
Sbjct: 1189 ALASLQGHLLIASGPKIILHKWTGTELNGVAFYDAPPLYVASMNIVKNFILLGDIHKSIY 1248

Query: 905  FLSWKEQGAQLTLLAKDFGNLDCFSTEFLIDGSTLSLVVSDEQKNVQIFYYAPKTSESWK 1084
            FLSWKEQGAQL+LLAKDFG+LDCF+TEFLIDGSTLSLVVSDEQKN+QIFYYAPK  ESWK
Sbjct: 1249 FLSWKEQGAQLSLLAKDFGSLDCFATEFLIDGSTLSLVVSDEQKNIQIFYYAPKMLESWK 1308

Query: 1085 GSKLLPRAEFHIGAHVTKFLRLQMRPTSSDRTNGTSGSDKTNRFALLFGTLDGSVGCIAP 1264
            G KLL RAEFH+GAH+TKF+RL M  TSSDR+    G DKTNRFALLFGTLDGS+GCIAP
Sbjct: 1309 GQKLLSRAEFHVGAHITKFIRLSMLSTSSDRSGAAPGPDKTNRFALLFGTLDGSIGCIAP 1368

Query: 1265 LDELTFRRLQTLQKKLVDAVPHTGGLNPRSFRQFHTNGKAHRPGPENMVDCELLCHYEML 1444
            LDELTFRRLQ+LQ+KLVDAVPH  GLNPRSFRQF ++GK HRPGPE++VDCELL H+EML
Sbjct: 1369 LDELTFRRLQSLQRKLVDAVPHVAGLNPRSFRQFRSDGKVHRPGPESIVDCELLSHFEML 1428

Query: 1445 PFEDQLEIAHQIGTTRGQILTNLNDLSLGTSFL 1543
            P E+QLEIA Q+GTTR QIL+NLNDLSLGTSFL
Sbjct: 1429 PLEEQLEIAQQVGTTRAQILSNLNDLSLGTSFL 1461